Miyakogusa Predicted Gene
- Lj0g3v0300879.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0300879.1 Non Characterized Hit- tr|A3A9U0|A3A9U0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,29.03,9e-19,seg,NULL,CUFF.20223.1
(288 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g446310.1 | transmembrane protein, putative | HC | chr7:15... 162 4e-40
Medtr7g446310.2 | transmembrane protein, putative | HC | chr7:15... 162 4e-40
Medtr6g007370.1 | transmembrane protein, putative | HC | chr6:15... 162 4e-40
Medtr4g012520.1 | transmembrane protein, putative | HC | chr4:32... 66 4e-11
>Medtr7g446310.1 | transmembrane protein, putative | HC |
chr7:15733416-15734913 | 20130731
Length = 241
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 152/281 (54%), Gaps = 65/281 (23%)
Query: 16 ILEQGSDRIAFITGRVQTLXXXXXXXXXXXXXXXXXXXXXNTALXXXXXTGSYPHSNSPL 75
IL+QGSDR+AFI G +QTL P
Sbjct: 16 ILQQGSDRLAFIKGHIQTL---------------------------------------PP 36
Query: 76 CAVAEPDEDSISLLQNLDAAVETLIQSLPTVENEISTAPCSEIEPEL-VENPQAAP---P 131
PD S+ T + T +EI + P SEI+PE E+ Q P P
Sbjct: 37 TDFQNPDASETSITH-----TPTFPEQQHTQTDEILSFPDSEIQPEPEPEHVQLLPQTLP 91
Query: 132 DSSSLENSHYQNLQDHEQRFTII-PSDISSAINSSRGTRFFCSIIMAMWVIAAYGGLFSL 190
DS + E Q + + F I PSD+S+AI++S+ R CSII+A+ V+A+Y
Sbjct: 92 DSFN-EIPRQQTRAEEPRSFNFINPSDVSNAIDASKTIRLCCSIIVALLVVASY------ 144
Query: 191 LGIHLVKSVVIGFRPIYIVLLTNWSVVAARLFAGRQRGFGRLSRR---GSDETLASSGDW 247
LG+ L+K+V I FRP+Y+VLLTN + V ++L +G+QRG SRR G+D SS W
Sbjct: 145 LGLSLIKTV-ISFRPLYLVLLTNSTFVVSKLISGKQRGVNERSRRRLNGTD----SSDQW 199
Query: 248 -GAQLARTLEIGLLLQSVLDAVFMDCAVYAIVLVCGLSLLH 287
G QLA+TLEIGL+++SV+DAVFMDCAVYAIVL+C LS +H
Sbjct: 200 NGQQLAKTLEIGLVVKSVVDAVFMDCAVYAIVLICSLSFVH 240
>Medtr7g446310.2 | transmembrane protein, putative | HC |
chr7:15733428-15741228 | 20130731
Length = 241
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 152/281 (54%), Gaps = 65/281 (23%)
Query: 16 ILEQGSDRIAFITGRVQTLXXXXXXXXXXXXXXXXXXXXXNTALXXXXXTGSYPHSNSPL 75
IL+QGSDR+AFI G +QTL P
Sbjct: 16 ILQQGSDRLAFIKGHIQTL---------------------------------------PP 36
Query: 76 CAVAEPDEDSISLLQNLDAAVETLIQSLPTVENEISTAPCSEIEPEL-VENPQAAP---P 131
PD S+ T + T +EI + P SEI+PE E+ Q P P
Sbjct: 37 TDFQNPDASETSITH-----TPTFPEQQHTQTDEILSFPDSEIQPEPEPEHVQLLPQTLP 91
Query: 132 DSSSLENSHYQNLQDHEQRFTII-PSDISSAINSSRGTRFFCSIIMAMWVIAAYGGLFSL 190
DS + E Q + + F I PSD+S+AI++S+ R CSII+A+ V+A+Y
Sbjct: 92 DSFN-EIPRQQTRAEEPRSFNFINPSDVSNAIDASKTIRLCCSIIVALLVVASY------ 144
Query: 191 LGIHLVKSVVIGFRPIYIVLLTNWSVVAARLFAGRQRGFGRLSRR---GSDETLASSGDW 247
LG+ L+K+V I FRP+Y+VLLTN + V ++L +G+QRG SRR G+D SS W
Sbjct: 145 LGLSLIKTV-ISFRPLYLVLLTNSTFVVSKLISGKQRGVNERSRRRLNGTD----SSDQW 199
Query: 248 -GAQLARTLEIGLLLQSVLDAVFMDCAVYAIVLVCGLSLLH 287
G QLA+TLEIGL+++SV+DAVFMDCAVYAIVL+C LS +H
Sbjct: 200 NGQQLAKTLEIGLVVKSVVDAVFMDCAVYAIVLICSLSFVH 240
>Medtr6g007370.1 | transmembrane protein, putative | HC |
chr6:1582745-1579309 | 20130731
Length = 241
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 152/281 (54%), Gaps = 65/281 (23%)
Query: 16 ILEQGSDRIAFITGRVQTLXXXXXXXXXXXXXXXXXXXXXNTALXXXXXTGSYPHSNSPL 75
IL+QGSDR+AFI G +QTL P
Sbjct: 16 ILQQGSDRLAFIKGHIQTL---------------------------------------PP 36
Query: 76 CAVAEPDEDSISLLQNLDAAVETLIQSLPTVENEISTAPCSEIEPEL-VENPQAAP---P 131
PD S+ T + T +EI + P SEI+PE E+ Q P P
Sbjct: 37 TDFQNPDASETSITH-----TPTFPEQQHTQTDEILSFPDSEIQPEPEPEHVQLLPQTLP 91
Query: 132 DSSSLENSHYQNLQDHEQRFTII-PSDISSAINSSRGTRFFCSIIMAMWVIAAYGGLFSL 190
DS + E Q + + F I PSD+S+AI++S+ R CSII+A+ V+A+Y
Sbjct: 92 DSFN-EIPRQQTRAEEPRSFNFINPSDVSNAIDASKTIRLCCSIIVALLVVASY------ 144
Query: 191 LGIHLVKSVVIGFRPIYIVLLTNWSVVAARLFAGRQRGFGRLSRR---GSDETLASSGDW 247
LG+ L+K+V I FRP+Y+VLLTN + V ++L +G+QRG SRR G+D SS W
Sbjct: 145 LGLSLIKTV-ISFRPLYLVLLTNSTFVVSKLISGKQRGVNERSRRRLNGTD----SSDQW 199
Query: 248 -GAQLARTLEIGLLLQSVLDAVFMDCAVYAIVLVCGLSLLH 287
G QLA+TLEIGL+++SV+DAVFMDCAVYAIVL+C LS +H
Sbjct: 200 NGQQLAKTLEIGLVVKSVVDAVFMDCAVYAIVLICSLSFVH 240
>Medtr4g012520.1 | transmembrane protein, putative | HC |
chr4:3245940-3247640 | 20130731
Length = 288
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 21/179 (11%)
Query: 116 SEIEPELVENPQAAPPDSSSLE------NSHYQNLQDHEQRFTIIPS-DISSAINSSRGT 168
SE EP L+++ +A +SSS N++ + +R T S +++ I +S T
Sbjct: 123 SEDEP-LIQDSKAKETESSSRPKQTGSLNTNQAKKPHNWRRHTFFSSRELNFCILTSENT 181
Query: 169 RFFCSIIMAMWVIAAYGGLFSLLGIHLVKSV-VIGFRPIYIVLLTNWSVVAARLFAGRQR 227
R S+I+A+ V+ Y L+ S ++ RP+YIVL+T+ ++V AR+++ + R
Sbjct: 182 RALSSLIIALLVVFYY----------LISSKSILASRPLYIVLVTDVTIVIARIYSEKAR 231
Query: 228 GFGRLSRRGSDETLASSGDWGAQLARTLEIGLLLQSVLDAVFMDCAVYAIVLVCGLSLL 286
+G A G + LE GL++ + VF+DC++Y +V+VC +S++
Sbjct: 232 VLEE--NKGEMVEAAEDGRSWNDAVKLLERGLVVYQAIKGVFIDCSIYLVVVVCCISIM 288