Miyakogusa Predicted Gene

Lj0g3v0300119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300119.1 tr|B9PB02|B9PB02_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_581281 PE=4
SV=1,59.15,3e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,NULL; Acetyl-CoA synthetase-like,NUL,47013_g.1
         (79 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g008800.2 | long-chain acyl-CoA synthetase | HC | chr5:192...   116   5e-27
Medtr5g008800.1 | long-chain acyl-CoA synthetase | HC | chr5:193...   116   5e-27
Medtr5g008820.1 | fatty acyl-CoA synthetase family protein | HC ...   114   2e-26
Medtr8g074040.1 | long-chain acyl-CoA synthetase | HC | chr8:313...    88   1e-18
Medtr5g076240.1 | long-chain acyl-CoA synthetase | HC | chr5:324...    86   6e-18
Medtr5g023730.1 | fatty acyl-CoA synthetase family protein | HC ...    72   1e-13
Medtr3g064420.1 | long-chain acyl-CoA synthetase | HC | chr3:290...    70   3e-13
Medtr5g076220.1 | long-chain acyl-CoA synthetase | HC | chr5:324...    70   6e-13
Medtr5g076200.1 | long-chain acyl-CoA synthetase | HC | chr5:324...    69   1e-12
Medtr0161s0050.1 | long-chain acyl-CoA synthetase | HC | scaffol...    67   4e-12
Medtr2g044180.1 | acetate/butyrate-CoA ligase AAE7, peroxisomal ...    65   2e-11
Medtr4g121600.1 | acetate/butyrate-CoA ligase AAE7, peroxisomal ...    63   6e-11

>Medtr5g008800.2 | long-chain acyl-CoA synthetase | HC |
          chr5:1929920-1927424 | 20130731
          Length = 551

 Score =  116 bits (290), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/67 (79%), Positives = 60/67 (89%)

Query: 1  MEGVMQCSANYVPLTPITFLERSAIVYPNSPSVVFSDVTYTWSQTHQRCTKLASSISQLG 60
          MEG +QC+ANYVPLTPI+FLERSAIVY N  S++++DVTYTWSQTHQRC KLASSISQLG
Sbjct: 1  MEGTIQCNANYVPLTPISFLERSAIVYSNKVSIIYNDVTYTWSQTHQRCIKLASSISQLG 60

Query: 61 VSPGDVV 67
          VSP  VV
Sbjct: 61 VSPHHVV 67


>Medtr5g008800.1 | long-chain acyl-CoA synthetase | HC |
          chr5:1930680-1927444 | 20130731
          Length = 551

 Score =  116 bits (290), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/67 (79%), Positives = 60/67 (89%)

Query: 1  MEGVMQCSANYVPLTPITFLERSAIVYPNSPSVVFSDVTYTWSQTHQRCTKLASSISQLG 60
          MEG +QC+ANYVPLTPI+FLERSAIVY N  S++++DVTYTWSQTHQRC KLASSISQLG
Sbjct: 1  MEGTIQCNANYVPLTPISFLERSAIVYSNKVSIIYNDVTYTWSQTHQRCIKLASSISQLG 60

Query: 61 VSPGDVV 67
          VSP  VV
Sbjct: 61 VSPHHVV 67


>Medtr5g008820.1 | fatty acyl-CoA synthetase family protein | HC |
          chr5:1947990-1945768 | 20130731
          Length = 548

 Score =  114 bits (286), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 52/68 (76%), Positives = 60/68 (88%)

Query: 1  MEGVMQCSANYVPLTPITFLERSAIVYPNSPSVVFSDVTYTWSQTHQRCTKLASSISQLG 60
          MEG ++C+ANYVPLTPI+FLERSAIVY +  S+++ DVTYTWSQTHQRC KLASSISQLG
Sbjct: 1  MEGSIKCNANYVPLTPISFLERSAIVYSDKVSIIYGDVTYTWSQTHQRCIKLASSISQLG 60

Query: 61 VSPGDVVC 68
          VSP DVV 
Sbjct: 61 VSPNDVVA 68


>Medtr8g074040.1 | long-chain acyl-CoA synthetase | HC |
           chr8:31314886-31318985 | 20130731
          Length = 607

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 51/68 (75%)

Query: 1   MEGVMQCSANYVPLTPITFLERSAIVYPNSPSVVFSDVTYTWSQTHQRCTKLASSISQLG 60
           M+G++ C AN VPL+PI FLER+A V  +  S+V+  + Y W QTHQRC KLASS++QLG
Sbjct: 43  MQGLVHCHANSVPLSPINFLERAAKVCRDRTSLVYGSLKYNWGQTHQRCLKLASSLTQLG 102

Query: 61  VSPGDVVC 68
           +S GDVV 
Sbjct: 103 ISRGDVVA 110


>Medtr5g076240.1 | long-chain acyl-CoA synthetase | HC |
          chr5:32473674-32471164 | 20130731
          Length = 562

 Score = 86.3 bits (212), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 53/67 (79%)

Query: 1  MEGVMQCSANYVPLTPITFLERSAIVYPNSPSVVFSDVTYTWSQTHQRCTKLASSISQLG 60
          M+ +    AN  PLTP+TFLER++ +YPN+PS++++D  +TWSQTH+RC +LAS+I+ LG
Sbjct: 1  MDQLKPTQANNSPLTPLTFLERTSTIYPNTPSIIYNDTVFTWSQTHKRCLQLASAITSLG 60

Query: 61 VSPGDVV 67
          +  G+VV
Sbjct: 61 IRRGNVV 67


>Medtr5g023730.1 | fatty acyl-CoA synthetase family protein | HC |
          chr5:9424158-9429907 | 20130731
          Length = 550

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/68 (45%), Positives = 53/68 (77%), Gaps = 2/68 (2%)

Query: 2  EGVMQCS-ANYVPLTPITFLERSAIVYPNSPSVVFSD-VTYTWSQTHQRCTKLASSISQL 59
          + +++CS  +++PLTPI FLER+A VY +  S++++D V ++W +T++RC KLAS++  L
Sbjct: 3  QDLVECSKGSHIPLTPICFLERAATVYGDKVSIIYNDHVRFSWRETYERCLKLASALVNL 62

Query: 60 GVSPGDVV 67
          G+S GD+V
Sbjct: 63 GISNGDIV 70


>Medtr3g064420.1 | long-chain acyl-CoA synthetase | HC |
          chr3:29005671-29003098 | 20130731
          Length = 582

 Score = 70.5 bits (171), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/67 (46%), Positives = 44/67 (65%)

Query: 1  MEGVMQCSANYVPLTPITFLERSAIVYPNSPSVVFSDVTYTWSQTHQRCTKLASSISQLG 60
          M+ + +C ANY  LTP+TFL R++  Y N  SV+     +TWSQT+ RC +LASS+  L 
Sbjct: 1  MDNLPKCRANYTILTPLTFLMRASASYANRTSVIHEGTRFTWSQTYDRCRRLASSLRALN 60

Query: 61 VSPGDVV 67
          ++  DVV
Sbjct: 61 IAKNDVV 67


>Medtr5g076220.1 | long-chain acyl-CoA synthetase | HC |
          chr5:32463725-32465416 | 20130731
          Length = 563

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 52/67 (77%)

Query: 1  MEGVMQCSANYVPLTPITFLERSAIVYPNSPSVVFSDVTYTWSQTHQRCTKLASSISQLG 60
          M+ + +  AN   LTP+TFLER+A VY NS S+++++ ++TWSQTH+RC +LASS+S LG
Sbjct: 1  MDQLTRNQANSTALTPLTFLERAATVYGNSISIIYNNTSFTWSQTHKRCLQLASSLSSLG 60

Query: 61 VSPGDVV 67
          +  GDVV
Sbjct: 61 IQKGDVV 67


>Medtr5g076200.1 | long-chain acyl-CoA synthetase | HC |
          chr5:32457410-32455719 | 20130731
          Length = 563

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 51/67 (76%)

Query: 1  MEGVMQCSANYVPLTPITFLERSAIVYPNSPSVVFSDVTYTWSQTHQRCTKLASSISQLG 60
          M  + +  AN   LTP+TFLER+A VY NS S+++++ ++TWSQTH+RC +LASS+S LG
Sbjct: 1  MNQLTRNQANSTALTPLTFLERAATVYGNSISIIYNNTSFTWSQTHKRCLQLASSLSSLG 60

Query: 61 VSPGDVV 67
          +  GDVV
Sbjct: 61 IQKGDVV 67


>Medtr0161s0050.1 | long-chain acyl-CoA synthetase | HC |
          scaffold0161:23112-24983 | 20130731
          Length = 569

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 50/67 (74%)

Query: 1  MEGVMQCSANYVPLTPITFLERSAIVYPNSPSVVFSDVTYTWSQTHQRCTKLASSISQLG 60
          M  + +  AN  PLTP+TFL+R+A VY NS S++++  ++TW QTH+RC +LASS+S LG
Sbjct: 1  MNQITRNQANSTPLTPLTFLDRAATVYGNSISIIYNSTSFTWFQTHKRCLQLASSLSSLG 60

Query: 61 VSPGDVV 67
          +  GDVV
Sbjct: 61 IVKGDVV 67


>Medtr2g044180.1 | acetate/butyrate-CoA ligase AAE7, peroxisomal
          protein | HC | chr2:19206704-19214205 | 20130731
          Length = 566

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 40/61 (65%)

Query: 8  SANYVPLTPITFLERSAIVYPNSPSVVFSDVTYTWSQTHQRCTKLASSISQLGVSPGDVV 67
          +ANY  LTP+ FLER+A V+PN  S++     YTW QT+QRC + AS++S   +  G+ V
Sbjct: 14 TANYTALTPLWFLERAAKVHPNRKSLIHGSCHYTWHQTYQRCCRFASALSNYSIGLGNTV 73

Query: 68 C 68
           
Sbjct: 74 A 74


>Medtr4g121600.1 | acetate/butyrate-CoA ligase AAE7, peroxisomal
          protein | HC | chr4:50258339-50255222 | 20130731
          Length = 566

 Score = 62.8 bits (151), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/60 (45%), Positives = 40/60 (66%)

Query: 8  SANYVPLTPITFLERSAIVYPNSPSVVFSDVTYTWSQTHQRCTKLASSISQLGVSPGDVV 67
          +ANY  LTP+ FLER+A V+P   S++     YTW QT+QRC + AS++S   ++ G+ V
Sbjct: 14 AANYTSLTPLWFLERAAQVHPTRKSIIHGSRHYTWRQTYQRCRRFASALSNRSIALGNTV 73