Miyakogusa Predicted Gene
- Lj0g3v0299959.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0299959.2 Non Characterized Hit- tr|I1LVC6|I1LVC6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,93.68,0,WD_REPEATS_1,WD40 repeat, conserved site; SUBFAMILY NOT
NAMED,NULL; WD40 REPEAT PROTEIN,NULL; WD40,W,CUFF.20154.2
(285 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g037340.1 | transducin/WD40 repeat protein | HC | chr8:139... 532 e-151
Medtr8g037340.2 | transducin/WD40 repeat protein | HC | chr8:139... 517 e-147
Medtr1g072140.1 | transducin/WD40 repeat protein | HC | chr1:320... 92 4e-19
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 74 2e-13
Medtr8g092890.1 | transducin/WD-like repeat-protein | HC | chr8:... 64 2e-10
Medtr8g100005.1 | transducin/WD40 repeat protein | HC | chr8:423... 63 4e-10
Medtr8g100005.2 | transducin/WD40 repeat protein | HC | chr8:423... 63 4e-10
Medtr8g100005.3 | transducin/WD40 repeat protein | HC | chr8:423... 62 7e-10
Medtr3g491920.1 | transducin/WD40 repeat protein | HC | chr3:418... 61 1e-09
Medtr4g123597.1 | transducin family protein/WD-40 repeat protein... 60 3e-09
Medtr1g007740.1 | transducin/WD40 repeat protein | HC | chr1:529... 60 3e-09
Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protei... 59 4e-09
Medtr3g106080.1 | TBP-associated factor 5 | HC | chr3:48932864-4... 57 2e-08
Medtr2g079740.1 | transducin/WD-like repeat-protein | HC | chr2:... 56 3e-08
Medtr4g113080.1 | LisH-SSDP-WD40 | LC | chr4:46463876-46455979 |... 55 7e-08
Medtr3g107910.1 | transcriptional corepressor leunig-like protei... 55 1e-07
Medtr3g107910.2 | transcriptional corepressor leunig-like protei... 55 1e-07
Medtr1g011610.1 | transcriptional corepressor leunig-like protei... 54 2e-07
Medtr1g011610.2 | transcriptional corepressor leunig-like protei... 54 2e-07
Medtr2g086140.1 | histone transcription regulator HIRA protein |... 54 3e-07
Medtr7g060420.1 | transducin/WD-like repeat-protein | HC | chr7:... 52 5e-07
Medtr2g012630.1 | katanin p80 WD40 repeat subunit B1-like protei... 51 2e-06
Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protei... 51 2e-06
Medtr4g053675.1 | histone transcription regulator HIRA protein |... 51 2e-06
Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC... 50 3e-06
Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC... 50 3e-06
Medtr5g085250.1 | E3 ubiquitin-protein ligase COP1 | HC | chr5:3... 49 6e-06
Medtr5g085250.2 | E3 ubiquitin-protein ligase COP1 | HC | chr5:3... 48 1e-05
>Medtr8g037340.1 | transducin/WD40 repeat protein | HC |
chr8:13935904-13944339 | 20130731
Length = 497
Score = 532 bits (1371), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/285 (89%), Positives = 266/285 (93%)
Query: 1 MHCIFDQCRASVTVLKFGHMSSDLLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFD 60
MHCIFDQC+ASVTV+KFGHMSSDLLAYGASDGTLTVCSVS+ PSVIKQLNGHSKD+TDFD
Sbjct: 173 MHCIFDQCKASVTVIKFGHMSSDLLAYGASDGTLTVCSVSEKPSVIKQLNGHSKDITDFD 232
Query: 61 FSSNNQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEIN 120
F+SNNQYIAS+SLDKTVRVWEI KG C+RVIYGVSSQLCIRFHPVNNNFLSVGNANKEIN
Sbjct: 233 FTSNNQYIASASLDKTVRVWEIEKGNCMRVIYGVSSQLCIRFHPVNNNFLSVGNANKEIN 292
Query: 121 VFNFSTGRVINKSVFDSEVTSMDHDHTGHLIFCGDAQGCIYSVNMNSHTGGLXXXXXXXX 180
VFNFSTGR INKSVFD+EVTSMDHDHTGHLIFCGDAQGCIYSVNMNSHTG L
Sbjct: 293 VFNFSTGRTINKSVFDAEVTSMDHDHTGHLIFCGDAQGCIYSVNMNSHTGILSRSHRHRS 352
Query: 181 XXXXXXPVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLTPRIH 240
PVTT+QYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLTPRIH
Sbjct: 353 SSKHRSPVTTMQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLTPRIH 412
Query: 241 KIQASFCPLLSLEKGEFIVSGSEDSNVYFYDLTKPKHTCVNKLQG 285
KIQASFCPLLSLEKGEFIV+GSEDSNVYFYDLTKPKHTCVNKLQG
Sbjct: 413 KIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTKPKHTCVNKLQG 457
>Medtr8g037340.2 | transducin/WD40 repeat protein | HC |
chr8:13935904-13944339 | 20130731
Length = 527
Score = 517 bits (1332), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/315 (81%), Positives = 266/315 (84%), Gaps = 30/315 (9%)
Query: 1 MHCIFDQCRASVTVLKFGHMSSDLLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFD 60
MHCIFDQC+ASVTV+KFGHMSSDLLAYGASDGTLTVCSVS+ PSVIKQLNGHSKD+TDFD
Sbjct: 173 MHCIFDQCKASVTVIKFGHMSSDLLAYGASDGTLTVCSVSEKPSVIKQLNGHSKDITDFD 232
Query: 61 FSSNNQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPV--------------- 105
F+SNNQYIAS+SLDKTVRVWEI KG C+RVIYGVSSQLCIRFHPV
Sbjct: 233 FTSNNQYIASASLDKTVRVWEIEKGNCMRVIYGVSSQLCIRFHPVKSMRVGNLPLIKPWE 292
Query: 106 ---------------NNNFLSVGNANKEINVFNFSTGRVINKSVFDSEVTSMDHDHTGHL 150
NNNFLSVGNANKEINVFNFSTGR INKSVFD+EVTSMDHDHTGHL
Sbjct: 293 SEKRLLNMSSPSYLVNNNFLSVGNANKEINVFNFSTGRTINKSVFDAEVTSMDHDHTGHL 352
Query: 151 IFCGDAQGCIYSVNMNSHTGGLXXXXXXXXXXXXXXPVTTVQYRSFSLLARGPVLLTCTQ 210
IFCGDAQGCIYSVNMNSHTG L PVTT+QYRSFSLLARGPVLLTCTQ
Sbjct: 353 IFCGDAQGCIYSVNMNSHTGILSRSHRHRSSSKHRSPVTTMQYRSFSLLARGPVLLTCTQ 412
Query: 211 DGNLSFFSVALEIKGYLTLRCSLKLTPRIHKIQASFCPLLSLEKGEFIVSGSEDSNVYFY 270
DGNLSFFSVALEIKGYLTLRCSLKLTPRIHKIQASFCPLLSLEKGEFIV+GSEDSNVYFY
Sbjct: 413 DGNLSFFSVALEIKGYLTLRCSLKLTPRIHKIQASFCPLLSLEKGEFIVAGSEDSNVYFY 472
Query: 271 DLTKPKHTCVNKLQG 285
DLTKPKHTCVNKLQG
Sbjct: 473 DLTKPKHTCVNKLQG 487
>Medtr1g072140.1 | transducin/WD40 repeat protein | HC |
chr1:32005480-32003360 | 20130731
Length = 316
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 137/277 (49%), Gaps = 26/277 (9%)
Query: 11 SVTVLKFGHMSSDLLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQYIAS 70
+V+ +KF + +LLA + D TL + S S S++ +L GHS+ + D +SS++ YI S
Sbjct: 29 AVSCVKFSN-DGNLLASASLDKTLIIYS-STTLSLLHRLTGHSEGINDIAWSSDSHYICS 86
Query: 71 SSLDKTVRVWEIYKGICIRVIYGVSSQL-CIRFHPVNNNFLSVGNANKEINVFNFSTGRV 129
+S DKT+R+W+ G C++ + G + C+ F+P +N++ G+ ++ + V+ TG+
Sbjct: 87 ASDDKTLRIWDANTGDCVKTLRGHGHNVFCVNFNP-QSNYIVSGSFDETVRVWEVKTGKS 145
Query: 130 INK-SVFDSEVTSMDHDHTGHLIFCGDAQGCIYSVNMNSHTGGLXXXXXXXXXXXXXXPV 188
++ VTS+D + G LI G G + NS G L V
Sbjct: 146 VHVIKAHAMPVTSVDFNRDGSLIVSGSHDGSCKIWDTNS--GAL-------LKTLIDDKV 196
Query: 189 TTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLTPRIHKIQASFCP 248
V + FS G +L T + L ++ A +L+ R++ + ++F
Sbjct: 197 PAVSFAKFS--PNGKFILVATLNDTLKLWNYA----AGRSLKMYSGHVNRVYCLTSTF-- 248
Query: 249 LLSLEKGEFIVSGSEDSNVYFYDLTKPKHTCVNKLQG 285
S+ G +IVSGSED +Y +DL + + KL+G
Sbjct: 249 --SVTNGRYIVSGSEDRCLYLWDLQQKN--MIQKLEG 281
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 142/292 (48%), Gaps = 43/292 (14%)
Query: 9 RASVTVLKFGHMSSDLLAYGASDGTLTVC----SVSDAPSV----IKQLNGHSKDVTDFD 60
+ +++ +KF + LLA ++D TL S SD+ S+ ++Q GH V+D
Sbjct: 27 KRAISAVKFSS-NGRLLASSSADKTLRTYGFTNSDSDSNSLTLSPMQQYEGHQHGVSDLA 85
Query: 61 FSSNNQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQL-CIRFHPVNNNFLSVGNANKEI 119
FSS+++Y+ S+S DKT+R+W++ G ++ ++G ++ + C+ F+P +N +S G+ ++ +
Sbjct: 86 FSSDSRYLVSASDDKTIRLWDVPTGSLVKTLHGHTNYVFCVNFNPQSNVIVS-GSFDETV 144
Query: 120 NVFNFSTGRVINKSVFDSE-VTSMDHDHTGHLIFCGDAQGC--IYSVNMNSHTGGLXXXX 176
V++ +G+ + S+ VT++D + G LI G I+ + L
Sbjct: 145 RVWDVKSGKCLKVLPAHSDPVTAVDFNRDGTLIVSSSYDGLCRIWDASTGHCIKTLIDDE 204
Query: 177 XXXXXXXXXXPVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLT 236
V Y FS A+ +L T D NL ++ Y T + T
Sbjct: 205 N-----------PPVSYVKFSPNAK--FILVGTLDNNLRLWN-------YSTGKFLKTYT 244
Query: 237 PRIHK---IQASFCPLLSLEKGEFIVSGSEDSNVYFYDLTKPKHTCVNKLQG 285
++ I +SF S+ G+++V GSED+ +Y + L K V KL+G
Sbjct: 245 GHVNSKYCISSSF----SITNGKYVVGGSEDNCIYLWGLQSRK--IVQKLEG 290
>Medtr8g092890.1 | transducin/WD-like repeat-protein | HC |
chr8:38951241-38954817 | 20130731
Length = 645
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 25 LAYGASDGTLTVCSV-----SDAP-------------SVIKQLNGHSKDVTDFDFSSNNQ 66
LA G DG + + V S P S +++L GHS D+ D +S N+
Sbjct: 245 LASGGEDGVVRIWRVFSRNKSHPPFVSLPNDIFQIEESPLQELFGHSSDILDLAWS-NSD 303
Query: 67 YIASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFST 126
+ SSS+DKTVR W+I C+ V CI+F+PVN N+ G+ + ++ ++
Sbjct: 304 ILLSSSMDKTVRAWKISCDQCLSVFPHKGFVTCIQFNPVNENYFISGSIDGKVRIWGIRE 363
Query: 127 GRVINKSVFDSEVTSMDHDHTGHLIFCGDAQG 158
RVI+ + ++++ + G G G
Sbjct: 364 ERVIDWADIRDVISAISYQQDGKGFVVGSLTG 395
>Medtr8g100005.1 | transducin/WD40 repeat protein | HC |
chr8:42372817-42368175 | 20130731
Length = 714
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 46 IKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPV 105
+ + GHS D+ D +S + ++ SSS+DKTVR+W++ C+RV + C+ F+PV
Sbjct: 365 LHEFQGHSDDILDLAWSKSG-FLLSSSVDKTVRLWQVGISKCLRVFSHNNYVTCVNFNPV 423
Query: 106 NNNFLSVGNANKEINVFNFSTGRVINKSVFDSEVTSMDHDHTGHLIFCGDAQGCI 160
N+NF G+ + ++ ++ RV++ VT+ + FC + QG I
Sbjct: 424 NDNFFISGSIDGKVRIWEVVRCRVVDYIDIREIVTA--------VCFCPNGQGTI 470
>Medtr8g100005.2 | transducin/WD40 repeat protein | HC |
chr8:42372817-42368175 | 20130731
Length = 714
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 46 IKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPV 105
+ + GHS D+ D +S + ++ SSS+DKTVR+W++ C+RV + C+ F+PV
Sbjct: 365 LHEFQGHSDDILDLAWSKSG-FLLSSSVDKTVRLWQVGISKCLRVFSHNNYVTCVNFNPV 423
Query: 106 NNNFLSVGNANKEINVFNFSTGRVINKSVFDSEVTSMDHDHTGHLIFCGDAQGCI 160
N+NF G+ + ++ ++ RV++ VT+ + FC + QG I
Sbjct: 424 NDNFFISGSIDGKVRIWEVVRCRVVDYIDIREIVTA--------VCFCPNGQGTI 470
>Medtr8g100005.3 | transducin/WD40 repeat protein | HC |
chr8:42372817-42370425 | 20130731
Length = 500
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 46 IKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPV 105
+ + GHS D+ D +S + ++ SSS+DKTVR+W++ C+RV + C+ F+PV
Sbjct: 365 LHEFQGHSDDILDLAWSKSG-FLLSSSVDKTVRLWQVGISKCLRVFSHNNYVTCVNFNPV 423
Query: 106 NNNFLSVGNANKEINVFNFSTGRVINKSVFDSEVTSMDHDHTGHLIFCGDAQGCI 160
N+NF G+ + ++ ++ RV++ VT+ + FC + QG I
Sbjct: 424 NDNFFISGSIDGKVRIWEVVRCRVVDYIDIREIVTA--------VCFCPNGQGTI 470
>Medtr3g491920.1 | transducin/WD40 repeat protein | HC |
chr3:41863790-41858899 | 20130731
Length = 702
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 20/231 (8%)
Query: 46 IKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPV 105
+ + GH +V D +S N Y+ SSS DKTVR+W++ + C+ V + CI+F+PV
Sbjct: 345 LHEFRGHRSEVLDLSWSKKN-YLLSSSTDKTVRLWQVNRDHCLEVFSHSNYVTCIQFNPV 403
Query: 106 NNNFLSVGNANKEINVFNFSTGRVINKSVFDSEVTSMDHDHTGHLIFCGDAQG--CIYSV 163
+ ++ G+ + ++ ++ +V++ + VT++ + G G +G Y +
Sbjct: 404 DEDYFISGSIDGKVRIWTIPDSQVVDWTDVRDIVTAVCYRPDGQGGIVGSLEGNCWFYKI 463
Query: 164 NMNSHTGGLXXXXXXXXXXXXXXPVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEI 223
+ N L P + F V++TC + I
Sbjct: 464 SDNQ----LQLDSQLCLIGKKKLPGRGITGFQFLPQDSNKVMVTCADS--------QVRI 511
Query: 224 KGYLTLRCSLKLTPRIHKIQASFCPLLSLEKGEFIVSGSEDSNVYFYDLTK 274
L + C K + ASF G+ I+S EDSNVY +++ +
Sbjct: 512 LDGLNVICKYKSLNTGSPMCASFT-----SDGKHILSACEDSNVYLWNVNQ 557
>Medtr4g123597.1 | transducin family protein/WD-40 repeat protein |
HC | chr4:51413416-51422755 | 20130731
Length = 944
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 9 RASVTVLKFGHMSSDLLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQYI 68
+ +VT L++ + S LLA G+ D + + V + + L GH VTD F + +
Sbjct: 106 KGAVTALRYNKLGS-LLASGSKDNDVILWDVVGETGLFR-LRGHRDQVTDVVFVGFGKKL 163
Query: 69 ASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGR 128
SSS DK +RVW+I C++++ G S++ FL G+A+KE+ ++
Sbjct: 164 VSSSKDKFLRVWDIDTQHCMQIVGGHHSEIWTLDVDPGERFLVTGSADKELRFYSIKQDS 223
Query: 129 VINKSVFD 136
V +SV D
Sbjct: 224 VDGESVKD 231
>Medtr1g007740.1 | transducin/WD40 repeat protein | HC |
chr1:529208-533085 | 20130731
Length = 784
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 46 IKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPV 105
+ + +GH ++ D +S NN Y+ SSS+DKTVR+W++ C++V + CI+F+PV
Sbjct: 356 LHEFHGHGGEILDLSWSKNN-YLLSSSVDKTVRLWQVGHDCCLKVFSHSNYVTCIQFNPV 414
Query: 106 NNNFLSVGNANKEINVFNFSTGRVINKSVFDSEVTSMDHDHTGHLIFCGDAQG 158
++++ G+ + ++ ++ V++ + VT++ + G + G G
Sbjct: 415 DDDYFISGSIDGKVRIWGIPDCHVVDWTDVKEIVTAVCYRPDGQVGIIGSMTG 467
>Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr6:91770-77124 | 20130731
Length = 760
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 24 LLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIY 83
L+A GA+ GT+ + + +A +++ L GH + T DF ++ AS SLD +++W+I
Sbjct: 73 LVAAGAASGTIKLWDLEEA-KIVRTLTGHRSNCTSVDFHPFGEFFASGSLDTNLKIWDIR 131
Query: 84 KGICIRVIYGVSSQL-CIRFHPVNNNFLSVGNANKEINVFNFSTGRVIN 131
K CI G + + IRF P + ++ G + + +++ + G++++
Sbjct: 132 KKGCIHTYKGHTRGVNAIRFTP-DGRWVVSGGEDNTVKLWDLTAGKLLH 179
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 10 ASVTVLKFGHMSSDLLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQYIA 69
++V LK G SS +L G D + + ++ P+ I L+GHS + +F S+ +A
Sbjct: 17 SAVNCLKIGRKSSRVLVTGGEDHKVNLWAIG-KPNAILSLSGHSSGIDSVNFDSSEVLVA 75
Query: 70 SSSLDKTVRVWEIYKGICIRVIYGVSSQ-LCIRFHPVNNNFLSVGNANKEINVFNF 124
+ + T+++W++ + +R + G S + FHP F + G+ + + +++
Sbjct: 76 AGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDFHPF-GEFFASGSLDTNLKIWDI 130
>Medtr3g106080.1 | TBP-associated factor 5 | HC |
chr3:48932864-48942802 | 20130731
Length = 669
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 51 GHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIYKGICIRVIYG-VSSQLCIRFHPVNNNF 109
GH+ V D FS Y ASSS D+T RVW + + +R++ G +S C+++H N N+
Sbjct: 459 GHNYPVWDVQFSPMGHYFASSSHDRTARVWSMDRIQPLRIMAGHLSDVDCVQWH-ANCNY 517
Query: 110 LSVGNANKEINVFNFSTGRVINKSV-FDSEVTSMDHDHTGHLIFCGDAQGCIYSVNMNS 167
++ G+++K + +++ +G + V + S+ G + GD G I +++S
Sbjct: 518 IATGSSDKTVRLWDVQSGECVRVFVGHRGMILSLSMSPDGRYMASGDEDGTIMMWDLSS 576
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 25 LAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIYK 84
A + D T V S+ D ++ + GH DV + +N YIA+ S DKTVR+W++
Sbjct: 476 FASSSHDRTARVWSM-DRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQS 534
Query: 85 GICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRVINKSVFDSE-VTSMD 143
G C+RV G + + +++ G+ + I +++ S+GR + V + V S+
Sbjct: 535 GECVRVFVGHRGMILSLSMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLVGHTSCVWSLA 594
Query: 144 HDHTGHLIFCGDAQGCIYSVNMNSHT 169
G ++ G A + ++N+ T
Sbjct: 595 FSSEGSILASGSADCTVKLWDVNTST 620
>Medtr2g079740.1 | transducin/WD-like repeat-protein | HC |
chr2:33593874-33587864 | 20130731
Length = 858
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 22/226 (9%)
Query: 49 LNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPVNNN 108
GH DV D +S +Q++ SSS+DKTVR+W + C+++ CI F+PV++
Sbjct: 485 FKGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIHFNPVDDR 543
Query: 109 FLSVGNANKEINVFNFSTGRVINKSVFDSEVTSMDHDHTGHLIFCGDAQGC--IYSVNMN 166
+ G+ + ++ +++ +V++ VT+ + G G +G +Y+ + N
Sbjct: 544 YFISGSLDAKVRIWSIPDRQVVDWIDLHEMVTAACYTPDGQGALVGSYKGSCHLYNTSEN 603
Query: 167 SHTGGLXXXXXXXXXXXXXXPVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVAL--EIK 224
+T Q F+ + VL+T S+ L + K
Sbjct: 604 KLQQKSQINLQNKKKKSNHKKITGFQ---FAPGSSSEVLITSADSRIRVVDSIDLVHKFK 660
Query: 225 GYLTLRCSLKLTPRIHKIQASFCPLLSLEKGEFIVSGSEDSNVYFY 270
G+ +I AS G++IV+ SEDS+VY +
Sbjct: 661 GFRNASS---------QISASLTA-----NGKYIVAASEDSHVYIW 692
>Medtr4g113080.1 | LisH-SSDP-WD40 | LC | chr4:46463876-46455979 |
20130731
Length = 781
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 29 ASDGTLTVCSVSDAPSVI---------KQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRV 79
+SDG L V D + + L H++ +TD FS + Y+A+SS DKTV+V
Sbjct: 513 SSDGKLFVTGGRDKKASLWCTKLFNLKSTLEEHTQRITDVRFSPSMFYVATSSADKTVKV 572
Query: 80 WEIYK-GICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRVINKSVFDSE 138
W++ G +R G ++ L + FHP + + + NKEI +N + G I +F
Sbjct: 573 WDVNNLGHSLRTFTGNTAVLSLDFHPSKHGLICSCD-NKEIRFWNIANGSCI--GIFKGG 629
Query: 139 VTSM 142
VT +
Sbjct: 630 VTQV 633
>Medtr3g107910.1 | transcriptional corepressor leunig-like protein |
HC | chr3:49795618-49803676 | 20130731
Length = 897
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 9 RASVTVLKFGHMSSD--LLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQ 66
RAS + + H SSD LLA G D V +D+ L HS +TD FS++
Sbjct: 618 RASSSKIACCHFSSDGKLLASGGHDKK-AVIWYADSLKQKAILEEHSALITDVRFSASMP 676
Query: 67 YIASSSLDKTVRVWEI-YKGICIRVIYGVS-SQLCIRFHPVNNNFLSVGNANKEINVFNF 124
+A+SS DKTVRVW++ G +R G S S + + FHP ++ + + + EI ++
Sbjct: 677 RLATSSFDKTVRVWDVDNPGYSLRTFTGHSTSVMSLDFHPNKDDLICSCDGDGEIRYWSI 736
Query: 125 STGRVI 130
+ G +
Sbjct: 737 NNGSCV 742
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 3 CIFDQCRASVTVLKFGHMSSDLLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFS 62
I ++ A +T ++F S LA + D T+ V V + ++ GHS V DF
Sbjct: 657 AILEEHSALITDVRFS-ASMPRLATSSFDKTVRVWDVDNPGYSLRTFTGHSTSVMSLDFH 715
Query: 63 SN-NQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNAN 116
N + I S D +R W I G C+RV G ++Q+ RF P +L+ N
Sbjct: 716 PNKDDLICSCDGDGEIRYWSINNGSCVRVSKGGTTQM--RFQPRLGRYLAAAAEN 768
>Medtr3g107910.2 | transcriptional corepressor leunig-like protein |
HC | chr3:49795618-49803676 | 20130731
Length = 904
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 9 RASVTVLKFGHMSSD--LLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQ 66
RAS + + H SSD LLA G D V +D+ L HS +TD FS++
Sbjct: 625 RASSSKIACCHFSSDGKLLASGGHDKK-AVIWYADSLKQKAILEEHSALITDVRFSASMP 683
Query: 67 YIASSSLDKTVRVWEI-YKGICIRVIYGVS-SQLCIRFHPVNNNFLSVGNANKEINVFNF 124
+A+SS DKTVRVW++ G +R G S S + + FHP ++ + + + EI ++
Sbjct: 684 RLATSSFDKTVRVWDVDNPGYSLRTFTGHSTSVMSLDFHPNKDDLICSCDGDGEIRYWSI 743
Query: 125 STG 127
+ G
Sbjct: 744 NNG 746
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 3 CIFDQCRASVTVLKFGHMSSDLLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFS 62
I ++ A +T ++F S LA + D T+ V V + ++ GHS V DF
Sbjct: 664 AILEEHSALITDVRFS-ASMPRLATSSFDKTVRVWDVDNPGYSLRTFTGHSTSVMSLDFH 722
Query: 63 SN-NQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNAN 116
N + I S D +R W I G C+RV G ++Q+ RF P +L+ N
Sbjct: 723 PNKDDLICSCDGDGEIRYWSINNGSCVRVSKGGTTQM--RFQPRLGRYLAAAAEN 775
>Medtr1g011610.1 | transcriptional corepressor leunig-like protein |
HC | chr1:2110686-2100048 | 20130731
Length = 893
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 5 FDQCRASVTVLKFGHMSSD--LLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFS 62
+ RAS + H SSD LLA G D + V +D+ L HS +TD FS
Sbjct: 606 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKV-VLWYTDSLKQKATLEEHSLLITDVRFS 664
Query: 63 SNNQYIASSSLDKTVRVWEI-YKGICIRVIYGVSSQ-LCIRFHPVNNNFLSVGNANKEIN 120
+ +A+SS DKTVRVW++ G +R G S+ + + FHP ++ + + + EI
Sbjct: 665 PSMPRLATSSYDKTVRVWDVDNPGYSLRTFTGHSAAVMSLDFHPNKDDLICSCDCDGEIR 724
Query: 121 VFNFSTG 127
++ + G
Sbjct: 725 YWSINNG 731
>Medtr1g011610.2 | transcriptional corepressor leunig-like protein |
HC | chr1:2110664-2100048 | 20130731
Length = 902
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 5 FDQCRASVTVLKFGHMSSD--LLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFS 62
+ RAS + H SSD LLA G D + V +D+ L HS +TD FS
Sbjct: 615 LNSVRASTNKVVCSHFSSDGKLLASGGHDKKV-VLWYTDSLKQKATLEEHSLLITDVRFS 673
Query: 63 SNNQYIASSSLDKTVRVWEI-YKGICIRVIYGVSSQ-LCIRFHPVNNNFLSVGNANKEIN 120
+ +A+SS DKTVRVW++ G +R G S+ + + FHP ++ + + + EI
Sbjct: 674 PSMPRLATSSYDKTVRVWDVDNPGYSLRTFTGHSAAVMSLDFHPNKDDLICSCDCDGEIR 733
Query: 121 VFNFSTG 127
++ + G
Sbjct: 734 YWSINNG 740
>Medtr2g086140.1 | histone transcription regulator HIRA protein | HC
| chr2:36226276-36219828 | 20130731
Length = 992
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 45 VIKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQL-CIRFH 103
V+ L GHS DV D ++S ++ +AS SLD T+ +W + GIC V+ G SS + + +
Sbjct: 117 VVMTLRGHSADVVDLNWSPDDSSLASGSLDNTIHIWNMTNGICTAVLRGHSSLVKGVAWD 176
Query: 104 PVNNNFLSVGNANKEINVFNFS 125
P+ +F++ + +K + ++ S
Sbjct: 177 PI-GSFIASQSDDKTVIIWRTS 197
>Medtr7g060420.1 | transducin/WD-like repeat-protein | HC |
chr7:21831049-21825202 | 20130731
Length = 1049
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 20/201 (9%)
Query: 73 LDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRVINK 132
+DKTVR+W++ C++ C++F+P++ ++ G+ + ++ ++N S V++
Sbjct: 545 MDKTVRLWDLETKTCLKFFAHNDYVTCVQFNPMDEDYFISGSLDAKVRMWNISARLVVDW 604
Query: 133 SVFDSEVTSMDHDHTGHLIFCGDAQGCIYSVNMNSHTGGLXXXXXXXXXXXXXXPVTTVQ 192
+ VT++ + G + G +G + + + L + V
Sbjct: 605 TDIHEMVTAVSYTPDGQGVLVGTQKGNCRTYGIEDYK--LTQTSTIELRNKKKSQLKKVT 662
Query: 193 YRSFSLLARGPVLLTCTQDGNLSFF---SVALEIKGYLTLRCSLKLTPRIHKIQASFCPL 249
F+ VL+T + D + + + KG+ ++ ASF P
Sbjct: 663 GFQFAPCNPAEVLVT-SADSRIRIVDGTEIVHKFKGFRNANS---------QMAASFSP- 711
Query: 250 LSLEKGEFIVSGSEDSNVYFY 270
G FI+S SEDS VY +
Sbjct: 712 ----NGRFIISASEDSQVYVW 728
>Medtr2g012630.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr2:3190941-3179834 | 20130731
Length = 1111
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 24 LLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIY 83
L+ G++ G + + + ++ +++ + GH + T +F ++ AS S+D +++W+
Sbjct: 72 LVLAGSTSGVIRLWDLEES-KMVRTVAGHRSNCTSVEFHPFGEFFASGSMDTNLKIWDNR 130
Query: 84 KGICIRVIYGVSSQL-CIRFHPVNNNFLSVGNANKEINVFNFSTGRVINKSVF-DSEVTS 141
K CI G S + I+F P + ++ G + + V++ + G++++ F D +TS
Sbjct: 131 KKGCIHTYKGHSQGISTIKFTP-DGRWVVSGGFDNVVKVWDLTAGKLLHDFNFHDGHITS 189
Query: 142 MDHDHTGHLIFCGDA 156
+D L+ G A
Sbjct: 190 LDFHPLEFLLATGSA 204
>Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr2:3190921-3179833 | 20130731
Length = 1030
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 24 LLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIY 83
L+ G++ G + + + ++ +++ + GH + T +F ++ AS S+D +++W+
Sbjct: 72 LVLAGSTSGVIRLWDLEES-KMVRTVAGHRSNCTSVEFHPFGEFFASGSMDTNLKIWDNR 130
Query: 84 KGICIRVIYGVSSQL-CIRFHPVNNNFLSVGNANKEINVFNFSTGRVINKSVF-DSEVTS 141
K CI G S + I+F P + ++ G + + V++ + G++++ F D +TS
Sbjct: 131 KKGCIHTYKGHSQGISTIKFTP-DGRWVVSGGFDNVVKVWDLTAGKLLHDFNFHDGHITS 189
Query: 142 MDHDHTGHLIFCGDA 156
+D L+ G A
Sbjct: 190 LDFHPLEFLLATGSA 204
>Medtr4g053675.1 | histone transcription regulator HIRA protein | HC
| chr4:19445007-19455001 | 20130731
Length = 1031
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 45 VIKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIYKGICIRVIYGVSSQL-CIRFH 103
V L GH+ DV D ++S ++ +AS SLD T+ +W + GIC V+ G SS + + +
Sbjct: 121 VAMTLRGHTADVVDLNWSPDDSTLASGSLDNTIHIWNMSNGICTTVLRGHSSLVKGVAWD 180
Query: 104 PVNNNFLSVGNANKEINVFNFS 125
P+ +F++ + +K + ++ S
Sbjct: 181 PI-GSFIASQSDDKTVIIWKTS 201
>Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623829 | 20130731
Length = 576
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 24 LLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIY 83
LLA + D T+ + + + +I LNGH V FS N +YIAS SLDK++ +W +
Sbjct: 476 LLASASFDSTVKLWDI-ELGKLIHSLNGHRHPVYSVAFSPNGEYIASGSLDKSLHIWSLK 534
Query: 84 KGICIRVIYG 93
+G IR G
Sbjct: 535 EGKIIRTYNG 544
>Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623874 | 20130731
Length = 578
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 24 LLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIY 83
LLA + D T+ + + + +I LNGH V FS N +YIAS SLDK++ +W +
Sbjct: 478 LLASASFDSTVKLWDI-ELGKLIHSLNGHRHPVYSVAFSPNGEYIASGSLDKSLHIWSLK 536
Query: 84 KGICIRVIYG 93
+G IR G
Sbjct: 537 EGKIIRTYNG 546
>Medtr5g085250.1 | E3 ubiquitin-protein ligase COP1 | HC |
chr5:36796022-36807260 | 20130731
Length = 677
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 9 RASVTVLKFGHMSSDLLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQYI 68
+A++ +K+ S + +A G++D + + + + +GH K V+ F SN++ +
Sbjct: 507 KANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVHVFSGHKKAVSYVKFLSNDE-L 565
Query: 69 ASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGR 128
AS+S D T+R+W++ + + +R G +++ V++ +++ G+ E+ V++ +
Sbjct: 566 ASASTDSTLRLWDVKQNVPVRTFRGHANEKNFVGLTVSSEYIACGSETNEVFVYHKEISK 625
Query: 129 VINKSVFDSEVTSMDHDHTG 148
+ F S D G
Sbjct: 626 PLTWHRFSSPDMDDAEDEAG 645
>Medtr5g085250.2 | E3 ubiquitin-protein ligase COP1 | HC |
chr5:36796040-36807238 | 20130731
Length = 573
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 9 RASVTVLKFGHMSSDLLAYGASDGTLTVCSVSDAPSVIKQLNGHSKDVTDFDFSSNNQYI 68
+A++ +K+ S + +A G++D + + + + +GH K V+ F SN++ +
Sbjct: 403 KANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVHVFSGHKKAVSYVKFLSNDE-L 461
Query: 69 ASSSLDKTVRVWEIYKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGR 128
AS+S D T+R+W++ + + +R G +++ V++ +++ G+ E+ V++ +
Sbjct: 462 ASASTDSTLRLWDVKQNVPVRTFRGHANEKNFVGLTVSSEYIACGSETNEVFVYHKEISK 521
Query: 129 VINKSVFDSEVTSMDHDHTG 148
+ F S D G
Sbjct: 522 PLTWHRFSSPDMDDAEDEAG 541