Miyakogusa Predicted Gene

Lj0g3v0299889.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0299889.1 tr|G7ID28|G7ID28_MEDTR Multidrug resistance
protein ABC transporter family OS=Medicago truncatula
GN,79.55,0.000000000001, ,CUFF.20242.1
         (63 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g099280.2 | ABC transporter-like family-protein | HC | chr...    77   4e-15
Medtr1g099280.3 | ABC transporter-like family-protein | HC | chr...    77   4e-15
Medtr1g099280.1 | ABC transporter-like family-protein | HC | chr...    77   4e-15
Medtr8g042520.1 | ABC transporter C family protein | HC | chr8:1...    70   5e-13
Medtr6g034310.2 | ABC transporter-like family-protein | HC | chr...    69   1e-12
Medtr6g034230.1 | ABC transporter family protein | HC | chr6:116...    68   2e-12
Medtr6g034310.1 | ABC transporter-like family-protein | HC | chr...    67   3e-12
Medtr6g034310.5 | ABC transporter-like family-protein | HC | chr...    67   3e-12
Medtr6g034310.4 | ABC transporter-like family-protein | HC | chr...    67   3e-12
Medtr6g034335.1 | ABC transporter family protein | HC | chr6:117...    64   3e-11
Medtr0196s0020.1 | multidrug resistance-associated protein ABC d...    64   3e-11
Medtr6g034220.1 | ABC transporter-like family-protein | HC | chr...    64   4e-11
Medtr6g034265.1 | ABC transporter family protein | HC | chr6:116...    60   5e-10
Medtr6g034755.1 | ABC transporter family protein | HC | chr6:120...    60   5e-10
Medtr6g034270.1 | ABC transporter family protein | HC | chr6:116...    60   6e-10
Medtr6g034350.1 | ABC transporter family protein | HC | chr6:117...    59   1e-09
Medtr0019s0020.1 | ABC transporter family protein | HC | scaffol...    51   2e-07

>Medtr1g099280.2 | ABC transporter-like family-protein | HC |
            chr1:44809048-44815945 | 20130731
          Length = 1476

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/44 (79%), Positives = 37/44 (84%)

Query: 20   KCLIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            K L +  GKLVEYDEPMNLMK+E  L GKLVKEYWSHFQSAESH
Sbjct: 1433 KVLSISDGKLVEYDEPMNLMKKEGSLFGKLVKEYWSHFQSAESH 1476


>Medtr1g099280.3 | ABC transporter-like family-protein | HC |
            chr1:44808963-44816396 | 20130731
          Length = 1476

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/44 (79%), Positives = 37/44 (84%)

Query: 20   KCLIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            K L +  GKLVEYDEPMNLMK+E  L GKLVKEYWSHFQSAESH
Sbjct: 1433 KVLSISDGKLVEYDEPMNLMKKEGSLFGKLVKEYWSHFQSAESH 1476


>Medtr1g099280.1 | ABC transporter-like family-protein | HC |
            chr1:44809048-44816157 | 20130731
          Length = 1501

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/44 (79%), Positives = 37/44 (84%)

Query: 20   KCLIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            K L +  GKLVEYDEPMNLMK+E  L GKLVKEYWSHFQSAESH
Sbjct: 1458 KVLSISDGKLVEYDEPMNLMKKEGSLFGKLVKEYWSHFQSAESH 1501


>Medtr8g042520.1 | ABC transporter C family protein | HC |
           chr8:16392569-16389177 | 20130731
          Length = 669

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/46 (73%), Positives = 36/46 (78%), Gaps = 3/46 (6%)

Query: 21  CLIVFS---GKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
           C +V S   GKLVEYDEP NLMKRE  L  KLVKEYWS+FQSAESH
Sbjct: 624 CTMVLSINDGKLVEYDEPTNLMKREESLFRKLVKEYWSYFQSAESH 669


>Medtr6g034310.2 | ABC transporter-like family-protein | HC |
            chr6:11712647-11705613 | 20130731
          Length = 1100

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/46 (71%), Positives = 34/46 (73%), Gaps = 3/46 (6%)

Query: 21   CLIVFS---GKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            C +V S   GKL EYDEP NLMKRE  L  KLVKEYWSHFQS ESH
Sbjct: 1055 CTMVLSISDGKLAEYDEPTNLMKREESLFRKLVKEYWSHFQSPESH 1100


>Medtr6g034230.1 | ABC transporter family protein | HC |
            chr6:11634598-11627579 | 20130731
          Length = 1475

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/42 (76%), Positives = 33/42 (78%)

Query: 22   LIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            L +  GKL EYDEP NLMKRE  L  KLVKEYWSHFQSAESH
Sbjct: 1434 LAISDGKLAEYDEPKNLMKREESLFRKLVKEYWSHFQSAESH 1475


>Medtr6g034310.1 | ABC transporter-like family-protein | HC |
            chr6:11712647-11705613 | 20130731
          Length = 1458

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/46 (71%), Positives = 34/46 (73%), Gaps = 3/46 (6%)

Query: 21   CLIVFS---GKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            C +V S   GKL EYDEP NLMKRE  L  KLVKEYWSHFQS ESH
Sbjct: 1413 CTMVLSISDGKLAEYDEPTNLMKREESLFRKLVKEYWSHFQSPESH 1458


>Medtr6g034310.5 | ABC transporter-like family-protein | HC |
            chr6:11712651-11705613 | 20130731
          Length = 1458

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/46 (71%), Positives = 34/46 (73%), Gaps = 3/46 (6%)

Query: 21   CLIVFS---GKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            C +V S   GKL EYDEP NLMKRE  L  KLVKEYWSHFQS ESH
Sbjct: 1413 CTMVLSISDGKLAEYDEPTNLMKREESLFRKLVKEYWSHFQSPESH 1458


>Medtr6g034310.4 | ABC transporter-like family-protein | HC |
            chr6:11712647-11705613 | 20130731
          Length = 1458

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/46 (71%), Positives = 34/46 (73%), Gaps = 3/46 (6%)

Query: 21   CLIVFS---GKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            C +V S   GKL EYDEP NLMKRE  L  KLVKEYWSHFQS ESH
Sbjct: 1413 CTMVLSISDGKLAEYDEPTNLMKREESLFRKLVKEYWSHFQSPESH 1458


>Medtr6g034335.1 | ABC transporter family protein | HC |
            chr6:11741394-11734594 | 20130731
          Length = 1479

 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/42 (71%), Positives = 34/42 (80%)

Query: 22   LIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            L++  GKL EYDEPM LMKRE  L G LVKEYWS+F+SAESH
Sbjct: 1438 LVISDGKLGEYDEPMKLMKRERSLFGNLVKEYWSYFKSAESH 1479


>Medtr0196s0020.1 | multidrug resistance-associated protein ABC domain
            protein | HC | scaffold0196:10698-17326 | 20130731
          Length = 1475

 Score = 63.9 bits (154), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/42 (71%), Positives = 32/42 (76%)

Query: 22   LIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            L +  G+L EYDEP NLMKRE  L  KLV EYWSHFQSAESH
Sbjct: 1434 LAISDGELAEYDEPTNLMKREESLFRKLVIEYWSHFQSAESH 1475


>Medtr6g034220.1 | ABC transporter-like family-protein | HC |
            chr6:11615730-11622859 | 20130731
          Length = 1474

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/42 (66%), Positives = 32/42 (76%)

Query: 22   LIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            L +  GKL EYDEP +LMKRE  +  +LVKEYWSHFQS ESH
Sbjct: 1433 LAISDGKLAEYDEPTSLMKRENSMFRQLVKEYWSHFQSTESH 1474


>Medtr6g034265.1 | ABC transporter family protein | HC |
            chr6:11661535-11667511 | 20130731
          Length = 1473

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/42 (66%), Positives = 30/42 (71%)

Query: 22   LIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            L +  GKL EYDEPMNLMKRE  +  KLVKEYWSH QS   H
Sbjct: 1432 LSISDGKLAEYDEPMNLMKREESMFRKLVKEYWSHSQSGNLH 1473


>Medtr6g034755.1 | ABC transporter family protein | HC |
            chr6:12095603-12089186 | 20130731
          Length = 1477

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/37 (70%), Positives = 29/37 (78%)

Query: 22   LIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQ 58
            L +  GKL EYDEPM LMK+E  L G+LVKEYWSHFQ
Sbjct: 1441 LSISDGKLAEYDEPMKLMKKETSLFGQLVKEYWSHFQ 1477


>Medtr6g034270.1 | ABC transporter family protein | HC |
            chr6:11674991-11669616 | 20130731
          Length = 1292

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/42 (69%), Positives = 32/42 (76%)

Query: 22   LIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            L +  GKL EYDEP NLMKRE  L  KLVKEYWS+ QSAES+
Sbjct: 1251 LAISDGKLAEYDEPTNLMKREESLFRKLVKEYWSNSQSAESN 1292


>Medtr6g034350.1 | ABC transporter family protein | HC |
            chr6:11754332-11760182 | 20130731
          Length = 1477

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/37 (70%), Positives = 29/37 (78%)

Query: 22   LIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQ 58
            L +  GKL EYDEPM LMK+E  L G+LVKEYWSHFQ
Sbjct: 1441 LSISDGKLAEYDEPMKLMKKEKSLFGQLVKEYWSHFQ 1477


>Medtr0019s0020.1 | ABC transporter family protein | HC |
            scaffold0019:10318-4362 | 20130731
          Length = 1425

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/41 (63%), Positives = 29/41 (70%)

Query: 22   LIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAES 62
            L +  GKL EYDEP NLMKRE  L  KLVKEY S+ QS +S
Sbjct: 1384 LSISDGKLAEYDEPTNLMKREESLFRKLVKEYRSYVQSTKS 1424