Miyakogusa Predicted Gene

Lj0g3v0299659.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0299659.2 tr|Q2PQS5|Q2PQS5_9BRAS SPIKE-like protein 1
(Fragment) OS=Capsella rubella GN=SPIKE1 PE=2
SV=1,86.11,0.00000000009,SPIKE-1,NULL; DEDICATOR OF CYTOKINESIS
(DOCK),Dedicator of cytokinesis,CUFF.20160.2
         (70 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g056900.1 | guanine nucleotide exchange factor, putative |...   145   1e-35

>Medtr8g056900.1 | guanine nucleotide exchange factor, putative | HC
           | chr8:18891306-18913933 | 20130731
          Length = 1836

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 68/70 (97%), Positives = 69/70 (98%)

Query: 1   MPGRDPSDRNYLSSVLIQELFVTWDHEDLSLRAKAARILVVLLCKHEFDVRYQKPEDKLY 60
           MPGRDPSDRNYLSSVLIQELFVTWDHEDLSLRAKAARILVVLLCKHEFDVRYQKPEDKLY
Sbjct: 901 MPGRDPSDRNYLSSVLIQELFVTWDHEDLSLRAKAARILVVLLCKHEFDVRYQKPEDKLY 960

Query: 61  IAQLYFPLIG 70
           IAQLY P+IG
Sbjct: 961 IAQLYLPVIG 970