Miyakogusa Predicted Gene

Lj0g3v0298499.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0298499.1 Non Characterized Hit- tr|D8RUV9|D8RUV9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,53.65,4e-17,Pollen_Ole_e_I,Pollen Ole e 1 allergen/extensin;
seg,NULL,CUFF.20066.1
         (484 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g033130.1 | pollen protein Ole E I-like protein | LC | chr...   190   3e-48
Medtr1g033080.1 | pollen Ole e I family allergens | HC | chr1:11...   189   4e-48
Medtr1g116947.1 | pollen protein Ole E I-like protein | LC | chr...   187   2e-47
Medtr1g033100.1 | pollen protein Ole E I-like protein | LC | chr...   130   4e-30

>Medtr1g033130.1 | pollen protein Ole E I-like protein | LC |
           chr1:11901677-11906311 | 20130731
          Length = 1163

 Score =  190 bits (483), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 94/127 (74%), Positives = 101/127 (79%)

Query: 293 LIVKVVGKVYSYRCYDWEYPEKSHNKKHLKGAIVEVKCKAGKNIIKAYGKTKSNGKYSIT 352
           LIV+VVGKVYS+RCYDW YP KSHNKKHLKGA+VEV CKAG  I+KAYGKTK+NGKY+IT
Sbjct: 432 LIVRVVGKVYSFRCYDWNYPAKSHNKKHLKGAVVEVTCKAGSKIVKAYGKTKNNGKYAIT 491

Query: 353 VKDFDYVKYGPTVCKAVLYAPPKHSPFDXXXXXXXXXXXXXXXXXXYEVVLKAKPFAYAS 412
           VKDFDYVKYG TVCKA LYAPPK SPF+                  YEVVLKAKPFAYAS
Sbjct: 492 VKDFDYVKYGSTVCKATLYAPPKGSPFNIPTKLNQGTKLYLKSKDKYEVVLKAKPFAYAS 551

Query: 413 KKHFKEC 419
           KKHFKEC
Sbjct: 552 KKHFKEC 558


>Medtr1g033080.1 | pollen Ole e I family allergens | HC |
           chr1:11878922-11883894 | 20130731
          Length = 1097

 Score =  189 bits (481), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/127 (74%), Positives = 101/127 (79%)

Query: 293 LIVKVVGKVYSYRCYDWEYPEKSHNKKHLKGAIVEVKCKAGKNIIKAYGKTKSNGKYSIT 352
           LIV+VVGKVYS+RCYDW YP KSHNKKHLKGA+VEV CKAG  I+KAYGKTK+NGKY+IT
Sbjct: 465 LIVRVVGKVYSFRCYDWNYPAKSHNKKHLKGAVVEVTCKAGSKIVKAYGKTKNNGKYAIT 524

Query: 353 VKDFDYVKYGPTVCKAVLYAPPKHSPFDXXXXXXXXXXXXXXXXXXYEVVLKAKPFAYAS 412
           VKDFDYVKYG TVCKA LYAPPK SPF+                  YEVVLKAKPFAYAS
Sbjct: 525 VKDFDYVKYGSTVCKAALYAPPKGSPFNIPTKLNQGTKLYLKSKDKYEVVLKAKPFAYAS 584

Query: 413 KKHFKEC 419
           KKHFKEC
Sbjct: 585 KKHFKEC 591



 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 28/37 (75%)

Query: 1  MTGRARNPVRGRLWPQMTMALAIVFISTTVVSAAADG 37
          MT +A +P RG  WP M MALAIV IST+VVSAAAD 
Sbjct: 1  MTVKASSPKRGHNWPPMAMALAIVLISTSVVSAAADS 37


>Medtr1g116947.1 | pollen protein Ole E I-like protein | LC |
           chr1:52822361-52817506 | 20130731
          Length = 1074

 Score =  187 bits (476), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/127 (72%), Positives = 104/127 (81%)

Query: 293 LIVKVVGKVYSYRCYDWEYPEKSHNKKHLKGAIVEVKCKAGKNIIKAYGKTKSNGKYSIT 352
           LIVKVVGKVYSY+CY+WEYPEKSH+KKHLKGA+VEVKCKAG+NIIKAYGKTKSNGKY+IT
Sbjct: 423 LIVKVVGKVYSYKCYNWEYPEKSHDKKHLKGAVVEVKCKAGRNIIKAYGKTKSNGKYAIT 482

Query: 353 VKDFDYVKYGPTVCKAVLYAPPKHSPFDXXXXXXXXXXXXXXXXXXYEVVLKAKPFAYAS 412
           + +F+YVKYG  VCKA LYAPPK SPF+                  YEVVLKAKPFAYAS
Sbjct: 483 IPNFNYVKYGSVVCKAKLYAPPKDSPFNIPTKLNEGTDLKVKSKDKYEVVLKAKPFAYAS 542

Query: 413 KKHFKEC 419
           KKH++EC
Sbjct: 543 KKHYEEC 549



 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 28/37 (75%)

Query: 1  MTGRARNPVRGRLWPQMTMALAIVFISTTVVSAAADG 37
          MT R  +P+RGR  P M MALAIV ISTTVVS AADG
Sbjct: 1  MTARGSDPIRGRFRPHMAMALAIVLISTTVVSVAADG 37


>Medtr1g033100.1 | pollen protein Ole E I-like protein | LC |
           chr1:11890072-11892621 | 20130731
          Length = 546

 Score =  130 bits (326), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/97 (70%), Positives = 71/97 (73%)

Query: 323 GAIVEVKCKAGKNIIKAYGKTKSNGKYSITVKDFDYVKYGPTVCKAVLYAPPKHSPFDXX 382
            A+VEV CKAG  IIKAYGKTK NGKY+ITVKDFDYVKYG TVCKA LYAPPK SPF+  
Sbjct: 4   SAVVEVTCKAGSKIIKAYGKTKINGKYAITVKDFDYVKYGSTVCKAALYAPPKGSPFNIP 63

Query: 383 XXXXXXXXXXXXXXXXYEVVLKAKPFAYASKKHFKEC 419
                           YEVVLKAKPFAYASKKHFKEC
Sbjct: 64  TKLNQGTNLYLKSKDKYEVVLKAKPFAYASKKHFKEC 100