Miyakogusa Predicted Gene

Lj0g3v0298129.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0298129.1 Non Characterized Hit- tr|D8SZ21|D8SZ21_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,36.42,1e-17,seg,NULL; Rhodanese,Rhodanese-like domain;
RHODANESE_3,Rhodanese-like domain; FAMILY NOT NAMED,NULL;,CUFF.20042.1
         (287 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g075540.1 | rhodanese/cell cycle control phosphatase super...   453   e-128
Medtr4g015860.1 | rhodanese/cell cycle control phosphatase super...   117   2e-26
Medtr7g092820.1 | rhodanese/cell cycle control phosphatase super...    74   1e-13
Medtr3g092040.1 | rhodanese/cell cycle control phosphatase super...    52   9e-07

>Medtr3g075540.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr3:34400445-34404582 |
           20130731
          Length = 290

 Score =  453 bits (1166), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 224/290 (77%), Positives = 243/290 (83%), Gaps = 3/290 (1%)

Query: 1   METLSFPINTLINSKAN-YISLTASTNYAXXXXXXXXXXXXXXXXCWK-GVVRVQAESE- 57
           ME LS P  ++ NS +N YISL+A+TNYA                  K  VV V+AE+E 
Sbjct: 1   MEALSLPTISVTNSNSNTYISLSAATNYASLSSLQHRPSSSTKHFTMKKSVVLVKAENEE 60

Query: 58  DFELKQMRDMAAARKRWEALIRDGKVKVLTPREAGYAVQLSNKPLLDVRPSNEHYKAWVR 117
           DFELKQ+RDMAAARKRWEAL+RD K+KVLTPREAGYAVQLSNKPLLDVRPSNEH KAWV+
Sbjct: 61  DFELKQVRDMAAARKRWEALLRDEKIKVLTPREAGYAVQLSNKPLLDVRPSNEHNKAWVK 120

Query: 118 GSTWIPIFDVDHTLDAGTIPRKITNFVMGGWWSGMPTLSYESQFLAKVEEKFPKDTELIV 177
           GSTWIPIF+VD  LD GTIPRKITNF MGGWWSGMPTLS+++ FL KV EKFPKD ELIV
Sbjct: 121 GSTWIPIFNVDDGLDVGTIPRKITNFAMGGWWSGMPTLSFDNLFLPKVAEKFPKDAELIV 180

Query: 178 ACQKGLRSLAACELLYNAGYKNLFWVQGGLEAAEDEDLVVEGPVPLKFAGIGGVSEFLGW 237
           ACQKGLRSLAACELLYNAGY NLFWVQGG +AAE+EDLVVEG  PLKFAGIGGVSEFLGW
Sbjct: 181 ACQKGLRSLAACELLYNAGYTNLFWVQGGFDAAEEEDLVVEGSAPLKFAGIGGVSEFLGW 240

Query: 238 TDQQRAAAAKEGWGYRLVFSARLLGILLAADALFIGAQQIGHYLQEIRTH 287
           TDQQRAAAAKEGWGYRLVFSARL+G+   ADALFIGAQQIG YLQEIRTH
Sbjct: 241 TDQQRAAAAKEGWGYRLVFSARLIGVFFVADALFIGAQQIGRYLQEIRTH 290


>Medtr4g015860.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr4:4822257-4824344 |
           20130731
          Length = 224

 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 95/161 (59%), Gaps = 2/161 (1%)

Query: 77  LIRDGKVKVLTPREAGYAVQLSNKPLLDVRPSNEHYKAWVRGSTWIPIFDVDHTLDAGTI 136
           LI  G ++ + P++A   +      LLDVRP+ E  KA V+GS  +P+F  D      T+
Sbjct: 52  LIESGTIRTILPKDASTVMNSEGFVLLDVRPNWEREKAHVKGSLHVPMFVEDKDNGPLTL 111

Query: 137 PRKITNFVMGGWWSGMPTLSYESQFLAKVEEKFP-KDTELIVACQKGLRSLAACELLYNA 195
            +K  +F   G W+G    ++ S+FL++VE   P K T+++VAC +GLRS+ A   LYN 
Sbjct: 112 LKKWVHFGYIGAWTGQYLTTFNSEFLSQVENVVPGKGTKVLVACGEGLRSMTATSKLYNG 171

Query: 196 GYKNLFWVQGGLEAAEDEDLV-VEGPVPLKFAGIGGVSEFL 235
           GY+NL W+ GG   ++D+D   VEG   LK+A IGG S + 
Sbjct: 172 GYRNLGWLVGGFSRSKDDDFSDVEGKEKLKYATIGGASYYF 212


>Medtr7g092820.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr7:36835880-36832869 |
           20130731
          Length = 234

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 6/192 (3%)

Query: 45  CWKGVVRVQAESEDFELKQMRDMAAARKRWEALIRDGKVKVLTPREAGYAVQLSNKPLLD 104
           CW  V    A S   +L     M   RK++       ++K +T  +A   V++    +LD
Sbjct: 15  CWLVVKTHNARSMPGKLVSQCKM---RKKFTI---KAEIKFVTADDAKELVKVDGYNVLD 68

Query: 105 VRPSNEHYKAWVRGSTWIPIFDVDHTLDAGTIPRKITNFVMGGWWSGMPTLSYESQFLAK 164
           VR  +++ +A ++    +P+F  +   D GT   +  +    G + G+P       F+  
Sbjct: 69  VRDKSQYERAHIKTCYHVPLFVENTDNDPGTFLLRTVHNNFSGLFFGIPFTRPNPDFVQS 128

Query: 165 VEEKFPKDTELIVACQKGLRSLAACELLYNAGYKNLFWVQGGLEAAEDEDLVVEGPVPLK 224
           V+ +   +T+L++ CQ+GLRS AA   L +AG++N+  +  GL+  +       G   L+
Sbjct: 129 VKSQIQPETKLLIVCQEGLRSAAAANKLEDAGFQNVACITSGLQTVKPGTFESVGSTELQ 188

Query: 225 FAGIGGVSEFLG 236
            AG  G+ +  G
Sbjct: 189 NAGKAGLVQIQG 200


>Medtr3g092040.1 | rhodanese/cell cycle control phosphatase
           superfamily protein | HC | chr3:42011518-42013354 |
           20130731
          Length = 232

 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 18/153 (11%)

Query: 77  LIRDGKVKVLTPREAGYAVQLSNKPLLDVRPSNEHYKAWVRGSTWIPIFDVDHTLDAGTI 136
           L+   +VK + P+EA    + +N  +LDVRP  E  +     +  + ++ +     A  I
Sbjct: 78  LLLQKRVKSVEPKEALRLQKENNFVILDVRPEAEFKEGHPPDAINVQVYRLIKEWTAWDI 137

Query: 137 PRKITNFVMGGWWSGMPTLSYESQFLAKVEEKFPKDTELIVACQKG-------------- 182
            R+   F   G +SG        +F+  V E+  K+ ++IVAC  G              
Sbjct: 138 ARRAA-FAFFGIFSGT---EENPEFIKSVGEQLDKNAKIIVACSAGGTMKPTQNLPQGQQ 193

Query: 183 LRSLAACELLYNAGYKNLFWVQGGLEAAEDEDL 215
            RSL A  LL   GY N+F ++GGL     EDL
Sbjct: 194 SRSLIAAYLLVLNGYNNVFHLEGGLYKWFKEDL 226