Miyakogusa Predicted Gene

Lj0g3v0297949.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0297949.2 tr|G7L2Z5|G7L2Z5_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_7g116580 PE=4
SV=1,50.52,3e-19,seg,NULL,CUFF.20000.2
         (183 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g116580.1 | F-box protein | LC | chr7:48109343-48106729 | ...    99   2e-21
Medtr7g117735.1 | hypothetical protein | LC | chr7:48895721-4889...    91   9e-19
Medtr1g111630.1 | F-box/RNI superfamily protein | LC | chr1:5045...    87   6e-18
Medtr7g114090.1 | F-box/RNI superfamily protein, putative | HC |...    84   8e-17
Medtr7g116260.1 | hypothetical protein | HC | chr7:47928843-4792...    72   2e-13

>Medtr7g116580.1 | F-box protein | LC | chr7:48109343-48106729 |
           20130731
          Length = 488

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 6/97 (6%)

Query: 93  PEFNPRLRQIRDVQTFSHGEIKVIELGDCVGNFYEIEIAMNALKYFHKLERIILSP---- 148
           P+     + IRDV+TFSH E+KVIELG CVGN+YEIE  MN LKY HKLE+I++SP    
Sbjct: 392 PKLFDNQKDIRDVETFSHDEVKVIELGGCVGNWYEIEFVMNVLKYAHKLEQIVVSPFWRE 451

Query: 149 --SKCWKHDRTWPQNGRERILAKLQSEGIGLDKLVLI 183
             S  WK +  W Q GRE++  KL  + +  +KLV++
Sbjct: 452 DESLDWKSNPIWFQGGREKLSEKLSGQVVQGEKLVIV 488


>Medtr7g117735.1 | hypothetical protein | LC |
           chr7:48895721-48895990 | 20130731
          Length = 89

 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 7/89 (7%)

Query: 102 IRDVQTFSHGEIKVIELGDCVGNFYEIEIAMNALKYFHKLERIILSP------SKCWKHD 155
           +RDV+TFSH E+K+IELG CVGN++EIE  MN LKY HKL++II+ P      +  W   
Sbjct: 1   MRDVETFSHDEVKIIELGGCVGNWFEIEFVMNVLKYCHKLQQIIVGPYWRESDTLDWNSY 60

Query: 156 RTWPQNGRERILAKLQS-EGIGLDKLVLI 183
             W Q+GR R+  KLQ  E +GL+KLVL+
Sbjct: 61  HLWFQSGRRRMSQKLQDKEIVGLEKLVLV 89


>Medtr1g111630.1 | F-box/RNI superfamily protein | LC |
           chr1:50457912-50460586 | 20130731
          Length = 437

 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 8/88 (9%)

Query: 104 DVQTFSHGEIKVIELGDCVGNFYEIEIAMNALKYFHKLERIILSP------SKCWKHD-R 156
           DV+  SH EI+VIELG CVGN+YEIE  MNALKY  K ERI+LSP      S  WK D  
Sbjct: 350 DVEICSHDEIRVIELGGCVGNWYEIEFVMNALKYAQKHERIVLSPYRREHDSVDWKSDPP 409

Query: 157 TWPQNGRERILAKLQSEG-IGLDKLVLI 183
            W QNG +RI  KLQSE  +G +K+V +
Sbjct: 410 VWSQNGCQRIRQKLQSEDVVGREKVVFV 437


>Medtr7g114090.1 | F-box/RNI superfamily protein, putative | HC |
           chr7:47052612-47050565 | 20130731
          Length = 473

 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 65/115 (56%), Gaps = 9/115 (7%)

Query: 78  LVVPPPLLSDTKIK--RPEFNPRLRQIRDVQTFSHGEIKVIELGDCVGNFYEIEIAMNAL 135
           ++   PLL    I    PEF    + IRDV+  SH +I+VIEL  CVGN+YEIE   N L
Sbjct: 359 MLQASPLLQKLSIMFLAPEFFENQKDIRDVEILSHDDIRVIELRGCVGNWYEIEFVKNVL 418

Query: 136 KYFHKLERIILSP------SKCWKHDRTWPQNGRERILAKLQSE-GIGLDKLVLI 183
           K  HKLE+I+LSP         W     W + GRER+  KL+ E  +G +KLV I
Sbjct: 419 KCAHKLEQIVLSPYWTEVDGFSWNSHPLWFKGGRERMGEKLKDEVVVGREKLVFI 473


>Medtr7g116260.1 | hypothetical protein | HC |
           chr7:47928843-47929718 | 20130731
          Length = 133

 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 67  DCCDLLFQETPLVVPPPLLS-DTKIKRPEFNPRLRQIRDVQTFSHGEIKVIELGDCVGNF 125
           D C LL+    L   P L         P F+     I DV  FSH E+KVIE G CVGN+
Sbjct: 36  DECSLLWILNILQASPLLQKLSVMFAHPRFHENQNDIMDVGVFSHNEVKVIEFGGCVGNW 95

Query: 126 YEIEIAMNALKYFHKLERIILS 147
           +EIE  MN +KY HKLE+I+++
Sbjct: 96  FEIEFVMNVIKYAHKLEKIVMT 117