Miyakogusa Predicted Gene

Lj0g3v0297469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0297469.1 Non Characterized Hit- tr|I1L3D6|I1L3D6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45463
PE,69.35,0,LIM_bind,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; seg,NULL,CUFF.19961.1
         (853 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g089075.2 | transcriptional corepressor SEUSS-like protein...   349   6e-96
Medtr3g089075.1 | transcriptional corepressor SEUSS-like protein...   349   6e-96
Medtr1g029400.1 | transcriptional corepressor SEUSS-like protein...   340   4e-93
Medtr1g029400.2 | transcriptional corepressor SEUSS-like protein...   340   4e-93

>Medtr3g089075.2 | transcriptional corepressor SEUSS-like protein |
           HC | chr3:40781704-40775494 | 20130731
          Length = 891

 Score =  349 bits (896), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 157/282 (55%), Positives = 210/282 (74%), Gaps = 8/282 (2%)

Query: 286 SSVKRPYDSGVNGVCARRLMQYLYHQRERRNDNSIAYWRKFVVEYYSPRAKQRWCLSLYN 345
           S VK  Y+ G+   CARRL  Y+Y Q+ R  DN+I +WRKFV EYY+P AK++WC+S+Y 
Sbjct: 314 SPVKPAYEPGM---CARRLTHYMYQQQHRPEDNNIEFWRKFVAEYYAPNAKKKWCVSMYG 370

Query: 346 NVANHALGVFPQVSMDAWQCDICGSKSGKGFEATFDVLPRLNEIKFGSGVIDELLFLDLP 405
           + +    GVFPQ   D W C+IC  K G+GFEAT +VLPRL +IK+ SG ++ELL++D+P
Sbjct: 371 S-SRQTTGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMP 426

Query: 406 HESKLPSGAMVLEYQKAVQECVYEQLRVVREGKLRIIFTQDLKIFSWEFCARRHEELLPR 465
            E    SG +VL+Y KA+QE V+EQLRVVR+G+LRI+F+ DLKI SWEFCARRHEEL+PR
Sbjct: 427 REYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPR 486

Query: 466 KFVAPRVNQLVQVAQKCQSTIAQSGSDGVSQEDLKTNSNMVLTAGRQLAKSLELPSLNDL 525
           + + P+V+Q+  VAQK Q+ + Q+ +   S  +L+ N NM + + RQLAK+LE+P +NDL
Sbjct: 487 RLLIPQVSQIGAVAQKYQA-LTQNATPNASAPELQNNCNMFVASARQLAKALEVPLVNDL 545

Query: 526 GFSKRYVRCLQIAEVCSSMKDLIDICYEHKIGPIESLKNFPR 567
           G++KRYVRCLQI+EV +SMKDLID   E   GP+ESL  FPR
Sbjct: 546 GYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPR 587


>Medtr3g089075.1 | transcriptional corepressor SEUSS-like protein |
           HC | chr3:40781704-40775494 | 20130731
          Length = 891

 Score =  349 bits (896), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 157/282 (55%), Positives = 210/282 (74%), Gaps = 8/282 (2%)

Query: 286 SSVKRPYDSGVNGVCARRLMQYLYHQRERRNDNSIAYWRKFVVEYYSPRAKQRWCLSLYN 345
           S VK  Y+ G+   CARRL  Y+Y Q+ R  DN+I +WRKFV EYY+P AK++WC+S+Y 
Sbjct: 314 SPVKPAYEPGM---CARRLTHYMYQQQHRPEDNNIEFWRKFVAEYYAPNAKKKWCVSMYG 370

Query: 346 NVANHALGVFPQVSMDAWQCDICGSKSGKGFEATFDVLPRLNEIKFGSGVIDELLFLDLP 405
           + +    GVFPQ   D W C+IC  K G+GFEAT +VLPRL +IK+ SG ++ELL++D+P
Sbjct: 371 S-SRQTTGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMP 426

Query: 406 HESKLPSGAMVLEYQKAVQECVYEQLRVVREGKLRIIFTQDLKIFSWEFCARRHEELLPR 465
            E    SG +VL+Y KA+QE V+EQLRVVR+G+LRI+F+ DLKI SWEFCARRHEEL+PR
Sbjct: 427 REYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPR 486

Query: 466 KFVAPRVNQLVQVAQKCQSTIAQSGSDGVSQEDLKTNSNMVLTAGRQLAKSLELPSLNDL 525
           + + P+V+Q+  VAQK Q+ + Q+ +   S  +L+ N NM + + RQLAK+LE+P +NDL
Sbjct: 487 RLLIPQVSQIGAVAQKYQA-LTQNATPNASAPELQNNCNMFVASARQLAKALEVPLVNDL 545

Query: 526 GFSKRYVRCLQIAEVCSSMKDLIDICYEHKIGPIESLKNFPR 567
           G++KRYVRCLQI+EV +SMKDLID   E   GP+ESL  FPR
Sbjct: 546 GYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPR 587


>Medtr1g029400.1 | transcriptional corepressor SEUSS-like protein |
           HC | chr1:10071239-10080236 | 20130731
          Length = 911

 Score =  340 bits (872), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 151/275 (54%), Positives = 206/275 (74%), Gaps = 5/275 (1%)

Query: 298 GVCARRLMQYLYHQRERRNDNSIAYWRKFVVEYYSPRAKQRWCLSLYNNVANHALGVFPQ 357
           G+CARRL  Y+Y Q+ R  DN+I +WRKFV EY++P AK++WC+S+Y +      GVFPQ
Sbjct: 333 GMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGS-GRQTTGVFPQ 391

Query: 358 VSMDAWQCDICGSKSGKGFEATFDVLPRLNEIKFGSGVIDELLFLDLPHESKLPSGAMVL 417
              D W C+IC  K G+GFEAT +VLPRL +IK+ SG ++ELL++D+P E    SG +VL
Sbjct: 392 ---DIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVL 448

Query: 418 EYQKAVQECVYEQLRVVREGKLRIIFTQDLKIFSWEFCARRHEELLPRKFVAPRVNQLVQ 477
           +Y KA+QE V+EQLRVVR+G+LRI+F+ DLKI SWEFCARRHEEL+PR+ + P+V+QL  
Sbjct: 449 DYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGT 508

Query: 478 VAQKCQSTIAQSGSDGVSQEDLKTNSNMVLTAGRQLAKSLELPSLNDLGFSKRYVRCLQI 537
           VAQK Q+   Q+ +   S  +L+ N N+ + + RQLAK+LE+P +NDLG++KRYVRCLQI
Sbjct: 509 VAQKYQA-CTQNAAANQSVPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCLQI 567

Query: 538 AEVCSSMKDLIDICYEHKIGPIESLKNFPRLATSA 572
           +EV +SMKDLID   E   GP++SL  FPR  +++
Sbjct: 568 SEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSNS 602


>Medtr1g029400.2 | transcriptional corepressor SEUSS-like protein |
           HC | chr1:10071239-10080236 | 20130731
          Length = 911

 Score =  340 bits (872), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 151/275 (54%), Positives = 206/275 (74%), Gaps = 5/275 (1%)

Query: 298 GVCARRLMQYLYHQRERRNDNSIAYWRKFVVEYYSPRAKQRWCLSLYNNVANHALGVFPQ 357
           G+CARRL  Y+Y Q+ R  DN+I +WRKFV EY++P AK++WC+S+Y +      GVFPQ
Sbjct: 333 GMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGS-GRQTTGVFPQ 391

Query: 358 VSMDAWQCDICGSKSGKGFEATFDVLPRLNEIKFGSGVIDELLFLDLPHESKLPSGAMVL 417
              D W C+IC  K G+GFEAT +VLPRL +IK+ SG ++ELL++D+P E    SG +VL
Sbjct: 392 ---DIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVL 448

Query: 418 EYQKAVQECVYEQLRVVREGKLRIIFTQDLKIFSWEFCARRHEELLPRKFVAPRVNQLVQ 477
           +Y KA+QE V+EQLRVVR+G+LRI+F+ DLKI SWEFCARRHEEL+PR+ + P+V+QL  
Sbjct: 449 DYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGT 508

Query: 478 VAQKCQSTIAQSGSDGVSQEDLKTNSNMVLTAGRQLAKSLELPSLNDLGFSKRYVRCLQI 537
           VAQK Q+   Q+ +   S  +L+ N N+ + + RQLAK+LE+P +NDLG++KRYVRCLQI
Sbjct: 509 VAQKYQA-CTQNAAANQSVPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCLQI 567

Query: 538 AEVCSSMKDLIDICYEHKIGPIESLKNFPRLATSA 572
           +EV +SMKDLID   E   GP++SL  FPR  +++
Sbjct: 568 SEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSNS 602