Miyakogusa Predicted Gene
- Lj0g3v0297399.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0297399.1 Non Characterized Hit- tr|D8G0N1|D8G0N1_9CYAN
Putative uncharacterized protein OS=Oscillatoria sp.
P,35.12,1e-18,seg,NULL; DUF1517,Protein of unknown function DUF1517;
PROKAR_LIPOPROTEIN,NULL,CUFF.19945.1
(333 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g063940.2 | transmembrane protein, putative | HC | chr3:28... 217 1e-56
Medtr3g063940.1 | transmembrane protein, putative | HC | chr3:28... 217 1e-56
Medtr3g063950.1 | transmembrane protein, putative | LC | chr3:28... 204 8e-53
Medtr7g114660.1 | plant/F20D21-34 protein | HC | chr7:47343543-4... 176 2e-44
Medtr8g465010.1 | DUF1517 family protein | LC | chr8:23097779-23... 172 3e-43
Medtr3g063940.3 | transmembrane protein, putative | HC | chr3:28... 145 6e-35
Medtr8g031500.1 | plant/F20D21-34 protein | LC | chr8:11828564-1... 70 3e-12
>Medtr3g063940.2 | transmembrane protein, putative | HC |
chr3:28768782-28763981 | 20130731
Length = 335
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/278 (47%), Positives = 176/278 (63%), Gaps = 14/278 (5%)
Query: 66 RREEEAHSSPGDADG---LGWGTHGGVLMFLXXXXXXXXXXXC-KDTDAN--TITLCKLQ 119
R + SP DG + G +G ++ F+ KD + N ++T+ KLQ
Sbjct: 62 REHHHMYDSPPHHDGDDKVASGGNGPLVFFMIFAFGIFFVGFWNKDANGNRNSVTVLKLQ 121
Query: 120 VAMFGGSKGSSIQRDLTRIAKAADTSSREGVSHLLTETIQALDRHPSYSIAGYSSVGQKQ 179
V M G++IQRDL RIA+AA+TSSREGV +LL ET+Q LD+H + +AGYSSV K+
Sbjct: 122 VGMLV-EVGNTIQRDLARIAEAANTSSREGVCNLLKETMQTLDQHHGFCVAGYSSVDLKR 180
Query: 180 SMEDGKKCYDQLSNEERGKFDKETLVNLFNVEK---RSQSINEFINEDTSLNVKESTTES 236
S +DG+KCY+QLSNEER KFD+ETLVNL + K RSQS ++ NE+++ +V++S+ E+
Sbjct: 181 SKDDGEKCYNQLSNEERAKFDEETLVNLTDNHKTIIRSQSYDKIGNENSTFDVRKSSEEA 240
Query: 237 QKFXXXXXXXXXXXXYIVVTILVAAKGAHKLPN-NGAEDLKKALQXXXXXXXXXXXXXAG 295
+KF YIV+ +LVA KGAHKLP+ NGAEDLK+ L AG
Sbjct: 241 EKFETEKLLDGPDNKYIVIILLVAVKGAHKLPDINGAEDLKEVLP-KLKSLISSKYLLAG 299
Query: 296 EVLWTPLKEGDTLSERKLLEDYPQLAECMKSFIVKKQE 333
EVLWTP KE DT+S+ KLL+DY QLA+ MK I KK E
Sbjct: 300 EVLWTPQKENDTVSDAKLLKDYLQLAKSMK--ISKKHE 335
>Medtr3g063940.1 | transmembrane protein, putative | HC |
chr3:28768782-28763981 | 20130731
Length = 335
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/278 (47%), Positives = 176/278 (63%), Gaps = 14/278 (5%)
Query: 66 RREEEAHSSPGDADG---LGWGTHGGVLMFLXXXXXXXXXXXC-KDTDAN--TITLCKLQ 119
R + SP DG + G +G ++ F+ KD + N ++T+ KLQ
Sbjct: 62 REHHHMYDSPPHHDGDDKVASGGNGPLVFFMIFAFGIFFVGFWNKDANGNRNSVTVLKLQ 121
Query: 120 VAMFGGSKGSSIQRDLTRIAKAADTSSREGVSHLLTETIQALDRHPSYSIAGYSSVGQKQ 179
V M G++IQRDL RIA+AA+TSSREGV +LL ET+Q LD+H + +AGYSSV K+
Sbjct: 122 VGMLV-EVGNTIQRDLARIAEAANTSSREGVCNLLKETMQTLDQHHGFCVAGYSSVDLKR 180
Query: 180 SMEDGKKCYDQLSNEERGKFDKETLVNLFNVEK---RSQSINEFINEDTSLNVKESTTES 236
S +DG+KCY+QLSNEER KFD+ETLVNL + K RSQS ++ NE+++ +V++S+ E+
Sbjct: 181 SKDDGEKCYNQLSNEERAKFDEETLVNLTDNHKTIIRSQSYDKIGNENSTFDVRKSSEEA 240
Query: 237 QKFXXXXXXXXXXXXYIVVTILVAAKGAHKLPN-NGAEDLKKALQXXXXXXXXXXXXXAG 295
+KF YIV+ +LVA KGAHKLP+ NGAEDLK+ L AG
Sbjct: 241 EKFETEKLLDGPDNKYIVIILLVAVKGAHKLPDINGAEDLKEVLP-KLKSLISSKYLLAG 299
Query: 296 EVLWTPLKEGDTLSERKLLEDYPQLAECMKSFIVKKQE 333
EVLWTP KE DT+S+ KLL+DY QLA+ MK I KK E
Sbjct: 300 EVLWTPQKENDTVSDAKLLKDYLQLAKSMK--ISKKHE 335
>Medtr3g063950.1 | transmembrane protein, putative | LC |
chr3:28776329-28771116 | 20130731
Length = 326
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 128/260 (49%), Positives = 159/260 (61%), Gaps = 13/260 (5%)
Query: 72 HSSPGDADGLGWGTHGGVLMFLXXXXXXXXXXXCKDTDAN--TITLCKLQVAMFGGSKGS 129
H+ P +G GG L C+ T+ N +T+ KLQV M G
Sbjct: 72 HARPKSTNG-----EGGSAFLLMVGIMVVIYVVCRCTENNDTPVTVLKLQVGMLD-EMGC 125
Query: 130 SIQRDLTRIAKAADTSSREGVSHLLTETIQALDRHPSYSIAGYSSVGQKQSMEDGKKCYD 189
++QRDL RIA+AA+TSS+EGV LL ETIQ LD+H Y IAGYSSV K+S E G+ CY+
Sbjct: 126 TLQRDLARIAEAANTSSKEGVRCLLKETIQTLDKHHGYCIAGYSSVDLKRSEEGGETCYN 185
Query: 190 QLSNEERGKFDKETLVNLFNVEK---RSQSINEFINEDTSLNVKESTTESQKFXXXXXXX 246
QLS EER KFD ETLVNL N K RSQS + F NE ++ +VK++ E++K
Sbjct: 186 QLSIEEREKFDGETLVNLSNNNKTRIRSQSYDRFSNEYSTFDVKKNAEETEKLEKEKLRS 245
Query: 247 XXXXXYIVVTILVAAKGAHKLPN-NGAEDLKKALQXXXXXXXXXXXXXAGEVLWTPLKEG 305
YIVVTILVA +G+H+LPN AEDLK+ALQ AGEVLWTP KE
Sbjct: 246 GFDNKYIVVTILVATRGSHELPNMKAAEDLKEALQ-KLKSHLYWRDLLAGEVLWTPQKED 304
Query: 306 DTLSERKLLEDYPQLAECMK 325
+TLS+ KLL+DYPQLA+ MK
Sbjct: 305 ETLSDGKLLKDYPQLAKSMK 324
>Medtr7g114660.1 | plant/F20D21-34 protein | HC |
chr7:47343543-47349072 | 20130731
Length = 390
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 133/215 (61%), Gaps = 36/215 (16%)
Query: 110 ANTITLCKLQVAMFGGSKGSSIQRDLTRIAKAADTSSREGVSHLLTETIQALDRHPSYSI 169
A T+ KLQV + G G S+QRDL RIA+ ADTSS EG++++LTET AL RHP Y I
Sbjct: 205 AGKTTVLKLQVGLLG--MGRSLQRDLNRIAEVADTSSPEGLNYILTETSLALLRHPDYCI 262
Query: 170 AGYSSVGQKQSMEDGKKCYDQLSNEERGKFDKETLVNLFNVEK---RSQSINEFINEDTS 226
+GYSSV K+ +E+G+K ++QLS EERGKFD+ETLVN+ N+++ RSQ N F NE
Sbjct: 263 SGYSSVDIKRGIEEGEKRFNQLSIEERGKFDEETLVNVNNIKRQSTRSQRSNGFSNE--- 319
Query: 227 LNVKESTTESQKFXXXXXXXXXXXXYIVVTILVAAKGAHKLPN-NGAEDLKKALQXXXXX 285
YIV+TIL AA+G HKLP NG+ +LK+ALQ
Sbjct: 320 -------------------------YIVITILAAAEGEHKLPGINGSGNLKEALQKLGSI 354
Query: 286 XXXXXXXXAGEVLWTPLKEGDTLSERKLLEDYPQL 320
A EVLWTP E DTLSER+LLEDYP L
Sbjct: 355 PSSKLL--AVEVLWTPQNENDTLSERELLEDYPLL 387
>Medtr8g465010.1 | DUF1517 family protein | LC |
chr8:23097779-23093536 | 20130731
Length = 385
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 133/217 (61%), Gaps = 36/217 (16%)
Query: 108 TDANTITLCKLQVAMFGGSKGSSIQRDLTRIAKAADTSSREGVSHLLTETIQALDRHPSY 167
T A T+ KLQV + G G S+QRDL RIA+ ADTSS EG++++LTET AL RHP Y
Sbjct: 198 TAAGKTTVLKLQVGLLG--TGRSLQRDLNRIAEVADTSSPEGLNYILTETSLALLRHPDY 255
Query: 168 SIAGYSSVGQKQSMEDGKKCYDQLSNEERGKFDKETLVNLFNVEK---RSQSINEFINED 224
I+ YSSV K+ +E+G++C++QLS EERGKFD ETLVN+ N+++ RSQ N NE
Sbjct: 256 CISVYSSVDIKRGIEEGEECFNQLSIEERGKFDDETLVNVDNIKRQSTRSQISNGCSNE- 314
Query: 225 TSLNVKESTTESQKFXXXXXXXXXXXXYIVVTILVAAKGAHKLPN-NGAEDLKKALQXXX 283
YIV+TIL AA+G HKLP+ NG+ +LK+ALQ
Sbjct: 315 ---------------------------YIVITILAAAEGEHKLPSINGSGNLKEALQKLG 347
Query: 284 XXXXXXXXXXAGEVLWTPLKEGDTLSERKLLEDYPQL 320
A EVLWTP E DTLSER+LLEDYP L
Sbjct: 348 SIPSSKLL--AVEVLWTPQDENDTLSERELLEDYPLL 382
>Medtr3g063940.3 | transmembrane protein, putative | HC |
chr3:28768782-28763981 | 20130731
Length = 274
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 124/199 (62%), Gaps = 10/199 (5%)
Query: 66 RREEEAHSSPGDADG---LGWGTHGGVLMFLXXXXXXXXXXXC-KDTDAN--TITLCKLQ 119
R + SP DG + G +G ++ F+ KD + N ++T+ KLQ
Sbjct: 62 REHHHMYDSPPHHDGDDKVASGGNGPLVFFMIFAFGIFFVGFWNKDANGNRNSVTVLKLQ 121
Query: 120 VAMFGGSKGSSIQRDLTRIAKAADTSSREGVSHLLTETIQALDRHPSYSIAGYSSVGQKQ 179
V M G++IQRDL RIA+AA+TSSREGV +LL ET+Q LD+H + +AGYSSV K+
Sbjct: 122 VGMLV-EVGNTIQRDLARIAEAANTSSREGVCNLLKETMQTLDQHHGFCVAGYSSVDLKR 180
Query: 180 SMEDGKKCYDQLSNEERGKFDKETLVNLFNVEK---RSQSINEFINEDTSLNVKESTTES 236
S +DG+KCY+QLSNEER KFD+ETLVNL + K RSQS ++ NE+++ +V++S+ E+
Sbjct: 181 SKDDGEKCYNQLSNEERAKFDEETLVNLTDNHKTIIRSQSYDKIGNENSTFDVRKSSEEA 240
Query: 237 QKFXXXXXXXXXXXXYIVV 255
+KF YIV+
Sbjct: 241 EKFETEKLLDGPDNKYIVL 259
>Medtr8g031500.1 | plant/F20D21-34 protein | LC |
chr8:11828564-11825656 | 20130731
Length = 345
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 107 DTDANTITLCKLQVAMFGGSKGSSIQRDLTRIAKAADTSSREGVSHLLTETIQALDRHPS 166
+T A T+ KLQV + G + S+QRDL RIA+ ADTSS EG++++LTET AL RH
Sbjct: 212 NTAAVKTTVLKLQVGLLGTVR--SLQRDLNRIAEVADTSSPEGLNYILTETSLALIRHLD 269
Query: 167 YSIAGYSSV 175
Y I+GYSS+
Sbjct: 270 YCISGYSSI 278
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 252 YIVVTILVAAKGAHKLPN-NGAEDLKKALQXXXXXXXXXXXXXAGEVLWTPLKEGDTLSE 310
Y +TIL AA+G HKLP+ NG+ LK+ALQ A EVLWTP E DTL E
Sbjct: 275 YSSITILAAAEGEHKLPSINGSGKLKEALQKLVSIPSSKLL--AVEVLWTPQDENDTLLE 332
Query: 311 RKLLEDYPQL 320
R+LLEDYP L
Sbjct: 333 RELLEDYPLL 342