Miyakogusa Predicted Gene

Lj0g3v0296709.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0296709.1 Non Characterized Hit- tr|I1MNU8|I1MNU8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55987
PE,81.54,0,IF4E,Translation Initiation factor eIF- 4e; no
description,Translation Initiation factor eIF- 4e-lik,CUFF.19897.1
         (130 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g029230.1 | eukaryotic translation initiation factor 4E | ...   184   1e-47
Medtr1g045130.1 | eukaryotic translation initiation factor 4E | ...    70   3e-13
Medtr2g018260.1 | eukaryotic translation initiation factor 4E | ...    64   5e-11

>Medtr6g029230.1 | eukaryotic translation initiation factor 4E | HC
           | chr6:10050929-10046047 | 20130731
          Length = 226

 Score =  184 bits (468), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 84/105 (80%), Positives = 94/105 (89%), Gaps = 1/105 (0%)

Query: 26  QLAPDANNYCNEEAEERQARDLKAGLHPLKHKFVFWYTRRSPGVRTQTSYEDNIKKIVDF 85
           Q+   +++Y  +E EERQ+R+LKAGLHPLK KFVFWYTRR PG+R Q SYEDNIKKIV+F
Sbjct: 22  QIVDSSDSYNVKETEERQSRELKAGLHPLKSKFVFWYTRRVPGIRNQ-SYEDNIKKIVEF 80

Query: 86  STVEGFWVCYCHLARPSTLPSPTDLHLFKEGIRPLWEDSANCNGG 130
           STVEGFWVCYCHLARPS+LP PTDLHLFKEGIRPLWEDSANCNGG
Sbjct: 81  STVEGFWVCYCHLARPSSLPIPTDLHLFKEGIRPLWEDSANCNGG 125


>Medtr1g045130.1 | eukaryotic translation initiation factor 4E | HC
           | chr1:16942496-16946218 | 20130731
          Length = 205

 Score = 70.5 bits (171), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 52  HPLKHKFVFWYTRRSPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSTLPSPTDLH 111
           H L+ ++ FWY  +S   +   ++   ++K+  F TVE FW  +  + +PS LPS  D H
Sbjct: 31  HKLERRWTFWYDNQSK-PKQGAAWGSTLRKVYSFDTVEEFWCLHDQIFKPSKLPSNADFH 89

Query: 112 LFKEGIRPLWEDSANCNGG 130
           LFK+GI P WED    NGG
Sbjct: 90  LFKDGIEPKWEDPECANGG 108


>Medtr2g018260.1 | eukaryotic translation initiation factor 4E | HC
           | chr2:5746639-5743329 | 20130731
          Length = 225

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 5/99 (5%)

Query: 35  CNEEAEERQARDLKAG--LHPLKHKFVFWYTRRSPGVRT-QTSYEDNIKKIVDFSTVEGF 91
            N++     ++ L AG   HPL++ + FW+   +P  ++ Q ++  +I+ +  FSTVE F
Sbjct: 31  INDDDSSAISKPLTAGHQSHPLENSWTFWFD--NPQTKSKQQAWGSSIRPVYTFSTVEEF 88

Query: 92  WVCYCHLARPSTLPSPTDLHLFKEGIRPLWEDSANCNGG 130
           W  Y ++  PS L    D H FK  I P WED    NGG
Sbjct: 89  WSIYNNIHHPSKLAIGADFHCFKHKIEPKWEDPICANGG 127