Miyakogusa Predicted Gene

Lj0g3v0296529.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0296529.1 Non Characterized Hit- tr|I1JPI6|I1JPI6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,61.97,2e-19,
,CUFF.19874.1
         (149 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0123s0070.1 | myb transcription factor | HC | scaffold0123:...   258   2e-69
Medtr0123s0070.2 | myb transcription factor | HC | scaffold0123:...   213   4e-56
Medtr8g028655.1 | myb transcription factor | HC | chr8:10999892-...   124   3e-29
Medtr1g067000.2 | myb transcription factor | HC | chr1:28822118-...   103   8e-23
Medtr1g067000.1 | myb transcription factor | HC | chr1:28822118-...   103   8e-23

>Medtr0123s0070.1 | myb transcription factor | HC |
           scaffold0123:45193-37242 | 20130731
          Length = 307

 Score =  258 bits (658), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 123/149 (82%), Positives = 137/149 (91%)

Query: 1   MLKTPTINTAVSSWSNHTLQTTNLLHVPKVNNSCSSSESTPKVRPVGESNGQGNNSHPLR 60
           ML+TP +NT VSSWSNHTLQ TNLLHVPKVNNSCSS+ESTPKVRPVGESN Q N S PLR
Sbjct: 158 MLETPIMNTVVSSWSNHTLQNTNLLHVPKVNNSCSSTESTPKVRPVGESNNQVNKSLPLR 217

Query: 61  VLPDFSQVYGFIGSVFDPDATEHVQRLKQMDRIDVETVLLLMRNLSINLTSPDFEDHRKL 120
           VLPDFSQVY FIGSVFDP+A+EH+Q+LKQMDRIDVETVLLLMRNLSINLTSPDFEDH+KL
Sbjct: 218 VLPDFSQVYNFIGSVFDPEASEHLQKLKQMDRIDVETVLLLMRNLSINLTSPDFEDHKKL 277

Query: 121 LSSYEAEVEPNNYINAERPIHDEKLRSAT 149
           LSSYE ++E N+Y+N +RPIHDE L+SAT
Sbjct: 278 LSSYEVDLETNSYLNPDRPIHDEPLKSAT 306


>Medtr0123s0070.2 | myb transcription factor | HC |
           scaffold0123:45193-37193 | 20130731
          Length = 286

 Score =  213 bits (543), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 106/128 (82%), Positives = 114/128 (89%), Gaps = 2/128 (1%)

Query: 1   MLKTPTINTAVSSWSNHTLQTTNLLHVPKVNNSCSSSESTPKVRPVGESNGQGNNSHPLR 60
           ML+TP +NT VSSWSNHTLQ TNLLHVPKVNNSCSS+ESTPKVRPVGESN Q N S PLR
Sbjct: 158 MLETPIMNTVVSSWSNHTLQNTNLLHVPKVNNSCSSTESTPKVRPVGESNNQVNKSLPLR 217

Query: 61  VLPDFSQVYGFIGSVFDPDATEHVQRLKQMDRIDVETVLLLMRNLSINLTSPDFEDHRKL 120
           VLPDFSQVY FIGSVFDP+A+EH+Q+LKQMDRIDVETVLLLMRNLSINLTSPDFEDH   
Sbjct: 218 VLPDFSQVYNFIGSVFDPEASEHLQKLKQMDRIDVETVLLLMRNLSINLTSPDFEDHG-- 275

Query: 121 LSSYEAEV 128
           L+  E EV
Sbjct: 276 LNRPEGEV 283


>Medtr8g028655.1 | myb transcription factor | HC |
           chr8:10999892-11006608 | 20130731
          Length = 333

 Score =  124 bits (311), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 55/84 (65%), Positives = 70/84 (83%)

Query: 52  QGNNSHPLRVLPDFSQVYGFIGSVFDPDATEHVQRLKQMDRIDVETVLLLMRNLSINLTS 111
           +GN   P++V+PDF+QVY FIGSVFDP++T  +QRLKQMD I+VET LLLMRNLSINLTS
Sbjct: 233 EGNTGKPVKVMPDFAQVYRFIGSVFDPNSTNQLQRLKQMDPINVETSLLLMRNLSINLTS 292

Query: 112 PDFEDHRKLLSSYEAEVEPNNYIN 135
           P+FEDH++LLSSY+ + E   + N
Sbjct: 293 PEFEDHKRLLSSYDPDCEKAKFAN 316


>Medtr1g067000.2 | myb transcription factor | HC |
           chr1:28822118-28815959 | 20130731
          Length = 298

 Score =  103 bits (256), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 76/117 (64%)

Query: 31  NNSCSSSESTPKVRPVGESNGQGNNSHPLRVLPDFSQVYGFIGSVFDPDATEHVQRLKQM 90
           N+  S  E T    P  +   QG  +  +  LPDF++VYGFIGSVFDPD   HVQ+LK+M
Sbjct: 181 NSGLSGVEDTNTRLPTSQIPTQGTQNPVIHGLPDFAEVYGFIGSVFDPDTNGHVQKLKEM 240

Query: 91  DRIDVETVLLLMRNLSINLTSPDFEDHRKLLSSYEAEVEPNNYINAERPIHDEKLRS 147
           D I+ ETVLLLMRNL++NL+SP+F+  +K +S+Y+   +     + ++  +DE  ++
Sbjct: 241 DPINFETVLLLMRNLTVNLSSPNFDPIKKAMSTYDENNDAVGVTDDKKQTNDESCQT 297


>Medtr1g067000.1 | myb transcription factor | HC |
           chr1:28822118-28815959 | 20130731
          Length = 298

 Score =  103 bits (256), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 76/117 (64%)

Query: 31  NNSCSSSESTPKVRPVGESNGQGNNSHPLRVLPDFSQVYGFIGSVFDPDATEHVQRLKQM 90
           N+  S  E T    P  +   QG  +  +  LPDF++VYGFIGSVFDPD   HVQ+LK+M
Sbjct: 181 NSGLSGVEDTNTRLPTSQIPTQGTQNPVIHGLPDFAEVYGFIGSVFDPDTNGHVQKLKEM 240

Query: 91  DRIDVETVLLLMRNLSINLTSPDFEDHRKLLSSYEAEVEPNNYINAERPIHDEKLRS 147
           D I+ ETVLLLMRNL++NL+SP+F+  +K +S+Y+   +     + ++  +DE  ++
Sbjct: 241 DPINFETVLLLMRNLTVNLSSPNFDPIKKAMSTYDENNDAVGVTDDKKQTNDESCQT 297