Miyakogusa Predicted Gene

Lj0g3v0296179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0296179.1 Non Characterized Hit- tr|I1JZW9|I1JZW9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22997
PE,73.68,0.00000000006,seg,NULL,CUFF.19841.1
         (98 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g106400.1 | hypothetical protein | HC | chr4:44130536-4412...    48   2e-06

>Medtr4g106400.1 | hypothetical protein | HC |
          chr4:44130536-44129479 | 20130731
          Length = 108

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)

Query: 1  MMMARTTLDFSSTFQ-QPNPTAIIMXXXXXXXXXXTLHDHHHYSLTTLSFITNIII 55
          MMMART+LDFSS FQ +P+PT II+          T   +HHY+ T+ SFITNIII
Sbjct: 3  MMMARTSLDFSSAFQLRPHPTTIIIIPSPSFPFSLTNIPNHHYTPTS-SFITNIII 57