Miyakogusa Predicted Gene

Lj0g3v0294619.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0294619.2 Non Characterized Hit- tr|I1KZ01|I1KZ01_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30298
PE,85.1,0,FAD/NAD(P)-binding domain,NULL; UBIH,Ubiquinone biosynthesis
hydroxylase, UbiH/UbiF/VisC/COQ6, conse,CUFF.19839.2
         (507 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g060550.3 | ubiquinone biosynthesis monooxygenase COQ6-lik...   889   0.0  
Medtr2g060550.2 | ubiquinone biosynthesis monooxygenase COQ6-lik...   889   0.0  
Medtr2g060550.1 | ubiquinone biosynthesis monooxygenase COQ6-lik...   889   0.0  
Medtr7g051960.1 | ubiquinone biosynthesis monooxygenase COQ6-lik...   777   0.0  
Medtr7g051967.1 | hypothetical protein | HC | chr7:18249512-1824...   107   2e-23

>Medtr2g060550.3 | ubiquinone biosynthesis monooxygenase COQ6-like
           protein | HC | chr2:25696497-25686530 | 20130731
          Length = 509

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/509 (83%), Positives = 456/509 (89%), Gaps = 2/509 (0%)

Query: 1   MNRVLKKTVSNVCALKITRKSFCTEVVKVAGSTTGDPSNEHGKKQSISKSIPEYDIAIVG 60
           MNRV+KKTVSNV ALKI RK FC++ VKV  ST   PSNEH KK  IS+ IPEYD+AIVG
Sbjct: 1   MNRVIKKTVSNVFALKIPRKCFCSQAVKVDASTNLLPSNEHEKKPIISQIIPEYDVAIVG 60

Query: 61  GGMVGMALACFLASMPLTKQLSVAIIDSNPALGSSLCIKKEDPPDPRVSTVTPATISFLR 120
           GGMVGMALACFLA MP+TKQLSVAIIDSNPAL S LCIKKEDPPDPRVSTVTPA+ISFL+
Sbjct: 61  GGMVGMALACFLACMPMTKQLSVAIIDSNPALSSGLCIKKEDPPDPRVSTVTPASISFLQ 120

Query: 121 DAGAWKYVEQNRHAYFNKMQVWDYTGFGYVRYDARDANKDFLGCVAENKVLHGALLSCMK 180
           +AGAWKYVEQNRHAYF KMQVWDYTGFGY RYDA D NKDFLGCVAENKVLH +LLSC+K
Sbjct: 121 EAGAWKYVEQNRHAYFKKMQVWDYTGFGYARYDAGDVNKDFLGCVAENKVLHSSLLSCIK 180

Query: 181 DSDFKQTIYPLRLTSMTLNTNSMSVVEENTASKDPLSAQG--AKLQLSDGSSIYAKLVVG 238
           DSDFK T YP RLTSMTLNTNSMSVVEENT SK+P  AQG  +KL+LSDGSSIYAKLVVG
Sbjct: 181 DSDFKTTFYPSRLTSMTLNTNSMSVVEENTPSKEPSPAQGHASKLELSDGSSIYAKLVVG 240

Query: 239 ADGGKSRVRDLAGFRTTGWNYSQNAIICTVEHASENQCAWQRFLPTGPIALLPMGDKFSN 298
           ADGGKSRVR+LAGF+TTGWNYSQNAIICTVEH S N CAWQRFLP GPIALLPMG+ FSN
Sbjct: 241 ADGGKSRVRELAGFKTTGWNYSQNAIICTVEHTSANHCAWQRFLPNGPIALLPMGENFSN 300

Query: 299 IVWTMSPAESNNRKSITEEDFLKDVNSALDDGYGPRPTSSLLGTRDVLSWFRNDAALSAN 358
           IVWTMSP ESN+RKSITEE FLKDVNSALD GYGP PTSS LG RD+ SW + D  LSAN
Sbjct: 301 IVWTMSPTESNDRKSITEEMFLKDVNSALDYGYGPHPTSSSLGARDIFSWLKMDGTLSAN 360

Query: 359 EFFEIPPKVVRLASERMVFPLSLRHANSYASKRVVLIGDAAHTVHPLAGQGVNLGFGDAF 418
           E FEIPPK +RLASERMVFPLSLRHANSYA+KRVVLIGDAAHT+HPLAGQGVNLGFGDA+
Sbjct: 361 EPFEIPPKAIRLASERMVFPLSLRHANSYATKRVVLIGDAAHTIHPLAGQGVNLGFGDAY 420

Query: 419 SLSRTIAEGIALGSDIGEVNLLRKYEAERKPANIMMMAVLDGFQKAYSIDFGPFNFLRAA 478
           SLSR IAEGIALGSDIGEVNLL+KYE ERKPAN+ MMA+LDGFQKAYSIDFGPFNFLR A
Sbjct: 421 SLSRVIAEGIALGSDIGEVNLLKKYEQERKPANVTMMAILDGFQKAYSIDFGPFNFLRGA 480

Query: 479 AFQGANYISPLKRSIISYASGDHKLPIFM 507
           AF+GAN++SPLKRSIISYASG+ KLPIF 
Sbjct: 481 AFRGANFVSPLKRSIISYASGERKLPIFF 509


>Medtr2g060550.2 | ubiquinone biosynthesis monooxygenase COQ6-like
           protein | HC | chr2:25696497-25686530 | 20130731
          Length = 509

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/509 (83%), Positives = 456/509 (89%), Gaps = 2/509 (0%)

Query: 1   MNRVLKKTVSNVCALKITRKSFCTEVVKVAGSTTGDPSNEHGKKQSISKSIPEYDIAIVG 60
           MNRV+KKTVSNV ALKI RK FC++ VKV  ST   PSNEH KK  IS+ IPEYD+AIVG
Sbjct: 1   MNRVIKKTVSNVFALKIPRKCFCSQAVKVDASTNLLPSNEHEKKPIISQIIPEYDVAIVG 60

Query: 61  GGMVGMALACFLASMPLTKQLSVAIIDSNPALGSSLCIKKEDPPDPRVSTVTPATISFLR 120
           GGMVGMALACFLA MP+TKQLSVAIIDSNPAL S LCIKKEDPPDPRVSTVTPA+ISFL+
Sbjct: 61  GGMVGMALACFLACMPMTKQLSVAIIDSNPALSSGLCIKKEDPPDPRVSTVTPASISFLQ 120

Query: 121 DAGAWKYVEQNRHAYFNKMQVWDYTGFGYVRYDARDANKDFLGCVAENKVLHGALLSCMK 180
           +AGAWKYVEQNRHAYF KMQVWDYTGFGY RYDA D NKDFLGCVAENKVLH +LLSC+K
Sbjct: 121 EAGAWKYVEQNRHAYFKKMQVWDYTGFGYARYDAGDVNKDFLGCVAENKVLHSSLLSCIK 180

Query: 181 DSDFKQTIYPLRLTSMTLNTNSMSVVEENTASKDPLSAQG--AKLQLSDGSSIYAKLVVG 238
           DSDFK T YP RLTSMTLNTNSMSVVEENT SK+P  AQG  +KL+LSDGSSIYAKLVVG
Sbjct: 181 DSDFKTTFYPSRLTSMTLNTNSMSVVEENTPSKEPSPAQGHASKLELSDGSSIYAKLVVG 240

Query: 239 ADGGKSRVRDLAGFRTTGWNYSQNAIICTVEHASENQCAWQRFLPTGPIALLPMGDKFSN 298
           ADGGKSRVR+LAGF+TTGWNYSQNAIICTVEH S N CAWQRFLP GPIALLPMG+ FSN
Sbjct: 241 ADGGKSRVRELAGFKTTGWNYSQNAIICTVEHTSANHCAWQRFLPNGPIALLPMGENFSN 300

Query: 299 IVWTMSPAESNNRKSITEEDFLKDVNSALDDGYGPRPTSSLLGTRDVLSWFRNDAALSAN 358
           IVWTMSP ESN+RKSITEE FLKDVNSALD GYGP PTSS LG RD+ SW + D  LSAN
Sbjct: 301 IVWTMSPTESNDRKSITEEMFLKDVNSALDYGYGPHPTSSSLGARDIFSWLKMDGTLSAN 360

Query: 359 EFFEIPPKVVRLASERMVFPLSLRHANSYASKRVVLIGDAAHTVHPLAGQGVNLGFGDAF 418
           E FEIPPK +RLASERMVFPLSLRHANSYA+KRVVLIGDAAHT+HPLAGQGVNLGFGDA+
Sbjct: 361 EPFEIPPKAIRLASERMVFPLSLRHANSYATKRVVLIGDAAHTIHPLAGQGVNLGFGDAY 420

Query: 419 SLSRTIAEGIALGSDIGEVNLLRKYEAERKPANIMMMAVLDGFQKAYSIDFGPFNFLRAA 478
           SLSR IAEGIALGSDIGEVNLL+KYE ERKPAN+ MMA+LDGFQKAYSIDFGPFNFLR A
Sbjct: 421 SLSRVIAEGIALGSDIGEVNLLKKYEQERKPANVTMMAILDGFQKAYSIDFGPFNFLRGA 480

Query: 479 AFQGANYISPLKRSIISYASGDHKLPIFM 507
           AF+GAN++SPLKRSIISYASG+ KLPIF 
Sbjct: 481 AFRGANFVSPLKRSIISYASGERKLPIFF 509


>Medtr2g060550.1 | ubiquinone biosynthesis monooxygenase COQ6-like
           protein | HC | chr2:25696497-25686530 | 20130731
          Length = 509

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/509 (83%), Positives = 456/509 (89%), Gaps = 2/509 (0%)

Query: 1   MNRVLKKTVSNVCALKITRKSFCTEVVKVAGSTTGDPSNEHGKKQSISKSIPEYDIAIVG 60
           MNRV+KKTVSNV ALKI RK FC++ VKV  ST   PSNEH KK  IS+ IPEYD+AIVG
Sbjct: 1   MNRVIKKTVSNVFALKIPRKCFCSQAVKVDASTNLLPSNEHEKKPIISQIIPEYDVAIVG 60

Query: 61  GGMVGMALACFLASMPLTKQLSVAIIDSNPALGSSLCIKKEDPPDPRVSTVTPATISFLR 120
           GGMVGMALACFLA MP+TKQLSVAIIDSNPAL S LCIKKEDPPDPRVSTVTPA+ISFL+
Sbjct: 61  GGMVGMALACFLACMPMTKQLSVAIIDSNPALSSGLCIKKEDPPDPRVSTVTPASISFLQ 120

Query: 121 DAGAWKYVEQNRHAYFNKMQVWDYTGFGYVRYDARDANKDFLGCVAENKVLHGALLSCMK 180
           +AGAWKYVEQNRHAYF KMQVWDYTGFGY RYDA D NKDFLGCVAENKVLH +LLSC+K
Sbjct: 121 EAGAWKYVEQNRHAYFKKMQVWDYTGFGYARYDAGDVNKDFLGCVAENKVLHSSLLSCIK 180

Query: 181 DSDFKQTIYPLRLTSMTLNTNSMSVVEENTASKDPLSAQG--AKLQLSDGSSIYAKLVVG 238
           DSDFK T YP RLTSMTLNTNSMSVVEENT SK+P  AQG  +KL+LSDGSSIYAKLVVG
Sbjct: 181 DSDFKTTFYPSRLTSMTLNTNSMSVVEENTPSKEPSPAQGHASKLELSDGSSIYAKLVVG 240

Query: 239 ADGGKSRVRDLAGFRTTGWNYSQNAIICTVEHASENQCAWQRFLPTGPIALLPMGDKFSN 298
           ADGGKSRVR+LAGF+TTGWNYSQNAIICTVEH S N CAWQRFLP GPIALLPMG+ FSN
Sbjct: 241 ADGGKSRVRELAGFKTTGWNYSQNAIICTVEHTSANHCAWQRFLPNGPIALLPMGENFSN 300

Query: 299 IVWTMSPAESNNRKSITEEDFLKDVNSALDDGYGPRPTSSLLGTRDVLSWFRNDAALSAN 358
           IVWTMSP ESN+RKSITEE FLKDVNSALD GYGP PTSS LG RD+ SW + D  LSAN
Sbjct: 301 IVWTMSPTESNDRKSITEEMFLKDVNSALDYGYGPHPTSSSLGARDIFSWLKMDGTLSAN 360

Query: 359 EFFEIPPKVVRLASERMVFPLSLRHANSYASKRVVLIGDAAHTVHPLAGQGVNLGFGDAF 418
           E FEIPPK +RLASERMVFPLSLRHANSYA+KRVVLIGDAAHT+HPLAGQGVNLGFGDA+
Sbjct: 361 EPFEIPPKAIRLASERMVFPLSLRHANSYATKRVVLIGDAAHTIHPLAGQGVNLGFGDAY 420

Query: 419 SLSRTIAEGIALGSDIGEVNLLRKYEAERKPANIMMMAVLDGFQKAYSIDFGPFNFLRAA 478
           SLSR IAEGIALGSDIGEVNLL+KYE ERKPAN+ MMA+LDGFQKAYSIDFGPFNFLR A
Sbjct: 421 SLSRVIAEGIALGSDIGEVNLLKKYEQERKPANVTMMAILDGFQKAYSIDFGPFNFLRGA 480

Query: 479 AFQGANYISPLKRSIISYASGDHKLPIFM 507
           AF+GAN++SPLKRSIISYASG+ KLPIF 
Sbjct: 481 AFRGANFVSPLKRSIISYASGERKLPIFF 509


>Medtr7g051960.1 | ubiquinone biosynthesis monooxygenase COQ6-like
           protein | HC | chr7:18246384-18240008 | 20130731
          Length = 433

 Score =  777 bits (2007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/433 (84%), Positives = 393/433 (90%), Gaps = 2/433 (0%)

Query: 77  LTKQLSVAIIDSNPALGSSLCIKKEDPPDPRVSTVTPATISFLRDAGAWKYVEQNRHAYF 136
           +TKQLSVAIIDSNPAL S LCIKKEDPPDPRVSTVTPA+ISFL++AGAWKYVEQNRHAYF
Sbjct: 1   MTKQLSVAIIDSNPALSSGLCIKKEDPPDPRVSTVTPASISFLQEAGAWKYVEQNRHAYF 60

Query: 137 NKMQVWDYTGFGYVRYDARDANKDFLGCVAENKVLHGALLSCMKDSDFKQTIYPLRLTSM 196
            KMQVWDYTGFGY RYDA D NKDFLGCVAENKVLH +LLSC+KDSDFK T YP RLTSM
Sbjct: 61  KKMQVWDYTGFGYARYDAGDVNKDFLGCVAENKVLHSSLLSCIKDSDFKTTFYPSRLTSM 120

Query: 197 TLNTNSMSVVEENTASKDPLSAQG--AKLQLSDGSSIYAKLVVGADGGKSRVRDLAGFRT 254
           TLNTNSMSVVEENT SK+P  AQG  +KL+LSDGSSIYAKLVVGADGGKSRVR+LAGF+T
Sbjct: 121 TLNTNSMSVVEENTPSKEPSPAQGHASKLELSDGSSIYAKLVVGADGGKSRVRELAGFKT 180

Query: 255 TGWNYSQNAIICTVEHASENQCAWQRFLPTGPIALLPMGDKFSNIVWTMSPAESNNRKSI 314
           TGWNYSQNAIICTVEH S N CAWQRFLP GPIALLPMG+ FSNIVWTMSP ESN+RKSI
Sbjct: 181 TGWNYSQNAIICTVEHTSANHCAWQRFLPNGPIALLPMGENFSNIVWTMSPTESNDRKSI 240

Query: 315 TEEDFLKDVNSALDDGYGPRPTSSLLGTRDVLSWFRNDAALSANEFFEIPPKVVRLASER 374
           TEE FLKDVNSALD GYGP PTSS LG RD+ SW + D  LSANE FEIPPK +RLASER
Sbjct: 241 TEEMFLKDVNSALDYGYGPHPTSSSLGARDIFSWLKMDGTLSANEPFEIPPKAIRLASER 300

Query: 375 MVFPLSLRHANSYASKRVVLIGDAAHTVHPLAGQGVNLGFGDAFSLSRTIAEGIALGSDI 434
           MVFPLSLRHANSYA+KRVVLIGDAAHT+HPLAGQGVNLGFGDA+SLSR IAEGIALGSDI
Sbjct: 301 MVFPLSLRHANSYATKRVVLIGDAAHTIHPLAGQGVNLGFGDAYSLSRVIAEGIALGSDI 360

Query: 435 GEVNLLRKYEAERKPANIMMMAVLDGFQKAYSIDFGPFNFLRAAAFQGANYISPLKRSII 494
           GEVNLL+KYE ERKPAN+ MMA+LDGFQKAYSIDFGPFNFLR AAF GAN++SPLKRSII
Sbjct: 361 GEVNLLKKYEQERKPANVTMMAILDGFQKAYSIDFGPFNFLRGAAFSGANFVSPLKRSII 420

Query: 495 SYASGDHKLPIFM 507
           SYASG+ KLPIF 
Sbjct: 421 SYASGERKLPIFF 433


>Medtr7g051967.1 | hypothetical protein | HC |
          chr7:18249512-18247966 | 20130731
          Length = 169

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/74 (72%), Positives = 60/74 (81%)

Query: 1  MNRVLKKTVSNVCALKITRKSFCTEVVKVAGSTTGDPSNEHGKKQSISKSIPEYDIAIVG 60
          MNRV+KKTVSNV ALKI RK FC++VVKV  ST   PSN H KK  IS+ IPEYD+AIVG
Sbjct: 1  MNRVIKKTVSNVFALKIPRKCFCSQVVKVDASTNILPSNGHEKKPIISQIIPEYDVAIVG 60

Query: 61 GGMVGMALACFLAS 74
          GGMVGMALACFL +
Sbjct: 61 GGMVGMALACFLGA 74