Miyakogusa Predicted Gene
- Lj0g3v0293899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0293899.1 Non Characterized Hit- tr|I1L4A5|I1L4A5_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,65.62,0.000000000000001, ,CUFF.19674.1
(67 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g083750.1 | kinase superfamily protein, putative | LC | ch... 72 1e-13
Medtr6g083760.1 | receptor-like kinase | LC | chr6:31221513-3122... 71 3e-13
Medtr6g082980.1 | wall-associated receptor kinase galacturonan-b... 69 7e-13
Medtr6g083010.1 | wall-associated receptor kinase galacturonan-b... 64 3e-11
Medtr6g083780.1 | receptor-like kinase | LC | chr6:31210787-3121... 63 8e-11
Medtr6g044830.1 | wall associated kinase-like protein | LC | chr... 59 8e-10
Medtr6g044740.1 | wall-associated kinase-like protein | LC | chr... 58 2e-09
Medtr6g082870.1 | receptor-like kinase | LC | chr6:30958441-3096... 54 4e-08
Medtr8g104520.1 | receptor-like kinase | HC | chr8:44032465-4403... 51 2e-07
>Medtr6g083750.1 | kinase superfamily protein, putative | LC |
chr6:31227797-31228201 | 20130731
Length = 134
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 3 LCLFLLTCNLPQSHSQPAAPPVS-NYSICNELSYNCGN-LTGISYPFWGQNRPSHCGGGD 60
+C FLLT L H QP P + NYS+C E SYN G+ L+ ISYPFWG NRPSHCGGGD
Sbjct: 8 ICFFLLTTLLQTLHCQPHQPQTNLNYSLCREESYNYGDQLSNISYPFWGHNRPSHCGGGD 67
Query: 61 MFNLTC 66
+F L C
Sbjct: 68 LFYLNC 73
>Medtr6g083760.1 | receptor-like kinase | LC |
chr6:31221513-31225018 | 20130731
Length = 624
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 46/70 (65%), Gaps = 9/70 (12%)
Query: 3 LCLFLLTC--NLP-QSHSQPAAPPVSNYSICNEL--SYNCGNLTGISYPFWGQNRPSHCG 57
LC FLL + P QSHSQP V +YS CN + SYNCGN++ I YPFWGQNRP CG
Sbjct: 11 LCFFLLIIITSFPTQSHSQP----VHDYSSCNYVDHSYNCGNISNIIYPFWGQNRPYRCG 66
Query: 58 GGDMFNLTCH 67
G+ F L CH
Sbjct: 67 AGNPFYLNCH 76
>Medtr6g082980.1 | wall-associated receptor kinase
galacturonan-binding protein | LC |
chr6:31001682-31002503 | 20130731
Length = 261
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 6/65 (9%)
Query: 5 LFLLTCNLPQSHSQPAAPPVSNYSICNEL--SYNCGNLTGISYPFWGQNRPSHCGGGDMF 62
+ ++T LP + + + +YS C ++ SYNCGNLT ISYPFWG+NRPSHCG G F
Sbjct: 19 VIIITILLPHT----SQLVIDDYSTCRDIKNSYNCGNLTNISYPFWGKNRPSHCGAGHHF 74
Query: 63 NLTCH 67
L CH
Sbjct: 75 YLNCH 79
>Medtr6g083010.1 | wall-associated receptor kinase
galacturonan-binding protein | LC |
chr6:31012211-31014135 | 20130731
Length = 289
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 6/69 (8%)
Query: 3 LCLFLLTCNLP-QSHSQPAAPPVSNYSICNEL--SYNCGNL-TGISYPFWGQNRPSHCGG 58
L + ++ P QSHSQP P ++YS C ++ SY+CG++ + ISYPFWG+NRP HCG
Sbjct: 18 LVIIIIATFFPLQSHSQP--PSFNDYSTCKDIKNSYSCGSIISNISYPFWGENRPFHCGA 75
Query: 59 GDMFNLTCH 67
G+ ++L CH
Sbjct: 76 GNPYHLYCH 84
>Medtr6g083780.1 | receptor-like kinase | LC |
chr6:31210787-31214746 | 20130731
Length = 652
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 24 VSNYSICNE--LSYNCGNLTGISYPFWGQNRPSHCGGGDMFNLTCH 67
V+NYS C +YNCGNL+ I YPFWGQNRPS+CG G F L CH
Sbjct: 39 VNNYSNCQNTNYTYNCGNLSNIYYPFWGQNRPSYCGAGKHFYLNCH 84
>Medtr6g044830.1 | wall associated kinase-like protein | LC |
chr6:15523578-15519734 | 20130731
Length = 635
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 34 SYNCGNLTGISYPFWGQNRPSHCGGGDMFNLTCH 67
SYNCGN++ ISYPFWGQNRP CG G+ F L CH
Sbjct: 3 SYNCGNISNISYPFWGQNRPFQCGAGNPFYLNCH 36
>Medtr6g044740.1 | wall-associated kinase-like protein | LC |
chr6:15492889-15496301 | 20130731
Length = 652
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 3 LCLFLLTCNLPQSHSQPAAPPVSNYSICNEL--SYNCGNLTGISYPFWGQNRPSHCGGGD 60
+ F+L S+SQ NYS C ++ SYNCGN++ ISYPFWGQ+RP +CG +
Sbjct: 33 ISFFILVTT---SNSQQPPQSFYNYSSCKDIKNSYNCGNISNISYPFWGQSRPLYCGARN 89
Query: 61 MFNLTC 66
F L C
Sbjct: 90 PFYLNC 95
>Medtr6g082870.1 | receptor-like kinase | LC |
chr6:30958441-30961513 | 20130731
Length = 661
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 26 NYSICNELS--YNCGNLTGISYPFWGQNRPSHCGGGDMFNLTC 66
NY C ++ YNCG +T ISYPFWGQNR S CG G F L C
Sbjct: 43 NYRSCRDIKNFYNCGRITNISYPFWGQNRLSPCGAGKPFYLNC 85
>Medtr8g104520.1 | receptor-like kinase | HC |
chr8:44032465-44036466 | 20130731
Length = 656
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 12 LPQSHSQPAAPPVSNYSICNELSYNCGNLTGISYPFWGQNRPSHCGGGDMFNLTC 66
LP S+SQ +S CNE + CG T +S+PFWG+NRP+ CG + F LTC
Sbjct: 18 LPLSNSQKN----DTFSTCNESYFTCGTNTNVSFPFWGKNRPNICGKNE-FKLTC 67