Miyakogusa Predicted Gene

Lj0g3v0293439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0293439.1 Non Characterized Hit- tr|G7KT72|G7KT72_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,45.45,8e-19,seg,NULL,CUFF.19640.1
         (170 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g069930.1 | hypothetical protein | HC | chr7:25781437-2578...    56   1e-08

>Medtr7g069930.1 | hypothetical protein | HC |
           chr7:25781437-25782731 | 20130731
          Length = 183

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 71/164 (43%), Gaps = 25/164 (15%)

Query: 1   MEDGVTEVQSFLPPQNVDSEDGSKREEKNDEKEEGFVPEAEKSVEEDLGTEHSGKNFAAK 60
           MEDGV E  +  PP N +S+D SKR  K+ +++EG V               + K+   K
Sbjct: 1   MEDGVIETPNMFPPMNQNSQDESKR--KDAKEKEGLV--------------STEKDEKMK 44

Query: 61  DEAKNSDSXXXXXXXLINNLISSFITPSSPR----TXXXXXXXXXXXXXXXXXXXXXXXX 116
            E +           +I+NLIS+FITPSSPR    T                        
Sbjct: 45  QEEEEEAKESSGGGGVISNLISTFITPSSPRNEKVTAQDESGNEVLEKKEEVDQDGGEKG 104

Query: 117 IISNLVSNFFHRXXXXXXXXXXXXXXXXXXILVDGKIKRQKTQD 160
           +ISNLVSNFFH+                  I VD KIKR KT++
Sbjct: 105 LISNLVSNFFHK-----RECEGVVEKEDEEIKVDEKIKRLKTEN 143