Miyakogusa Predicted Gene

Lj0g3v0292789.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0292789.2 Non Characterized Hit- tr|I0Z677|I0Z677_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,30.3,6e-17,UNCHARACTERIZED,NULL; PX SERINE/THREONINE KINASE
(PXK),NULL; Nexin_C,Sorting nexin, C-terminal; seg,,CUFF.19584.2
         (332 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0147s0080.1 | sorting nexin carboxy-terminal protein | HC |...   413   e-115
Medtr0147s0080.2 | sorting nexin carboxy-terminal protein | HC |...   302   3e-82
Medtr1g034190.1 | sorting nexin carboxy-terminal protein | HC | ...   135   7e-32
Medtr4g087210.1 | sorting nexin carboxy-terminal protein | HC | ...   126   2e-29

>Medtr0147s0080.1 | sorting nexin carboxy-terminal protein | HC |
            scaffold0147:38059-27596 | 20130731
          Length = 1117

 Score =  413 bits (1061), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 220/336 (65%), Positives = 246/336 (73%), Gaps = 22/336 (6%)

Query: 1    MQLPTISESIEVWDFLSVDSQTYIFSSSFSIMETLSVGLHAKPSEKTKSSSHLSLPGSDP 60
            MQLPT+SESIE+WDFLSVDSQTYIFS+SFSIMETL VGL AK SEKTK SS++S PGSDP
Sbjct: 768  MQLPTVSESIELWDFLSVDSQTYIFSNSFSIMETLPVGLDAKSSEKTKISSNVSAPGSDP 827

Query: 61   SAFRRENYSLESKEAVVRTRNNVVTDGLKPKVNSMPLSLP-KRSGLESRKSPDNSGSNTD 119
                            +R RNNVV +GL PKVNS PLS P K++  ESR+S  NSGS  D
Sbjct: 828  ---------------FLRRRNNVVANGLGPKVNSTPLSPPAKKNTQESRQSFGNSGSTAD 872

Query: 120  FLARKNAPS-PNNLHKTVRGRDSSDEVAEAHHDTSDSIPTEWVPPNLSAPXXXXXXXXXX 178
             LA K+APS PNNL K+V+GRDSSDEV+  HH+T+D++PTEWVPPNLSAP          
Sbjct: 873  SLAWKSAPSSPNNLQKSVKGRDSSDEVSNVHHNTADTLPTEWVPPNLSAPILDLVDVIFQ 932

Query: 179  XXXGGWIRRKAFWAAKQILQLGMGDAFDDWLIEKVQLLRKGSVIASGVKRVEQILWPDGI 238
               GGWIRR+AFW AKQ+LQLGMGDAFDDWL+EK+ LLRKGSVIASGV RVEQILWPDGI
Sbjct: 933  LQDGGWIRRQAFWVAKQVLQLGMGDAFDDWLLEKILLLRKGSVIASGVTRVEQILWPDGI 992

Query: 239  FLTKHXXXXXXXXXXXXXXXX--XXXXTQVSSPTMSDEQKQEADRRAKFVYELMIENAPP 296
            FLTKH                      T VSSP M DE KQEADRRAKFVYELMI+ APP
Sbjct: 993  FLTKHPNRRPPPTPTSLSQNSPNGNQPTPVSSPRMDDE-KQEADRRAKFVYELMIDQAPP 1051

Query: 297  AIVSLVGRKEYEQCARDLYFFLQVISVFLVVLISFD 332
             IVSLVGRKEYEQCARDLYFFLQ  S   +  ++FD
Sbjct: 1052 TIVSLVGRKEYEQCARDLYFFLQ--SSVCLKQLAFD 1085


>Medtr0147s0080.2 | sorting nexin carboxy-terminal protein | HC |
           scaffold0147:38059-30941 | 20130731
          Length = 1001

 Score =  302 bits (774), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 158/243 (65%), Positives = 182/243 (74%), Gaps = 17/243 (6%)

Query: 1   MQLPTISESIEVWDFLSVDSQTYIFSSSFSIMETLSVGLHAKPSEKTKSSSHLSLPGSDP 60
           MQLPT+SESIE+WDFLSVDSQTYIFS+SFSIMETL VGL AK SEKTK SS++S PGSDP
Sbjct: 768 MQLPTVSESIELWDFLSVDSQTYIFSNSFSIMETLPVGLDAKSSEKTKISSNVSAPGSDP 827

Query: 61  SAFRRENYSLESKEAVVRTRNNVVTDGLKPKVNSMPLSLP-KRSGLESRKSPDNSGSNTD 119
                           +R RNNVV +GL PKVNS PLS P K++  ESR+S  NSGS  D
Sbjct: 828 ---------------FLRRRNNVVANGLGPKVNSTPLSPPAKKNTQESRQSFGNSGSTAD 872

Query: 120 FLARKNAPS-PNNLHKTVRGRDSSDEVAEAHHDTSDSIPTEWVPPNLSAPXXXXXXXXXX 178
            LA K+APS PNNL K+V+GRDSSDEV+  HH+T+D++PTEWVPPNLSAP          
Sbjct: 873 SLAWKSAPSSPNNLQKSVKGRDSSDEVSNVHHNTADTLPTEWVPPNLSAPILDLVDVIFQ 932

Query: 179 XXXGGWIRRKAFWAAKQILQLGMGDAFDDWLIEKVQLLRKGSVIASGVKRVEQILWPDGI 238
              GGWIRR+AFW AKQ+LQLGMGDAFDDWL+EK+ LLRKGSVIASGV RVEQ++     
Sbjct: 933 LQDGGWIRRQAFWVAKQVLQLGMGDAFDDWLLEKILLLRKGSVIASGVTRVEQVILRSVF 992

Query: 239 FLT 241
           FL 
Sbjct: 993 FLN 995


>Medtr1g034190.1 | sorting nexin carboxy-terminal protein | HC |
           chr1:12405519-12415983 | 20130731
          Length = 996

 Score =  135 bits (339), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 159/360 (44%), Gaps = 45/360 (12%)

Query: 1   MQLPTISESIEVWDFLSVDSQTYIFSSSFSIMETLSVGLHAKPSE------------KTK 48
           + +  ++E  EVWDFLS  S+ Y F    S+M TL+V +     +            K K
Sbjct: 600 LSIANVAEQHEVWDFLSSSSKNYSFGKPSSMMRTLAVNVDDAVDDIVRQFKGVSDDLKRK 659

Query: 49  SSSHLSLPGSDPSA---------FRRENYSLESKEAVVRTRNNVVTDGLKPKVNSMPLSL 99
             +  S P ++ S+           R N S  + E+ + +     T+  + + N    S+
Sbjct: 660 VGTASSSPTAEGSSKSFTWNMDEMDRSNPSKNAAESALSSD----TEEGEKEGNYSHESI 715

Query: 100 PKRSGLESRKSPDNSGSNTDF----LARKNAPSPNNL---HKTV----RGRDSSDEVAEA 148
            +    +S    DN  S+ D+    L   N  S  +L   H  V     G+D        
Sbjct: 716 AREVAEDSLCLNDNELSSKDYSQGVLNHGNEFSNLDLDRKHDVVIEAKVGKDVPATNGSL 775

Query: 149 HHDTSD---SIPTEWVPPNLSAPXXXXXXXXXXXXXGGWIRRKAFWAAKQILQLGMGDAF 205
            HD  +    +P EW PPN++ P              GW+RR+ FW +KQILQL M DA 
Sbjct: 776 SHDNPEDPIGVPPEWTPPNVTVPILNLVDNVFQLNKRGWLRRQVFWISKQILQLVMEDAI 835

Query: 206 DDWLIEKVQLLRKGSVIASGVKRVEQILWPDGIFLTK------HXXXXXXXXXXXXXXXX 259
           DD L+ ++  LR+   IA G++ V+ ILWP G F  +                       
Sbjct: 836 DDILLSEIHWLRREETIAQGIRWVQDILWPGGTFFLRIQTPQVFIGGGVTDQKPLQTISE 895

Query: 260 XXXXTQVSSPTMSDEQKQEADRRAKFVYELMIENAPPAIVSLVGRKEYEQCARDLYFFLQ 319
               T   S     E++ EA RRA  V +L+ + AP A+VSLVG+K+Y +CA D+YFF Q
Sbjct: 896 SGERTSQKSQLWCFEEQLEAARRASDVKKLLFDGAPAALVSLVGQKQYRRCASDIYFFSQ 955


>Medtr4g087210.1 | sorting nexin carboxy-terminal protein | HC |
           chr4:34163977-34175592 | 20130731
          Length = 1039

 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 156 IPTEWVPPNLSAPXXXXXXXXXXXXXGGWIRRKAFWAAKQILQLGMGDAFDDWLIEKVQL 215
           +P EW PPN+S P              GWIRR+ FW +KQILQL M DA DDWL+ ++  
Sbjct: 831 VPPEWSPPNVSVPLLNLVDKIFQLKKRGWIRRQVFWMSKQILQLVMEDAIDDWLLMQIHW 890

Query: 216 LRKGSVIASGVKRVEQILWPDGIFLTKHXXXXXXXXXXXXXXXXXXXXTQVSSPTMSD-- 273
           LRK   +A G++ ++ +LWP G+F T+                     +   + T  +  
Sbjct: 891 LRKEDTVAQGIRWLQDVLWPGGMFFTRVRLPQITNGGSDEKPSQTISGSGGRNITKHESG 950

Query: 274 --EQKQEADRRAKFVYELMIENAPPAIVSLVGRKEYEQCARDLYFFLQ 319
             E++ EA RR   + +L+ + AP  +VSL+G  +Y +CARD+Y+F Q
Sbjct: 951 SFEEQLEAARRESDIKKLLFDGAPTTLVSLIGHNQYRRCARDIYYFSQ 998