Miyakogusa Predicted Gene
- Lj0g3v0292789.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0292789.1 Non Characterized Hit- tr|G7JJE3|G7JJE3_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,74.56,0,seg,NULL; Domain associated with PX
domains,PX-associated, sorting nexin 13; PXA,Phox-associated
dom,CUFF.19584.1
(696 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g012875.1 | phox (PX) domain protein | HC | chr4:3458794-3... 1008 0.0
Medtr0147s0080.2 | sorting nexin carboxy-terminal protein | HC |... 1007 0.0
Medtr0147s0080.1 | sorting nexin carboxy-terminal protein | HC |... 1006 0.0
Medtr4g087210.1 | sorting nexin carboxy-terminal protein | HC | ... 231 1e-60
Medtr1g034190.1 | sorting nexin carboxy-terminal protein | HC | ... 178 1e-44
>Medtr4g012875.1 | phox (PX) domain protein | HC |
chr4:3458794-3452760 | 20130731
Length = 774
Score = 1008 bits (2607), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/687 (72%), Positives = 544/687 (79%), Gaps = 4/687 (0%)
Query: 1 MSMPRPSQVTVRDLAEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLIIAFRYL 60
MSMP+P+QV VRDL EEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLII FRYL
Sbjct: 1 MSMPKPNQVAVRDLVEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLIIVFRYL 60
Query: 61 SLDFEMKRKAAAYNNKAGFTSAQSSKIPIENAKAVTKFDWRKKVNSPVVEDAIDHFTRHL 120
SLD+EMKRKAAAYNNK+G TS QSSK P ENAKAV KF WR KVNSPVVEDAIDHFTRHL
Sbjct: 61 SLDYEMKRKAAAYNNKSGSTSNQSSKKPTENAKAVAKFQWRAKVNSPVVEDAIDHFTRHL 120
Query: 121 ISEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLIHLICTHLE 180
ISEWVTDLWYSRLTPDKE PEELVQ+INGVLGEISGRMRNINLIDFLIRDL++LIC HL+
Sbjct: 121 ISEWVTDLWYSRLTPDKEAPEELVQMINGVLGEISGRMRNINLIDFLIRDLVNLICAHLD 180
Query: 181 LFRAALSKIEKQGTGSLTFESRDMELKVTLAAENKLHPALFSTEAEHKVLQHLMSGLMFV 240
LFRAA++KIEKQ T SLT ESRD E+K+ LAAE+KLHPALFS+EAEHKVLQHLM+GL+ V
Sbjct: 181 LFRAAITKIEKQHTDSLTIESRDTEIKIVLAAEDKLHPALFSSEAEHKVLQHLMNGLISV 240
Query: 241 TFKSEDLHCSFFRYAVRELLACAVIRPVLNLANPRFINERIEXXXXXXXXXXXXXXXAQE 300
TFKSEDL CSFFRY VRELLAC V+RPVLNLANPRFINERIE AQE
Sbjct: 241 TFKSEDLQCSFFRYTVRELLACCVMRPVLNLANPRFINERIEAVVINKTKANKEVDAAQE 300
Query: 301 GSHAKVDELQTSSDHFSKCLDPSATGVELVQLRNGQSKNAVSSTENKSRDNIAKDPLLSI 360
SH K DELQTSSDHFS+CLDPS TGVEL QL+NGQS+NA S E DN+++DPLLSI
Sbjct: 301 VSHTKADELQTSSDHFSQCLDPSVTGVELTQLKNGQSRNAKPSAERNVSDNLSRDPLLSI 360
Query: 361 DARSSRSWNSLPANSEPNDDQGIQRYRSGGEWGDILDVISRRKTQALAPEHFENVWTKGK 420
D RSSRSWN+LP NS+ N DQG QR+ SGGEWGDILDV+SRRKTQ LAPEHFENVW KGK
Sbjct: 361 DTRSSRSWNTLPGNSQSNGDQGTQRHHSGGEWGDILDVVSRRKTQTLAPEHFENVWAKGK 420
Query: 421 NYKKKDGENQSNEQVPQHPAIGKSLKVDHMKSISGPKEKETNSKFNPK--GHINSGYNSP 478
NY+KKDGENQSNE+ PQHP +GKS KVDHMK+IS PKEK+T S NP GHINSGY+S
Sbjct: 421 NYQKKDGENQSNERAPQHPPMGKSPKVDHMKAISAPKEKDTRSNLNPSKGGHINSGYSSQ 480
Query: 479 ITAKNAPFHADKNGSTCSSVTSYKDDENNHIYMQXXXXXXXXXXXXXXXXXNTVTGLDSP 538
T +NA F+A+KNGSTCSSVTS KDDE+NHI +TVTGLDSP
Sbjct: 481 FTVENASFYANKNGSTCSSVTSSKDDEHNHINRHMSESESNTSYTSEDDETSTVTGLDSP 540
Query: 539 VTKVWDGRSNRNQAVSYVHHPLENVDNHGRKKRNKSHSRNPRLSRTQSGSKRSRFGGNKL 598
TKVWDGRS RNQAVSYVHHPLEN DNH KKRNK+ SR P+L RTQSGSKRSR K
Sbjct: 541 GTKVWDGRSIRNQAVSYVHHPLENFDNHSPKKRNKNRSRYPKLFRTQSGSKRSRSSDIKT 600
Query: 599 PTWQEVERTSFVSGDGQDILSTSKSQVNXXXXXXXXXXXXLGRIYXXXXXXXXXXXXXXX 658
WQEVER+SF+SGDGQD+LS+SKS +N GRIY
Sbjct: 601 HMWQEVERSSFLSGDGQDVLSSSKSHLNSDESSDDADFERSGRIY--SGAAASSSSISKS 658
Query: 659 XXXXXXVNPLKSSSAVDSFYKLKCEVL 685
NPL+ SSAVDSFYKL+CEVL
Sbjct: 659 ESGSLAANPLRGSSAVDSFYKLRCEVL 685
>Medtr0147s0080.2 | sorting nexin carboxy-terminal protein | HC |
scaffold0147:38059-30941 | 20130731
Length = 1001
Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/687 (72%), Positives = 544/687 (79%), Gaps = 4/687 (0%)
Query: 1 MSMPRPSQVTVRDLAEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLIIAFRYL 60
MSMP+P+QV VRDL EEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLII FRYL
Sbjct: 1 MSMPKPNQVAVRDLVEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLIIVFRYL 60
Query: 61 SLDFEMKRKAAAYNNKAGFTSAQSSKIPIENAKAVTKFDWRKKVNSPVVEDAIDHFTRHL 120
SLD+EMKRKAAAYNNK+G TS QSSK P ENAKAV KF WR KVNSPVVEDAIDHFTRHL
Sbjct: 61 SLDYEMKRKAAAYNNKSGSTSNQSSKKPTENAKAVAKFQWRAKVNSPVVEDAIDHFTRHL 120
Query: 121 ISEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLIHLICTHLE 180
ISEWVTDLWYSRLTPDKE PEELVQ+INGVLGEISGRMRNINLIDFLIRDL++LIC HL+
Sbjct: 121 ISEWVTDLWYSRLTPDKEAPEELVQMINGVLGEISGRMRNINLIDFLIRDLVNLICAHLD 180
Query: 181 LFRAALSKIEKQGTGSLTFESRDMELKVTLAAENKLHPALFSTEAEHKVLQHLMSGLMFV 240
LFRAA++KIEKQ T SLT ESRD E+K+ LAAE+KLHPALFS+EAEHKVLQHLM+GL+ V
Sbjct: 181 LFRAAITKIEKQHTDSLTIESRDTEIKIVLAAEDKLHPALFSSEAEHKVLQHLMNGLISV 240
Query: 241 TFKSEDLHCSFFRYAVRELLACAVIRPVLNLANPRFINERIEXXXXXXXXXXXXXXXAQE 300
TFKSEDL CSFFRY VRELLAC V+RPVLNLANPRFINERIE AQE
Sbjct: 241 TFKSEDLQCSFFRYTVRELLACCVMRPVLNLANPRFINERIEAVVINKTKANKEVDAAQE 300
Query: 301 GSHAKVDELQTSSDHFSKCLDPSATGVELVQLRNGQSKNAVSSTENKSRDNIAKDPLLSI 360
SH K DELQTSSDHFS+CLDPS TGVEL QL+NGQS+NA S E DN+++DPLLSI
Sbjct: 301 VSHTKADELQTSSDHFSQCLDPSVTGVELTQLKNGQSRNAKPSAERNVSDNLSRDPLLSI 360
Query: 361 DARSSRSWNSLPANSEPNDDQGIQRYRSGGEWGDILDVISRRKTQALAPEHFENVWTKGK 420
D RSSRSWN+LP NS+ N DQG QR+ SGGEWGDILDV+SRRKTQ LAPEHFENVW KGK
Sbjct: 361 DTRSSRSWNTLPGNSQSNGDQGTQRHHSGGEWGDILDVVSRRKTQTLAPEHFENVWAKGK 420
Query: 421 NYKKKDGENQSNEQVPQHPAIGKSLKVDHMKSISGPKEKETNSKFNPK--GHINSGYNSP 478
NY+KKDGENQSNE+ PQHP +GKS KVDHMK+IS PKEK+T S NP GHINSGY+S
Sbjct: 421 NYQKKDGENQSNERAPQHPPMGKSPKVDHMKAISAPKEKDTRSNLNPSKGGHINSGYSSQ 480
Query: 479 ITAKNAPFHADKNGSTCSSVTSYKDDENNHIYMQXXXXXXXXXXXXXXXXXNTVTGLDSP 538
T +NA F+A+KNGSTCSSVTS KDDE+NHI +TVTGLDSP
Sbjct: 481 FTVENASFYANKNGSTCSSVTSSKDDEHNHINRHMSESESNTSYTSEDDETSTVTGLDSP 540
Query: 539 VTKVWDGRSNRNQAVSYVHHPLENVDNHGRKKRNKSHSRNPRLSRTQSGSKRSRFGGNKL 598
TKVWDGRS RNQAVSYVHHPLEN DNH KKRNK+ SR P+L RTQSGSKRSR K
Sbjct: 541 GTKVWDGRSIRNQAVSYVHHPLENFDNHSPKKRNKNRSRYPKLFRTQSGSKRSRSSDIKT 600
Query: 599 PTWQEVERTSFVSGDGQDILSTSKSQVNXXXXXXXXXXXXLGRIYXXXXXXXXXXXXXXX 658
WQEVER+SF+SGDGQD+LS+SKS +N GRIY
Sbjct: 601 HMWQEVERSSFLSGDGQDVLSSSKSHLNSDESSDDADFERSGRIY--SGAAASSSSISKS 658
Query: 659 XXXXXXVNPLKSSSAVDSFYKLKCEVL 685
NPL+ SSAVDSFYKL+CEVL
Sbjct: 659 ESGSLAANPLRGSSAVDSFYKLRCEVL 685
>Medtr0147s0080.1 | sorting nexin carboxy-terminal protein | HC |
scaffold0147:38059-27596 | 20130731
Length = 1117
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/687 (72%), Positives = 544/687 (79%), Gaps = 4/687 (0%)
Query: 1 MSMPRPSQVTVRDLAEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLIIAFRYL 60
MSMP+P+QV VRDL EEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLII FRYL
Sbjct: 1 MSMPKPNQVAVRDLVEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLIIVFRYL 60
Query: 61 SLDFEMKRKAAAYNNKAGFTSAQSSKIPIENAKAVTKFDWRKKVNSPVVEDAIDHFTRHL 120
SLD+EMKRKAAAYNNK+G TS QSSK P ENAKAV KF WR KVNSPVVEDAIDHFTRHL
Sbjct: 61 SLDYEMKRKAAAYNNKSGSTSNQSSKKPTENAKAVAKFQWRAKVNSPVVEDAIDHFTRHL 120
Query: 121 ISEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLIHLICTHLE 180
ISEWVTDLWYSRLTPDKE PEELVQ+INGVLGEISGRMRNINLIDFLIRDL++LIC HL+
Sbjct: 121 ISEWVTDLWYSRLTPDKEAPEELVQMINGVLGEISGRMRNINLIDFLIRDLVNLICAHLD 180
Query: 181 LFRAALSKIEKQGTGSLTFESRDMELKVTLAAENKLHPALFSTEAEHKVLQHLMSGLMFV 240
LFRAA++KIEKQ T SLT ESRD E+K+ LAAE+KLHPALFS+EAEHKVLQHLM+GL+ V
Sbjct: 181 LFRAAITKIEKQHTDSLTIESRDTEIKIVLAAEDKLHPALFSSEAEHKVLQHLMNGLISV 240
Query: 241 TFKSEDLHCSFFRYAVRELLACAVIRPVLNLANPRFINERIEXXXXXXXXXXXXXXXAQE 300
TFKSEDL CSFFRY VRELLAC V+RPVLNLANPRFINERIE AQE
Sbjct: 241 TFKSEDLQCSFFRYTVRELLACCVMRPVLNLANPRFINERIEAVVINKTKANKEVDAAQE 300
Query: 301 GSHAKVDELQTSSDHFSKCLDPSATGVELVQLRNGQSKNAVSSTENKSRDNIAKDPLLSI 360
SH K DELQTSSDHFS+CLDPS TGVEL QL+NGQS+NA S E DN+++DPLLSI
Sbjct: 301 VSHTKADELQTSSDHFSQCLDPSVTGVELTQLKNGQSRNAKPSAERNVSDNLSRDPLLSI 360
Query: 361 DARSSRSWNSLPANSEPNDDQGIQRYRSGGEWGDILDVISRRKTQALAPEHFENVWTKGK 420
D RSSRSWN+LP NS+ N DQG QR+ SGGEWGDILDV+SRRKTQ LAPEHFENVW KGK
Sbjct: 361 DTRSSRSWNTLPGNSQSNGDQGTQRHHSGGEWGDILDVVSRRKTQTLAPEHFENVWAKGK 420
Query: 421 NYKKKDGENQSNEQVPQHPAIGKSLKVDHMKSISGPKEKETNSKFNPK--GHINSGYNSP 478
NY+KKDGENQSNE+ PQHP +GKS KVDHMK+IS PKEK+T S NP GHINSGY+S
Sbjct: 421 NYQKKDGENQSNERAPQHPPMGKSPKVDHMKAISAPKEKDTRSNLNPSKGGHINSGYSSQ 480
Query: 479 ITAKNAPFHADKNGSTCSSVTSYKDDENNHIYMQXXXXXXXXXXXXXXXXXNTVTGLDSP 538
T +NA F+A+KNGSTCSSVTS KDDE+NHI +TVTGLDSP
Sbjct: 481 FTVENASFYANKNGSTCSSVTSSKDDEHNHINRHMSESESNTSYTSEDDETSTVTGLDSP 540
Query: 539 VTKVWDGRSNRNQAVSYVHHPLENVDNHGRKKRNKSHSRNPRLSRTQSGSKRSRFGGNKL 598
TKVWDGRS RNQAVSYVHHPLEN DNH KKRNK+ SR P+L RTQSGSKRSR K
Sbjct: 541 GTKVWDGRSIRNQAVSYVHHPLENFDNHSPKKRNKNRSRYPKLFRTQSGSKRSRSSDIKT 600
Query: 599 PTWQEVERTSFVSGDGQDILSTSKSQVNXXXXXXXXXXXXLGRIYXXXXXXXXXXXXXXX 658
WQEVER+SF+SGDGQD+LS+SKS +N GRIY
Sbjct: 601 HMWQEVERSSFLSGDGQDVLSSSKSHLNSDESSDDADFERSGRIY--SGAAASSSSISKS 658
Query: 659 XXXXXXVNPLKSSSAVDSFYKLKCEVL 685
NPL+ SSAVDSFYKL+CEVL
Sbjct: 659 ESGSLAANPLRGSSAVDSFYKLRCEVL 685
>Medtr4g087210.1 | sorting nexin carboxy-terminal protein | HC |
chr4:34163977-34175592 | 20130731
Length = 1039
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 218/446 (48%), Gaps = 61/446 (13%)
Query: 3 MPRPSQVTVRDLAEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLIIAFRYLSL 62
M + +V DL +E K R + + + +SY ++ TS S+W+N+P + + A R +
Sbjct: 1 MKKKPMESVNDLIQEFKLRTLWWALSIFAVSYFLTHTSKSMWMNVPMSILFVCALRIIVN 60
Query: 63 DFEMKRKAAAYNNKAGFTSAQSSKIPIENAKAVT---KFDWRKKVNSPVVEDAIDHFTRH 119
+ E + K + + + ++ + + + + W++K++SPVVEDA+ F
Sbjct: 61 NVEFRWKVKQPRSHTYLSHLEKKQLSLNDPRLSSVPPPVKWKRKIDSPVVEDAMADFIDK 120
Query: 120 LISEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLIHLICTHL 179
++ ++V DLWYS +TPD+E P+++ II VL EIS R++ INL+D L RDL+ L+ HL
Sbjct: 121 ILKDFVVDLWYSEITPDREFPDQIRAIIMDVLAEISARVKEINLVDLLTRDLVDLVGDHL 180
Query: 180 ELFRAALSKIEKQGTGSLTFESRDMELKVTLAAENKLHPALFSTEAEHKVLQHLMSGLMF 239
ELFR + I +L+ E RD LK L +LHPAL S E+E+KVLQ LMS L+
Sbjct: 181 ELFRRNQAAIGVDVMKTLSTEERDDRLKFHLLNSKELHPALRSPESEYKVLQRLMSALLA 240
Query: 240 VTFKSEDLHCSFFRYAVRELLACAVIRPVLNLANPRFINERIEXXXXXXXXXXXXX---- 295
+ + C R RELL C V++PV+NLA+P FINE IE
Sbjct: 241 TVLRQREAQCPVIRSISRELLTCLVMQPVMNLASPGFINELIETLLLLLNDNDSKKWMGG 300
Query: 296 -------------XXAQEGSHAKVDELQTSSDHFSKCLDPSATGVELVQLRNGQSKNAVS 342
A G H D L SS H P G E+ + S +
Sbjct: 301 DQSTNVASHHHGNSVANSGGH---DNLTASSKH-----PPLYQGTEMTLAK--MSDRGET 350
Query: 343 STENKSRDNIAKDPLLSIDARSSRSWNSLPANSEPNDDQGIQRYRSGGEWGDILDVISRR 402
S +N S + P +P D W +L+V ++R
Sbjct: 351 SLQNNSVHQKSSQP-------------------KPAD------------WAQMLEVATQR 379
Query: 403 KTQALAPEHFENVWTKGKNYKKKDGE 428
+T+ L PE+ EN+W KG+NYK+K+ +
Sbjct: 380 RTEILMPENLENMWAKGRNYKRKENK 405
>Medtr1g034190.1 | sorting nexin carboxy-terminal protein | HC |
chr1:12405519-12415983 | 20130731
Length = 996
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 153/272 (56%), Gaps = 3/272 (1%)
Query: 10 TVRDLAEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLIIAFRYLSLDFEMKRK 69
T+ DL EEAK R + +C+ +SY ++ TS S+W+N+P + + L E + K
Sbjct: 15 TIFDLIEEAKLRFLWWSLCIFAISYFLTHTSKSMWMNIPMSILFFTGLKILVNKVEFRWK 74
Query: 70 AAAYNNKAGFTSAQSSKIPIENAKAVTKFDWRKK---VNSPVVEDAIDHFTRHLISEWVT 126
+ + + ++P++ T K ++SPVVE A++ F ++ ++V
Sbjct: 75 VQPPRLQTYLSHLEKKQLPLDEEHPSTSPPPPKWKKKIDSPVVEAALNDFIDLILKDFVI 134
Query: 127 DLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLIHLICTHLELFRAAL 186
++WY+ +T D E PE++ +I L E+S R++ IN++D L ++ LI H++LFR
Sbjct: 135 NMWYADITQDGEFPEQIRDLIMDALAEVSVRVKEINIVDLLTGGIVDLISDHIDLFRRNQ 194
Query: 187 SKIEKQGTGSLTFESRDMELKVTLAAENKLHPALFSTEAEHKVLQHLMSGLMFVTFKSED 246
+ I + +L+ E RD LK L +LHPAL S E+E+KVLQ LMSG++ + E+
Sbjct: 195 AAIGRDVMLTLSSEERDERLKFHLLNSKELHPALISPESEYKVLQRLMSGVLATVLRKEE 254
Query: 247 LHCSFFRYAVRELLACAVIRPVLNLANPRFIN 278
S R RE+L C +++P++NLA P +IN
Sbjct: 255 AQVSVVRSIAREILTCLILQPIMNLACPAYIN 286