Miyakogusa Predicted Gene

Lj0g3v0292459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0292459.1 Non Characterized Hit- tr|F6HR57|F6HR57_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,89.83,0,coiled-coil,NULL; TRANSCRIPTION FACTOR DP,Transcription
factor DP; E2F_TDP,Transcription factor E2F/,CUFF.19555.1
         (118 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g077803.1 | transcription factor DP, E2 dimerization partn...   229   5e-61
Medtr4g077797.1 | transcription factor DP, E2 dimerization partn...   227   2e-60

>Medtr4g077803.1 | transcription factor DP, E2 dimerization partner
           protein | HC | chr4:29870682-29874859 | 20130731
          Length = 344

 Score =  229 bits (583), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 107/118 (90%), Positives = 115/118 (97%)

Query: 1   MKVCEKVESKGRTTYNEVADELVAEFADPSNSTLSPDQQQYDEKNIRRRVYDALNVLMAM 60
           MKVCEKVESKGRTTYNEVADELVAEFADP NS L+PD+QQYDEKNIRRRVYDALNVLMAM
Sbjct: 102 MKVCEKVESKGRTTYNEVADELVAEFADPINSVLTPDKQQYDEKNIRRRVYDALNVLMAM 161

Query: 61  DIISKDKKEIQWKGLPRTSLNDIEELKTERLGLRNRIEKKRAYLQELEDQYIGLQNLI 118
           DIISKDKKEIQWKGLPRTSLNDIEELKTERLGLRNRIE+K +YLQELE+Q++GLQNL+
Sbjct: 162 DIISKDKKEIQWKGLPRTSLNDIEELKTERLGLRNRIERKSSYLQELEEQFVGLQNLV 219


>Medtr4g077797.1 | transcription factor DP, E2 dimerization partner
           protein | HC | chr4:29865108-29869680 | 20130731
          Length = 342

 Score =  227 bits (579), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 107/118 (90%), Positives = 114/118 (96%)

Query: 1   MKVCEKVESKGRTTYNEVADELVAEFADPSNSTLSPDQQQYDEKNIRRRVYDALNVLMAM 60
           MKVCEKVESKGRTTYNEVADELVAEF+DPSN  LSPDQQQYDEKNIRRRVYDALNVLMAM
Sbjct: 98  MKVCEKVESKGRTTYNEVADELVAEFSDPSNGGLSPDQQQYDEKNIRRRVYDALNVLMAM 157

Query: 61  DIISKDKKEIQWKGLPRTSLNDIEELKTERLGLRNRIEKKRAYLQELEDQYIGLQNLI 118
           DIISKDKKEIQWKGLPRTSL+DIEELKT+RLGLR+RIE+K AYLQELE Q++GLQNLI
Sbjct: 158 DIISKDKKEIQWKGLPRTSLSDIEELKTQRLGLRSRIERKAAYLQELEQQFVGLQNLI 215