Miyakogusa Predicted Gene

Lj0g3v0292049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0292049.1 tr|Q67VQ4|Q67VQ4_ORYSJ BolA-like OS=Oryza sativa
subsp. japonica GN=OSJNBb0026F02.25 PE=2
SV=1,62.12,0.000000000000005,no description,BolA protein; BSL5715
PROTEIN,NULL; BOLA-LIKE PROTEIN-RELATED,NULL; BolA-like,BolA
pr,CUFF.19519.1
         (136 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g040145.1 | BolA family transcriptional regulator | HC | c...   170   4e-43

>Medtr1g040145.1 | BolA family transcriptional regulator | HC |
           chr1:14730710-14735741 | 20130731
          Length = 163

 Score =  170 bits (430), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 88/137 (64%), Positives = 106/137 (77%), Gaps = 8/137 (5%)

Query: 1   MRSQMFSFSSNTTLLRQALPVLVQPYKSILCRIAPPPNHGFVSNSPTLLRRSGGLPLHDS 60
           MR+Q+ S SSNTTLLR+ALPVLV+PY   L R   P +  F+ ++    R     P HD 
Sbjct: 1   MRAQVLSLSSNTTLLRRALPVLVRPY---LVRTTSPNHISFLRSTSQATR----FPKHDQ 53

Query: 61  LSSFI-LSPIRKFSSRATNINDAGSVDLPLMQSMEKKIKEQLNADSVIVKDAYGDGRHVS 119
              F  +S IRKF+SRATN+NDAGS+DLP++QSM++KIKEQLNA++V VKDAYGDGRHVS
Sbjct: 54  KLLFTSVSSIRKFTSRATNVNDAGSIDLPIIQSMQQKIKEQLNAEAVSVKDAYGDGRHVS 113

Query: 120 IDVVSTAFEGQSAVNRQ 136
           IDVVSTAFEGQSAVNRQ
Sbjct: 114 IDVVSTAFEGQSAVNRQ 130