Miyakogusa Predicted Gene

Lj0g3v0291799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291799.1 tr|F2U0N4|F2U0N4_SALS5 Hsp16-like protein
OS=Salpingoeca sp. (strain ATCC 50818) GN=PTSG_01546 PE=3
,51.95,0.000000000000001,CBS,Cystathionine beta-synthase, core;
seg,NULL,NODE_13170_length_636_cov_754.105347.path2.1
         (161 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g103550.2 | SNF1-related kinase regulatory subunit gamma 1...   209   1e-54
Medtr4g103550.1 | SNF1-related kinase regulatory subunit gamma 1...   209   1e-54
Medtr5g038570.1 | SNF1-related kinase regulatory subunit gamma 1...    77   7e-15
Medtr3g116850.1 | SNF1-related kinase regulatory subunit gamma 1...    51   5e-07

>Medtr4g103550.2 | SNF1-related kinase regulatory subunit gamma 1 |
           HC | chr4:42801133-42797980 | 20130731
          Length = 341

 Score =  209 bits (531), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 114/161 (70%), Gaps = 1/161 (0%)

Query: 1   MATMMQERPRSTEAKLGMRVEDLWDVMEPQLSPNEKLNACFESIPVSAFPLPPLNQEIEI 60
           MATM +E PRS EAKLGMRVEDLWDV E QLSPN+KLNACFESIPVSAFPLP  NQEIEI
Sbjct: 15  MATM-REMPRSPEAKLGMRVEDLWDVQEAQLSPNDKLNACFESIPVSAFPLPAKNQEIEI 73

Query: 61  KSDATLAEAVKILARHNVFSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQXXXXXX 120
           KSDATLAEAVKILARHN+ SAPVVDVDAPEDA+WIDRYIGIVEFAGIVVWILHQ      
Sbjct: 74  KSDATLAEAVKILARHNILSAPVVDVDAPEDATWIDRYIGIVEFAGIVVWILHQSEPPSP 133

Query: 121 XXXXXXXXXXXXXXKANGITFXXXXXXXXXXXXXXXXXNFF 161
                          ANG TF                 NFF
Sbjct: 134 RSPSTPTSASAIAAAANGNTFARELEALGLGSAATTSGNFF 174


>Medtr4g103550.1 | SNF1-related kinase regulatory subunit gamma 1 |
           HC | chr4:42801133-42797980 | 20130731
          Length = 432

 Score =  209 bits (531), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 114/161 (70%), Gaps = 1/161 (0%)

Query: 1   MATMMQERPRSTEAKLGMRVEDLWDVMEPQLSPNEKLNACFESIPVSAFPLPPLNQEIEI 60
           MATM +E PRS EAKLGMRVEDLWDV E QLSPN+KLNACFESIPVSAFPLP  NQEIEI
Sbjct: 15  MATM-REMPRSPEAKLGMRVEDLWDVQEAQLSPNDKLNACFESIPVSAFPLPAKNQEIEI 73

Query: 61  KSDATLAEAVKILARHNVFSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQXXXXXX 120
           KSDATLAEAVKILARHN+ SAPVVDVDAPEDA+WIDRYIGIVEFAGIVVWILHQ      
Sbjct: 74  KSDATLAEAVKILARHNILSAPVVDVDAPEDATWIDRYIGIVEFAGIVVWILHQSEPPSP 133

Query: 121 XXXXXXXXXXXXXXKANGITFXXXXXXXXXXXXXXXXXNFF 161
                          ANG TF                 NFF
Sbjct: 134 RSPSTPTSASAIAAAANGNTFARELEALGLGSAATTSGNFF 174


>Medtr5g038570.1 | SNF1-related kinase regulatory subunit gamma 1 |
           HC | chr5:16949833-16952411 | 20130731
          Length = 449

 Score = 77.0 bits (188), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 52/80 (65%)

Query: 34  NEKLNACFESIPVSAFPLPPLNQEIEIKSDATLAEAVKILARHNVFSAPVVDVDAPEDAS 93
            E L   F  IPVS+FP  P  + +EI +D  + EAVKIL+  N+ +APV D DA   + 
Sbjct: 40  QETLTDSFAKIPVSSFPGVPGGKVVEILADTPVGEAVKILSESNILAAPVKDPDAGIGSD 99

Query: 94  WIDRYIGIVEFAGIVVWILH 113
           W DRY+GI++++ I++W++ 
Sbjct: 100 WRDRYLGIIDYSAIILWVME 119


>Medtr3g116850.1 | SNF1-related kinase regulatory subunit gamma 1 |
           HC | chr3:54642388-54640074 | 20130731
          Length = 419

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 5   MQERPRSTEAKLGMRVEDLWDVMEPQLSPNEKLNACFESIPVSAFPLPPLNQEIEIKSDA 64
           MQ R    +  +  + ED  D     +     L    + IP+S+      +  +EIKS  
Sbjct: 1   MQSRKIVNDGLVAEKKEDNND-QNVHVDSATALQQFLDHIPISSISGINNSHVLEIKSGG 59

Query: 65  TLAEAVKILARHNVFSAPVVDVDAPEDAS--WIDRYIGIVEFAGIVVWILHQ 114
           T+ +A+ +L   + F A +VDV   E +S  + DRYIG + F  +V+W L +
Sbjct: 60  TIRDAIHMLYEKDTFGAVIVDVLNTETSSIRFSDRYIGFISFPNMVLWSLEE 111