Miyakogusa Predicted Gene

Lj0g3v0291749.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291749.1 Non Characterized Hit- tr|G7I570|G7I570_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,72.19,0,seg,NULL; DUF3537,Protein of unknown function
DUF3537; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NU,NODE_44062_length_1623_cov_18.394331.path1.1
         (453 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g009230.1 | extracellular ligand-gated ion channel protein...   702   0.0  
Medtr3g054010.1 | extracellular ligand-gated ion channel protein...   258   8e-69
Medtr2g025160.1 | extracellular ligand-gated ion channel protein...   236   4e-62
Medtr8g080210.1 | extracellular ligand-gated ion channel protein...   189   5e-48
Medtr2g025160.2 | extracellular ligand-gated ion channel protein...   187   2e-47

>Medtr1g009230.1 | extracellular ligand-gated ion channel protein |
           HC | chr1:1241261-1238758 | 20130731
          Length = 446

 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/453 (77%), Positives = 387/453 (85%), Gaps = 13/453 (2%)

Query: 2   NNPSTNETSIDIGNSSGRRVSFAAENHPHPNGELTQHHQNNNVPLLLQPSYARSKSLVYD 61
           +  ST +T+IDI NSS +RVSF+ +   H      QH    NVPLLLQPSYARSKS+++D
Sbjct: 4   STESTKDTTIDIDNSSSKRVSFSDQQQQH------QH----NVPLLLQPSYARSKSMIFD 53

Query: 62  ELRNFRISLKWCALDHSSCVGKLISYFSFIFLTVIVPLFTSLFVEVPASAPEDDPFSFNK 121
           ELRNFRI LKWCALDHSSCVGKLISY SFIFLT +VPLFT+LFV+V AS+PE DP S NK
Sbjct: 54  ELRNFRICLKWCALDHSSCVGKLISYVSFIFLTFVVPLFTTLFVQVSASSPEVDPISLNK 113

Query: 122 LVQIPESGLAIIAFFTLSCFFRRYGLRQLLFLDALEDDTTYVRRGYTRELEKAFKYLAYI 181
           LVQIPES LAII+FFTL  FFRRYGLRQLLFLDAL+DDTTYVRRGY RELEKAF+YLAYI
Sbjct: 114 LVQIPESALAIISFFTLYRFFRRYGLRQLLFLDALQDDTTYVRRGYARELEKAFRYLAYI 173

Query: 182 VLPSFFVELAHKITFFSAVKISTPYNTSPVLPLKVILFVLVLVSWVYRTGVFLLVCVFFR 241
           +LPSFFVELAHKI FFSAVKIS P N S   PL  I+FV +L+SW+YRTGV+LLVCV F+
Sbjct: 174 ILPSFFVELAHKIIFFSAVKISAP-NLSAGFPLHSIVFVFMLLSWLYRTGVYLLVCVIFK 232

Query: 242 LTCQLQILRFEGVHKLFEGCGSDAGVIFREHVRIRRQLWVTSHRYRFFIVWCVVTMTVSQ 301
           LTCQLQILRFEGVHKLFEGCGS+AGVIF+EHVRIRRQLW+ SHRYRFFI+ CVVTM+VSQ
Sbjct: 233 LTCQLQILRFEGVHKLFEGCGSEAGVIFKEHVRIRRQLWIISHRYRFFIICCVVTMSVSQ 292

Query: 302 LGALLLVLASKSDKTFFNSGDLVICSAVQLSGFFLCILGAAKITHRAQGIVSIATRWHML 361
           LG+LLLVLASKS+KTFFNSGDLVICSAVQLSGFFLCILGAAKITHRAQGIVSIATRWHML
Sbjct: 293 LGSLLLVLASKSEKTFFNSGDLVICSAVQLSGFFLCILGAAKITHRAQGIVSIATRWHML 352

Query: 362 VTNASVESEQCKAEIPEGLAXXXXXXXXXIHISVV--PRLSSFQTRQSLVTYLQHNHGGI 419
           VTNA  ESEQCK  + E LA              +   RLSSFQTRQSLVTYLQHNHGGI
Sbjct: 353 VTNAFAESEQCKDNMSEALASDSSDSDSSDIHISIIPQRLSSFQTRQSLVTYLQHNHGGI 412

Query: 420 TVYGFSLDRGLLHTLFAFEFSLVLWILSKVVVL 452
           T+YGF+LDRG+LHTLFAFEFS+VLWILSKVVVL
Sbjct: 413 TLYGFALDRGMLHTLFAFEFSIVLWILSKVVVL 445


>Medtr3g054010.1 | extracellular ligand-gated ion channel protein |
           HC | chr3:21416001-21420848 | 20130731
          Length = 450

 Score =  258 bits (659), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 162/467 (34%), Positives = 239/467 (51%), Gaps = 44/467 (9%)

Query: 7   NETSIDIGNSSGRRVSFAAENH-PHPNGELTQHHQNNNVPLLLQPSYARSKSLVYDELRN 65
           NETS     +  ++++FA E+  P     + +H  N            RS S V DEL  
Sbjct: 2   NETS-----TPTKKINFAEESLLPKTTTNINRHKFN------------RSISHVNDELHT 44

Query: 66  FRISLKWCALDHSSCVGKLISYFSFIFLTVIVPLFTSLFVEV-PASAPEDDPFSFNKLVQ 124
           FR  L+W  +D S+ +   +S+F F    + VP  +  F+      A    P+  + +VQ
Sbjct: 45  FRSYLRWMCVDQSNAIHATLSWFVFFVFALAVPALSHFFLACEDCDARHSRPY--DSVVQ 102

Query: 125 IPESGLAIIAFFTLSCFFRRYGLRQLLFLDALEDDTTYVRRGYTRELEKAFKYLAYIVLP 184
           I  S +A+++F  LS F ++YGLR+ LFLD L D++  VR  Y  +L ++ K ++    P
Sbjct: 103 ISLSSVAVLSFLCLSTFVKKYGLRRFLFLDKLCDESENVRMNYMVQLNRSLKLISVFSGP 162

Query: 185 SFFVELAHKITFFSAVKISTPYNTSPVLPLKVILFVLVLVSWVYRTGVFLLVCVFFRLTC 244
            F     +KI ++++     P+  +  L    +  +L L SW+YRT    LVCV FRL C
Sbjct: 163 CFIAMATYKIWWYASGGSQIPFLGNVYLS-DAVACILELCSWLYRTTTIFLVCVLFRLIC 221

Query: 245 QLQILRFEGVHKLFEGCGSDAGVIFREHVRIRRQLWVTSHRYRFFIVWCVVTMTVSQLGA 304
            LQILR +    LF    SD   +  EH+RIRR L + SHRYR FI+  +V +T SQ   
Sbjct: 222 HLQILRLKDFATLFH-VDSDVHSVMSEHLRIRRHLRIISHRYRAFILLALVLVTGSQFAC 280

Query: 305 LLLVLASKSDKTFFNSGDLVICSAVQLSGFFLCILGAAKITHRAQGIVSIATRWHMLVT- 363
           LL+ + ++ D   + +G+L +CS   LS   +    A KITH+AQ I  +A +WH+  T 
Sbjct: 281 LLVTMKARHDLNVYKTGELALCSVTLLSALSIMFRSATKITHKAQAITGLAAKWHVCATL 340

Query: 364 ---NASVESEQCKAEIP----------EGLAXXXXXXXXXIHIS---VVPRLS----SFQ 403
              +   E E   A+I           +G +           I    ++P  S    S+Q
Sbjct: 341 DSFDGVGEGETLSAQISRERIYPSVGTDGESETDDAGSEEDEIDTTKMIPSYSYSTISYQ 400

Query: 404 TRQSLVTYLQHNHGGITVYGFSLDRGLLHTLFAFEFSLVLWILSKVV 450
            RQ+LV Y ++N  GITVYGF LDR  LHT+F  E SLVLW+L K +
Sbjct: 401 KRQALVNYFENNKAGITVYGFMLDRSTLHTIFGIEMSLVLWLLGKTI 447


>Medtr2g025160.1 | extracellular ligand-gated ion channel protein |
           HC | chr2:8949512-8952434 | 20130731
          Length = 431

 Score =  236 bits (602), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 141/409 (34%), Positives = 217/409 (53%), Gaps = 24/409 (5%)

Query: 62  ELRNFRISLKWCALDHSSCVGKLISYFSFIFLTVIVPLFTSLFVEVPASAPEDDPFSFNK 121
           ELR FR  L+W  +D S+     IS+  F  L  +VP+ +   ++   +   D    ++ 
Sbjct: 25  ELRRFRAYLRWVYVDQSNLCKAGISWSVFFTLAYVVPILSHFLLDCSTTCDADHRRPYHV 84

Query: 122 LVQIPESGLAIIAFFTLSCFFRRYGLRQLLFLDALEDDTTYVRRGYTRELEKAFKYLAYI 181
            VQI  S  A ++F +LS + R+YG  + LFLD + D++  ++RGY  ++++  K +   
Sbjct: 85  PVQISLSVFATLSFISLSKWDRKYGFSKFLFLDKVSDESLKIQRGYAIQMKRTMKLILLW 144

Query: 182 VLPSFFVELAHKITFFSAVKISTPYNTSPVLPLKVILFVLVLVSWVYRTGVFLLVCVFFR 241
            LP F  +  +KI ++ +     PY    V    +IL  L L SW YRT +F LVCV FR
Sbjct: 145 GLPCFICQCVYKIWWYISGASQIPY-YGEVYVSGIILCTLELCSWFYRTSIFFLVCVLFR 203

Query: 242 LTCQLQILRFEGVHKLFEGCGSDAGVIFREHVRIRRQLWVTSHRYRFFIVWCVVTMTVSQ 301
           L   LQI R +    +F+   ++ G I  EH+RIRR L V SHR+R FI+  ++ +T SQ
Sbjct: 204 LIGYLQIQRLDEFAPVFQR-ETEVGTILLEHLRIRRNLRVISHRFRAFILSSLLLVTASQ 262

Query: 302 LGALLLVLASKSDKTFFNSGDLVICSAVQLSGFFLCILGAAKITHRAQGIVSIATRWHML 361
           L  LL+V+   +D      G+L + S   +SG ++ +  A KITH+AQ +  +A++WH+ 
Sbjct: 263 LIFLLMVIKPHADVDILKGGELGLVSITLVSGLYILLRSATKITHKAQSLTGLASKWHIC 322

Query: 362 VTNASVESEQCKAEIPEGLAXXXXXXXXXI-----------------HISVVP---RLSS 401
            T  S ++     E P  L          I                 +  ++P   R  S
Sbjct: 323 ATINSFDN--IDGETPTALIASAQAMAADISWGSSEDESGDEEDELNNTKMMPIQTRTIS 380

Query: 402 FQTRQSLVTYLQHNHGGITVYGFSLDRGLLHTLFAFEFSLVLWILSKVV 450
           F  RQ+LVTY+++N  GITVYGF LDR  LH++F  + +L LW+L+K V
Sbjct: 381 FHKRQALVTYMENNRAGITVYGFMLDRTWLHSIFGIQLALCLWLLNKTV 429


>Medtr8g080210.1 | extracellular ligand-gated ion channel protein |
           HC | chr8:34461075-34457370 | 20130731
          Length = 498

 Score =  189 bits (480), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 203/413 (49%), Gaps = 31/413 (7%)

Query: 55  SKSLVYDELRNFRISLKWCALDHSSCVGKLISYFSFIFLTVIVPLFTSLFVEVPASAPED 114
           +K+ V   L    + L     +  S +  +I +  F  L V VPL  +L++    S  E 
Sbjct: 44  NKTEVDKSLARLELFLNILGFNPRSILSSIICWSGFFTLGVAVPL-VALWMG-DCSECEK 101

Query: 115 DPFSFNKLVQIP-ESGLAIIAFFTLSCFFRRYGLRQLLFLDALEDDTTYVRRGYTRELEK 173
              S  ++V +  ++ LA ++   LS   R+YGLR+ LF+D          R Y  ++  
Sbjct: 102 YELSGCEMVIVAFQASLAAVSLLCLSHCLRKYGLRRFLFVDRYTGHIAAFHRDYVNQISG 161

Query: 174 AFKYLAYIVLPSFFVELAHKITFFSAVKISTPYNTSPVLPLKVILFVLVLVSWVYRTGVF 233
           + +     V P F ++   +I       I   Y         + +F+ ++VSW Y + + 
Sbjct: 162 SLRLFILWVFPCFLLKTVREI-------IRISYIQHGSWGFSIAIFIALVVSWTYVSAIS 214

Query: 234 LLVCVFFRLTCQLQILRFEGVHKLFEGCGSDAGVIFREHVRIRRQLWVTSHRYRFFIVWC 293
           L  C+ F L C LQ++ F+   KL E   SD  V   EH+R+R  L   SHR+R +++  
Sbjct: 215 LTACIMFHLVCNLQVIHFDDYGKLLER-ESDVLVFLEEHMRLRYHLSKISHRFRVYLLLE 273

Query: 294 VVTMTVSQLGALLLVLASKSDKTFFNSGDLVICSAVQLSGFFLCILGAAKITHRAQGIVS 353
            + +TVSQ+  LL +   +   T  N GD  + + VQ+ G  +C+  A +I+HRAQG+VS
Sbjct: 274 FLVVTVSQVVTLLQITGYRDMITMVNGGDFAVSTLVQVVGIIICLHAATRISHRAQGVVS 333

Query: 354 IATRWHMLVTNASVESEQCKAEIPEGLAXXXXXXXXXIHIS------------------- 394
           +A+RWH + T AS ++ Q ++    G +         IH+                    
Sbjct: 334 LASRWHAIATCASSDNSQMRSSASAG-SLEVANHLNSIHLDYSESDLESLDFGGMAVNTQ 392

Query: 395 VVPRLSSFQTRQSLVTYLQHNHGGITVYGFSLDRGLLHTLFAFEFSLVLWILS 447
           ++  +SS   RQ+ V YLQ N GGIT++G+++DR L++T+F  E SLV ++L 
Sbjct: 393 LISYMSSHHKRQAFVMYLQSNPGGITIFGWTVDRSLVNTIFFLELSLVTFVLD 445


>Medtr2g025160.2 | extracellular ligand-gated ion channel protein |
           HC | chr2:8949512-8952434 | 20130731
          Length = 408

 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 173/319 (54%), Gaps = 4/319 (1%)

Query: 62  ELRNFRISLKWCALDHSSCVGKLISYFSFIFLTVIVPLFTSLFVEVPASAPEDDPFSFNK 121
           ELR FR  L+W  +D S+     IS+  F  L  +VP+ +   ++   +   D    ++ 
Sbjct: 25  ELRRFRAYLRWVYVDQSNLCKAGISWSVFFTLAYVVPILSHFLLDCSTTCDADHRRPYHV 84

Query: 122 LVQIPESGLAIIAFFTLSCFFRRYGLRQLLFLDALEDDTTYVRRGYTRELEKAFKYLAYI 181
            VQI  S  A ++F +LS + R+YG  + LFLD + D++  ++RGY  ++++  K +   
Sbjct: 85  PVQISLSVFATLSFISLSKWDRKYGFSKFLFLDKVSDESLKIQRGYAIQMKRTMKLILLW 144

Query: 182 VLPSFFVELAHKITFFSAVKISTPYNTSPVLPLKVILFVLVLVSWVYRTGVFLLVCVFFR 241
            LP F  +  +KI ++ +     PY    V    +IL  L L SW YRT +F LVCV FR
Sbjct: 145 GLPCFICQCVYKIWWYISGASQIPYY-GEVYVSGIILCTLELCSWFYRTSIFFLVCVLFR 203

Query: 242 LTCQLQILRFEGVHKLFEGCGSDAGVIFREHVRIRRQLWVTSHRYRFFIVWCVVTMTVSQ 301
           L   LQI R +    +F+   ++ G I  EH+RIRR L V SHR+R FI+  ++ +T SQ
Sbjct: 204 LIGYLQIQRLDEFAPVFQR-ETEVGTILLEHLRIRRNLRVISHRFRAFILSSLLLVTASQ 262

Query: 302 LGALLLVLASKSDKTFFNSGDLVICSAVQLSGFFLCILGAAKITHRAQGIVSIATRWHML 361
           L  LL+V+   +D      G+L + S   +SG ++ +  A KITH+AQ +  +A++WH+ 
Sbjct: 263 LIFLLMVIKPHADVDILKGGELGLVSITLVSGLYILLRSATKITHKAQSLTGLASKWHIC 322

Query: 362 VTNASVESEQCKAEIPEGL 380
            T  S ++     E P  L
Sbjct: 323 ATINSFDN--IDGETPTAL 339