Miyakogusa Predicted Gene

Lj0g3v0291709.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291709.2 Non Characterized Hit- tr|D8SKU4|D8SKU4_SELML
Putative uncharacterized protein OS=Selaginella
moelle,48.11,0.000000000001, ,CUFF.19501.2
         (232 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g022730.1 | hypothetical protein | HC | chr6:7953866-79451...   470   e-133

>Medtr6g022730.1 | hypothetical protein | HC | chr6:7953866-7945164
           | 20130731
          Length = 724

 Score =  470 bits (1210), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 221/232 (95%), Positives = 228/232 (98%)

Query: 1   MTMDREKEREIELESAMYTNCLLLGLDPAIIGLGASNSTPRVGLFRHSNPKLGEQLLYFI 60
           MTMDREKEREIELESAMYTNCLLLGLDP++IG+GASNSTPRVG FRHSNPKLGEQLLYFI
Sbjct: 1   MTMDREKEREIELESAMYTNCLLLGLDPSVIGVGASNSTPRVGAFRHSNPKLGEQLLYFI 60

Query: 61  LSSLRGPIQSAKDFDKVWPIFDSAQSRDFRKVVQGIISELESPGALPRSNSRVSSLATCC 120
           LSSLRGPIQS+KDFDKVWPIFDSAQSRDFRKVVQ IISELES GALPRSNSRVSSLATCC
Sbjct: 61  LSSLRGPIQSSKDFDKVWPIFDSAQSRDFRKVVQAIISELESQGALPRSNSRVSSLATCC 120

Query: 121 GPRFVELLWQLSLHALREVHRRTFTADLASNPLPAPLTDVAFSHAATLLPVTKARIALER 180
           GPRFVELLWQLSLHALREVHRRTFT+D+ASNPLP PLTDVAFSHAATLLPVTKARIALER
Sbjct: 121 GPRFVELLWQLSLHALREVHRRTFTSDIASNPLPTPLTDVAFSHAATLLPVTKARIALER 180

Query: 181 RKFLKNAEMAVQRQAMWSNLAHEMTAEFRGLCAEEAYLQQELEKLHDLRNKV 232
           RKFL+NAEMAVQRQAMWSNLAHEMTAEFRGLCAEEAYLQQELEKLHDLRNKV
Sbjct: 181 RKFLENAEMAVQRQAMWSNLAHEMTAEFRGLCAEEAYLQQELEKLHDLRNKV 232