Miyakogusa Predicted Gene

Lj0g3v0291699.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291699.2 Non Characterized Hit- tr|K3YMX8|K3YMX8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si015612,30.77,2e-18,seg,NULL,CUFF.19500.2
         (393 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g022730.1 | hypothetical protein | HC | chr6:7953866-79451...   558   e-159

>Medtr6g022730.1 | hypothetical protein | HC | chr6:7953866-7945164
           | 20130731
          Length = 724

 Score =  558 bits (1439), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 298/427 (69%), Positives = 321/427 (75%), Gaps = 36/427 (8%)

Query: 1   MDHSSQTPYSDVLSGQHMDLNAVQMDNE-ENDGSHFSSETSTRVDDRTGRVHQTVDVAEV 59
           MD SSQ PYSDVLSG   DL++VQ DN+ E DGSHFSSET T VDDR GRVHQTVD+AEV
Sbjct: 300 MDQSSQAPYSDVLSGDSGDLSSVQTDNQGEIDGSHFSSETLTTVDDRNGRVHQTVDIAEV 359

Query: 60  IRRWTHALQRIHKQSLLLAKANDGEGPDILRSAQEEGSGGHAESLAATLAEHQQHLASFQ 119
           IRRWTHALQRIHKQSL LAKANDGEGPDILRSAQE  S GHAESLAATLAEHQQHLASFQ
Sbjct: 360 IRRWTHALQRIHKQSLHLAKANDGEGPDILRSAQEGSSSGHAESLAATLAEHQQHLASFQ 419

Query: 120 VLINQLKDVAPTIQKSISECTEKVNCIASNLPP--MNRHHGRSTSPVQAQSSGRMDSSND 177
           VLINQLKDVAPTIQKSISECTEKVNC+ASNL P  +NRHH +STSP+QAQSSGRM+S  D
Sbjct: 420 VLINQLKDVAPTIQKSISECTEKVNCLASNLTPHLLNRHHSQSTSPIQAQSSGRMESGTD 479

Query: 178 DVGEVTSRISNFQLDKVSASPPTLKLPQLFSLTPSSGKAGNVQRRHG------------- 224
           DVGE+ SR+SN QLDKVS SP TLKLPQLFS+TPS GKAGNVQRRHG             
Sbjct: 480 DVGELASRMSNVQLDKVSVSPSTLKLPQLFSMTPS-GKAGNVQRRHGYASQTSQTENLSV 538

Query: 225 -----------------SDSSFVKNLKRSVRETALXXXXXXXXXXXXXXXXXXXXX-FFA 266
                            SDS FV+NLKRSVRE AL                      FF 
Sbjct: 539 SKSLDAPSNNEVASSEGSDSLFVQNLKRSVREAALSLQSYNLESSRNSSHSDGSSEHFFV 598

Query: 267 PLSETGFSHLDAEKRAASSRSKRLFESQMGDSFFESHASDGHGESIDEFPDMLTDLEMLS 326
           PLSET FSH D EK   S RSKRLF S M D   ESHASD HG   DEF DML+D+E LS
Sbjct: 599 PLSETSFSHSDTEKNVTSLRSKRLFVSPMDDPLLESHASDEHGSKFDEFSDMLSDMERLS 658

Query: 327 DYDHVNGFLSYTGSNATSDAQQSIFDFEDAQDQVFSPPLLMDSTLLADSFEDLLAPLSET 386
             D+VNGFLSYTGSN TSDA++S+FDFEDAQ +VFSPP+LMDS+LL D FEDLLAPLSET
Sbjct: 659 YSDNVNGFLSYTGSNETSDARRSMFDFEDAQ-EVFSPPMLMDSSLLTDQFEDLLAPLSET 717

Query: 387 ETALIDH 393
           +TALIDH
Sbjct: 718 DTALIDH 724