Miyakogusa Predicted Gene

Lj0g3v0291659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291659.1 Non Characterized Hit- tr|K4BX66|K4BX66_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,72.58,1e-18,DUF789,Protein of unknown function DUF789;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.19494.1
         (62 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g110070.1 | DUF789 family protein | HC | chr1:49637958-496...   112   6e-26
Medtr6g082450.1 | DUF789 family protein | HC | chr6:30867483-308...    86   1e-17
Medtr4g120990.1 | DUF789 family protein | HC | chr4:50085029-500...    79   1e-15
Medtr2g035080.1 | DUF789 family protein | HC | chr2:13476671-134...    75   2e-14
Medtr6g066280.1 | plant/F9H3-4 protein | HC | chr6:24650332-2465...    52   9e-08
Medtr4g044297.2 | plant/F9H3-4 protein | HC | chr4:14861532-1485...    52   1e-07
Medtr4g044297.1 | plant/F9H3-4 protein | HC | chr4:14861145-1485...    52   1e-07
Medtr2g090210.1 | plant/F9H3-4 protein | HC | chr2:38298031-3830...    51   2e-07

>Medtr1g110070.1 | DUF789 family protein | HC |
           chr1:49637958-49633404 | 20130731
          Length = 408

 Score =  112 bits (281), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 57/61 (93%)

Query: 1   MDGVPKMSLPVFGLASYKFKGSLWTPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFFS 60
           +DGVPKMSLPVFGLASYKFKG LWTP+GGYERQL+ SL+Q AD WLRLLQV+HPDFLFFS
Sbjct: 348 IDGVPKMSLPVFGLASYKFKGPLWTPSGGYERQLSNSLLQNADKWLRLLQVSHPDFLFFS 407

Query: 61  R 61
           R
Sbjct: 408 R 408


>Medtr6g082450.1 | DUF789 family protein | HC |
           chr6:30867483-30862197 | 20130731
          Length = 401

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 47/59 (79%)

Query: 1   MDGVPKMSLPVFGLASYKFKGSLWTPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFF 59
           ++GVPK+SLP F +ASYK KG +W  NG    QLA SL+QAAD+WLRL+QVNHPD+ FF
Sbjct: 335 INGVPKISLPTFAMASYKLKGPIWMQNGVSGNQLANSLLQAADNWLRLVQVNHPDYQFF 393


>Medtr4g120990.1 | DUF789 family protein | HC |
           chr4:50085029-50090392 | 20130731
          Length = 395

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/59 (61%), Positives = 46/59 (77%)

Query: 2   DGVPKMSLPVFGLASYKFKGSLWTPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFFS 60
           D   K+SLP+FGLA +KFK S+W P+G  E Q A SL +AA++WLRLLQVNHPD+ FF+
Sbjct: 330 DISSKLSLPIFGLAHHKFKISIWDPDGVSESQKANSLARAAENWLRLLQVNHPDYNFFT 388


>Medtr2g035080.1 | DUF789 family protein | HC |
           chr2:13476671-13471541 | 20130731
          Length = 401

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 6   KMSLPVFGLASYKFKGSLWTPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFFS 60
           K+SLP+FGLA  KFK S+W P G  E Q A SL +AAD+W+R LQVNHPD+ FFS
Sbjct: 340 KLSLPIFGLAFTKFKISVWDPEGDSEDQKANSLRRAADNWIRQLQVNHPDYKFFS 394


>Medtr6g066280.1 | plant/F9H3-4 protein | HC |
           chr6:24650332-24653230 | 20130731
          Length = 329

 Score = 52.4 bits (124), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/54 (46%), Positives = 33/54 (61%)

Query: 7   MSLPVFGLASYKFKGSLWTPNGGYERQLAISLVQAADSWLRLLQVNHPDFLFFS 60
           +SLP FGLA+YK +  LW      + +    L  AADSWL+ L V+H DF FF+
Sbjct: 271 ISLPPFGLATYKMQSDLWLNTDPNDYEKISYLCSAADSWLKQLNVHHHDFDFFT 324


>Medtr4g044297.2 | plant/F9H3-4 protein | HC |
           chr4:14861532-14856514 | 20130731
          Length = 306

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)

Query: 7   MSLPVFGLASYKFKGSLWTPNG-GYERQLAISLVQAADSWLRLLQVNHPDFLFF 59
           +SL  FGLA+YK +G+LW     G +++  +SL   ADSWL+ L+V+H DF +F
Sbjct: 247 ISLQPFGLATYKMQGNLWVSGKCGRDQEKLVSLCSVADSWLKQLKVHHHDFNYF 300


>Medtr4g044297.1 | plant/F9H3-4 protein | HC |
           chr4:14861145-14856487 | 20130731
          Length = 306

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)

Query: 7   MSLPVFGLASYKFKGSLWTPNG-GYERQLAISLVQAADSWLRLLQVNHPDFLFF 59
           +SL  FGLA+YK +G+LW     G +++  +SL   ADSWL+ L+V+H DF +F
Sbjct: 247 ISLQPFGLATYKMQGNLWVSGKCGRDQEKLVSLCSVADSWLKQLKVHHHDFNYF 300


>Medtr2g090210.1 | plant/F9H3-4 protein | HC |
           chr2:38298031-38302273 | 20130731
          Length = 314

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 2/55 (3%)

Query: 7   MSLPVFGLASYKFKG-SLWTP-NGGYERQLAISLVQAADSWLRLLQVNHPDFLFF 59
           +SLP FGLA+YK +G ++W   N G +++  +SL+  ADSWL+ L+V H DF +F
Sbjct: 254 ISLPAFGLATYKMQGGNVWIGGNRGRDQERLMSLLSVADSWLKQLRVQHHDFNYF 308