Miyakogusa Predicted Gene

Lj0g3v0291479.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291479.1 tr|B9H204|B9H204_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_817748 PE=4
SV=1,45.69,0.000000000000001,
,NODE_85545_length_479_cov_42.432152.path1.1
         (134 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g011640.1 | Serine/Threonine-kinase abkC-like protein, put...   183   4e-47
Medtr4g091510.2 | Serine/Threonine-kinase abkC-like protein, put...   127   3e-30
Medtr4g091510.1 | Serine/Threonine-kinase abkC-like protein, put...   127   3e-30
Medtr4g091510.4 | Serine/Threonine-kinase abkC-like protein, put...   127   3e-30
Medtr4g091510.3 | Serine/Threonine-kinase abkC-like protein, put...   127   3e-30

>Medtr2g011640.1 | Serine/Threonine-kinase abkC-like protein,
           putative | HC | chr2:2858995-2852152 | 20130731
          Length = 675

 Score =  183 bits (465), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 98/137 (71%), Positives = 105/137 (76%), Gaps = 3/137 (2%)

Query: 1   MLRDIKRAAQSVCKLSRG--IGLQRNGPIGSVGSNIHQRRVYMQYKFPSEARSSLLWHAT 58
           MLR IKRAAQSV K++RG  + + RNGPI  VG N H  R YM YK  SEA SS    AT
Sbjct: 52  MLRAIKRAAQSVHKINRGRYVEVSRNGPIVPVGPNTHHCRFYMPYKLHSEAHSSFWGLAT 111

Query: 59  RENFNKCCSFRSFSVTSASNGVTRHSQIAWKRLYRKYCSSDDGA-FPPTIYMIAQAVSLA 117
           RE+FNKC SFR FSV+SASN  T HSQIAWKRLYRKYCSS D + F PTI MIAQAVSLA
Sbjct: 112 RESFNKCGSFRKFSVSSASNEFTHHSQIAWKRLYRKYCSSGDSSRFSPTINMIAQAVSLA 171

Query: 118 LARSYLLVPGIFAFTCG 134
           L RSYLLVPGIFAFTCG
Sbjct: 172 LTRSYLLVPGIFAFTCG 188


>Medtr4g091510.2 | Serine/Threonine-kinase abkC-like protein,
           putative | HC | chr4:36254388-36262346 | 20130731
          Length = 630

 Score =  127 bits (319), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/136 (52%), Positives = 92/136 (67%), Gaps = 3/136 (2%)

Query: 1   MLRDIKRAAQSVCKL--SRGIGLQRNGPIGSVGSNIHQRRVYMQYKFPSEARSSLLWHAT 58
           ML  I RAA+S+ ++  SR +G+ RN  + SV  NI++ R YMQYKFP+E  SS++W   
Sbjct: 6   MLGHIGRAAESILRIHKSRYLGVSRNAGLLSVAPNINRCRTYMQYKFPNEGCSSIMWRGA 65

Query: 59  RENFNKCCSFRSFSVTSASNGVTRHSQIAWKRLYRKYCSSDDGAFPPTIYMIAQAVSLAL 118
           RENF+K CSF +F+  SA N     S+IAWK L RK   S+  +   +++MIAQAVSLAL
Sbjct: 66  RENFHKGCSFWNFTAFSAKNITAHKSRIAWK-LLRKIYPSNGYSGSTSVHMIAQAVSLAL 124

Query: 119 ARSYLLVPGIFAFTCG 134
           ARS  LVP IFAF CG
Sbjct: 125 ARSCFLVPSIFAFACG 140


>Medtr4g091510.1 | Serine/Threonine-kinase abkC-like protein,
           putative | HC | chr4:36257181-36262049 | 20130731
          Length = 630

 Score =  127 bits (319), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/136 (52%), Positives = 92/136 (67%), Gaps = 3/136 (2%)

Query: 1   MLRDIKRAAQSVCKL--SRGIGLQRNGPIGSVGSNIHQRRVYMQYKFPSEARSSLLWHAT 58
           ML  I RAA+S+ ++  SR +G+ RN  + SV  NI++ R YMQYKFP+E  SS++W   
Sbjct: 6   MLGHIGRAAESILRIHKSRYLGVSRNAGLLSVAPNINRCRTYMQYKFPNEGCSSIMWRGA 65

Query: 59  RENFNKCCSFRSFSVTSASNGVTRHSQIAWKRLYRKYCSSDDGAFPPTIYMIAQAVSLAL 118
           RENF+K CSF +F+  SA N     S+IAWK L RK   S+  +   +++MIAQAVSLAL
Sbjct: 66  RENFHKGCSFWNFTAFSAKNITAHKSRIAWK-LLRKIYPSNGYSGSTSVHMIAQAVSLAL 124

Query: 119 ARSYLLVPGIFAFTCG 134
           ARS  LVP IFAF CG
Sbjct: 125 ARSCFLVPSIFAFACG 140


>Medtr4g091510.4 | Serine/Threonine-kinase abkC-like protein,
           putative | HC | chr4:36257889-36262318 | 20130731
          Length = 625

 Score =  127 bits (319), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/136 (52%), Positives = 92/136 (67%), Gaps = 3/136 (2%)

Query: 1   MLRDIKRAAQSVCKL--SRGIGLQRNGPIGSVGSNIHQRRVYMQYKFPSEARSSLLWHAT 58
           ML  I RAA+S+ ++  SR +G+ RN  + SV  NI++ R YMQYKFP+E  SS++W   
Sbjct: 1   MLGHIGRAAESILRIHKSRYLGVSRNAGLLSVAPNINRCRTYMQYKFPNEGCSSIMWRGA 60

Query: 59  RENFNKCCSFRSFSVTSASNGVTRHSQIAWKRLYRKYCSSDDGAFPPTIYMIAQAVSLAL 118
           RENF+K CSF +F+  SA N     S+IAWK L RK   S+  +   +++MIAQAVSLAL
Sbjct: 61  RENFHKGCSFWNFTAFSAKNITAHKSRIAWK-LLRKIYPSNGYSGSTSVHMIAQAVSLAL 119

Query: 119 ARSYLLVPGIFAFTCG 134
           ARS  LVP IFAF CG
Sbjct: 120 ARSCFLVPSIFAFACG 135


>Medtr4g091510.3 | Serine/Threonine-kinase abkC-like protein,
           putative | HC | chr4:36254388-36262327 | 20130731
          Length = 625

 Score =  127 bits (319), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/136 (52%), Positives = 92/136 (67%), Gaps = 3/136 (2%)

Query: 1   MLRDIKRAAQSVCKL--SRGIGLQRNGPIGSVGSNIHQRRVYMQYKFPSEARSSLLWHAT 58
           ML  I RAA+S+ ++  SR +G+ RN  + SV  NI++ R YMQYKFP+E  SS++W   
Sbjct: 1   MLGHIGRAAESILRIHKSRYLGVSRNAGLLSVAPNINRCRTYMQYKFPNEGCSSIMWRGA 60

Query: 59  RENFNKCCSFRSFSVTSASNGVTRHSQIAWKRLYRKYCSSDDGAFPPTIYMIAQAVSLAL 118
           RENF+K CSF +F+  SA N     S+IAWK L RK   S+  +   +++MIAQAVSLAL
Sbjct: 61  RENFHKGCSFWNFTAFSAKNITAHKSRIAWK-LLRKIYPSNGYSGSTSVHMIAQAVSLAL 119

Query: 119 ARSYLLVPGIFAFTCG 134
           ARS  LVP IFAF CG
Sbjct: 120 ARSCFLVPSIFAFACG 135