Miyakogusa Predicted Gene

Lj0g3v0291129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291129.1 Non Characterized Hit- tr|G7L8R7|G7L8R7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,53.77,0.000000000000002,seg,NULL,CUFF.19462.1
         (98 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g088460.1 | transmembrane protein, putative | HC | chr8:36...    83   5e-17

>Medtr8g088460.1 | transmembrane protein, putative | HC |
          chr8:36662935-36664721 | 20130731
          Length = 131

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 54/66 (81%)

Query: 1  MVLNSMVVVTVARVSSEAWQWLTCIEEPLSSEQLFDLLCTFPFHQLGRIALCFCSFFCLP 60
          MVLN+ VVV VARVS++ WQWL+CI +P++S+QL DLL  FP HQLGR+ LC CSFFCLP
Sbjct: 1  MVLNTQVVVRVARVSAQTWQWLSCIHDPINSDQLLDLLFCFPLHQLGRLTLCLCSFFCLP 60

Query: 61 QAHPFY 66
          Q + FY
Sbjct: 61 QPYSFY 66