Miyakogusa Predicted Gene

Lj0g3v0291089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0291089.1 Non Characterized Hit- tr|E1ZJV9|E1ZJV9_CHLVA
Putative uncharacterized protein OS=Chlorella variabil,20.3,0.0005,no
description,FMN-binding split barrel; FMN-binding split
barrel,FMN-binding split barrel-related; ,CUFF.19459.1
         (309 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g024560.1 | hypothetical protein | HC | chr7:8093412-80993...   481   e-136

>Medtr7g024560.1 | hypothetical protein | HC | chr7:8093412-8099353
           | 20130731
          Length = 307

 Score =  481 bits (1237), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 229/306 (74%), Positives = 258/306 (84%)

Query: 1   MKRNKATVLTYAEKCKNILASNWQGSLNTIKADAKGSKESIHTSKVKYIVKRGQPYLWVP 60
           MKR+K TVLT+AEKCKNIL SNWQGSLNTIKADAKGSK  IHTSKVKYI++RGQPYLWVP
Sbjct: 1   MKRSKTTVLTFAEKCKNILTSNWQGSLNTIKADAKGSKGDIHTSKVKYILRRGQPYLWVP 60

Query: 61  EDDLHNVNTIIDERGSFAVTSPFPGPLGVLLKSLDKLPARIALSGDIRPLNEDKAKSLAE 120
           E+DLHN+NTIIDERGSFAVT PFPG LG +LKSL+KLPAR+ALSGD+ PLNEDKAK+L E
Sbjct: 61  ENDLHNMNTIIDERGSFAVTCPFPGRLGAILKSLEKLPARVALSGDVLPLNEDKAKALTE 120

Query: 121 KLQEVILSEQKAIKEFTYTXXXXXXXXXXXXXXXDNLQELLRDDEKYSVYRFKIRSCTFL 180
           K+ EVI SE+KA ++F+YT               DNLQ+LL   EKYSVYRFK RSCTF+
Sbjct: 121 KVHEVIRSEEKATRKFSYTVSGVLSSGGSSTSRSDNLQKLLEVTEKYSVYRFKTRSCTFI 180

Query: 181 DGRGGNFEVDVENLETTKADKLAPFSAKLIDGINQSEARRRALVLLCFVDMNAHAKDAYV 240
           DG GG F+V++E+L T+KAD LAPFSAKLIDGINQSEARRRALVLLCFV MN +AKDAYV
Sbjct: 181 DGHGGTFDVNIEDLGTSKADLLAPFSAKLIDGINQSEARRRALVLLCFVYMNTNAKDAYV 240

Query: 241 TSIDRKGFDVLAKVMSPVLKDGVGHYQWKEFRFMFKEEAKDVEMFCSQLVEMEEEVIYKI 300
           TS+DRKGFDVLAKV  PV KDGVG YQWKE RFMF++EA DVE FC  LV+MEEEVI K+
Sbjct: 241 TSVDRKGFDVLAKVTGPVSKDGVGQYQWKELRFMFEQEANDVETFCQHLVQMEEEVIKKV 300

Query: 301 STSSGL 306
           S SSGL
Sbjct: 301 SASSGL 306