Miyakogusa Predicted Gene

Lj0g3v0290549.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0290549.1 Non Characterized Hit- tr|Q9FIV5|Q9FIV5_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At5,34.29,0.0000000002,seg,NULL; coiled-coil,NULL,CUFF.19420.1
         (162 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g063340.1 | hypothetical protein | HC | chr3:28692864-2869...    70   7e-13

>Medtr3g063340.1 | hypothetical protein | HC |
           chr3:28692864-28692341 | 20130731
          Length = 141

 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 67/134 (50%), Gaps = 12/134 (8%)

Query: 32  YPNQYEFLKQELRTFILELQNSKHQDSELLPQNNHCNXXXXXXXXXXXXXXXXQVKKSNC 91
           YPNQ+++LK ELR+FI  LQNS +  S  LPQNN                        + 
Sbjct: 17  YPNQHDYLKHELRSFISHLQNS-YSYSHPLPQNN--------TSLTAFLDTEESTSLEHI 67

Query: 92  GGTELALEADRDVMQ--GKVDESSELESLKAVV-KEQNXXXXXXXXXXXXXXXERAQNCL 148
              +LAL    +VM+   K  E+SELES K+VV K                  E+AQNCL
Sbjct: 68  KSIQLALPEREEVMKEGKKGAENSELESPKSVVIKHCPSRRKNKRKDRVDLVLEKAQNCL 127

Query: 149 KKLQHLKTSLLSPS 162
           KK++H KTSL SPS
Sbjct: 128 KKIRHFKTSLFSPS 141