Miyakogusa Predicted Gene
- Lj0g3v0290509.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0290509.1 tr|E5GBE5|E5GBE5_CUCME Nucleotide binding protein
OS=Cucumis melo subsp. melo PE=4 SV=1,26,2e-18,no
description,WD40/YVTN repeat-like-containing domain; WD40
repeat-like,WD40-repeat-containing doma,CUFF.19429.1
(455 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g073335.1 | transducin/WD40 repeat protein | HC | chr8:311... 736 0.0
Medtr5g024210.1 | transducin/WD40 repeat protein | HC | chr5:971... 613 e-176
Medtr5g082840.1 | nucleotide-binding protein, putative | HC | ch... 112 6e-25
Medtr7g068810.1 | nucleotide-binding protein | HC | chr7:2528682... 86 1e-16
>Medtr8g073335.1 | transducin/WD40 repeat protein | HC |
chr8:31102699-31113605 | 20130731
Length = 1054
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/463 (78%), Positives = 402/463 (86%), Gaps = 15/463 (3%)
Query: 1 MGASDYASSKLLQVVLLNEHTESRTIKLGLHLSESCIDMEIISPSASADQSKQKQDLFLI 60
MG SDYASS LLQVVLLNE TESRTIKLGL LSESC+DMEI+S S++Q KQKQD FL+
Sbjct: 314 MGTSDYASSNLLQVVLLNEQTESRTIKLGLLLSESCVDMEIVS--TSSEQGKQKQDSFLL 371
Query: 61 LGKSGHLHLYDDSLIERYLLQCQSKSAPSFPKEVIVKIPLADSSITTSKFITNNPNMLLN 120
LGKSGH+HLYDD+ IERYLLQCQSKS PS PK+V K+PLADSSITT+KFITNN NM
Sbjct: 372 LGKSGHVHLYDDTFIERYLLQCQSKSTPSLPKDVTAKLPLADSSITTAKFITNNTNMFY- 430
Query: 121 SEDEYYMQLVKNHPLFAPVETNQKDGMS----KFTGFSKVQNLYITGHNNGAINFWDASC 176
S+DEYY QLVKNHPLF PVETNQKDG+S KF+GFSKVQNLYITGH+NGA+NFWDASC
Sbjct: 431 SDDEYYKQLVKNHPLFVPVETNQKDGISPSSAKFSGFSKVQNLYITGHSNGAVNFWDASC 490
Query: 177 PFFTPILQLKQQSENDFSLSGIPLTALYFDSNSPLLVSGDQSGTVRIFRFKPEPYATNSF 236
P FTPILQLKQQSENDFSLSGIPLT LYFD NSPLLVSGDQSGTVRIFRFKPEPYATN F
Sbjct: 491 PLFTPILQLKQQSENDFSLSGIPLTTLYFDINSPLLVSGDQSGTVRIFRFKPEPYATNIF 550
Query: 237 MSLTGGTKKGTDHIIQSVKLVKVNSAILSMNIDHSSMHLAVGSDQGYVSVFNLDGPTLLY 296
G+KKGTDHIIQS+K+VK+N AI+S+NIDHSS HLAVGSDQG+VSV+N+D TLLY
Sbjct: 551 ----SGSKKGTDHIIQSMKIVKINGAIISVNIDHSSKHLAVGSDQGHVSVYNMDDLTLLY 606
Query: 297 SKHIASEISSGIISLQSLTCSLNGFDKNILAVVTKDSSVLALDNETGNPLSTGTVHPKKP 356
KHI+SEIS+GIISLQ LTCSLNGFDKNIL V TKDSSVLALD+ETGN + TGTVHPKKP
Sbjct: 607 QKHISSEISAGIISLQFLTCSLNGFDKNILVVGTKDSSVLALDDETGNMMGTGTVHPKKP 666
Query: 357 AKALFMQVLGGQA----EPIAKNGVDSSEGNHIEDATTKQLYILLCSEKALYVYSLTHAV 412
+KAL MQV GQ+ I K+G+D S NHIE+ATTKQL+ILLCSEKALYVYSL HAV
Sbjct: 667 SKALLMQVFDGQSGQLIGSITKDGLDLSAANHIENATTKQLHILLCSEKALYVYSLVHAV 726
Query: 413 QGVKKVLYKKKFNSSSCCWASTFYSPSDIGLLLLFTSGKIELR 455
QGVKKVL KKKF+SSSCCWASTFY PS +GL+LLFT G++ELR
Sbjct: 727 QGVKKVLQKKKFHSSSCCWASTFYGPSGVGLVLLFTDGRVELR 769
>Medtr5g024210.1 | transducin/WD40 repeat protein | HC |
chr5:9714951-9705911 | 20130731
Length = 1108
Score = 613 bits (1582), Expect = e-176, Method: Compositional matrix adjust.
Identities = 308/459 (67%), Positives = 365/459 (79%), Gaps = 17/459 (3%)
Query: 7 ASSKLLQVVLLNEHTESRTIKLGLHLSESCIDMEIISPSASADQSKQKQDLFLILGKSGH 66
+SK +QVVLLN+HTE+RTIKLGL+LSE C+DMEIIS + +QSK KQ+ ++LGKSG
Sbjct: 378 GASKSMQVVLLNDHTETRTIKLGLYLSECCVDMEIIS--TTNEQSKHKQNSLILLGKSGR 435
Query: 67 LHLYDDSLIERYLLQCQSKSAPSFPKEVIVKIPLADSSITTSKFITNNPNMLLNSEDEYY 126
++ YDDSLIE+YLLQ QSKS PS PKEV+V++PL DS IT SKFI+N ++ + DEYY
Sbjct: 436 VYQYDDSLIEKYLLQGQSKSTPSLPKEVMVRLPLTDSGITISKFISNTTDVFY-AADEYY 494
Query: 127 MQLVKNHPLFAPVETNQKDGM----SKFTGFSKVQNLYITGHNNGAINFWDASCPFFTPI 182
Q++K++P P+ETN KDG+ + FTGFS ++NLYITGH+NGAI FWDASCPFF P+
Sbjct: 495 SQMIKSYPQLIPIETNHKDGLNLSSANFTGFSNIKNLYITGHHNGAITFWDASCPFFIPV 554
Query: 183 LQLKQQSENDFSLSGIPLTALYFDSNSPLLVSGDQSGTVRIFRFKPEPYATNSFMSLTGG 242
LQLKQQSEND SLSG+PLT LYFD S LLVSGDQSG VRIFRFKPEPYA+NSFMSLTGG
Sbjct: 555 LQLKQQSENDQSLSGVPLTELYFDIKSLLLVSGDQSGMVRIFRFKPEPYASNSFMSLTGG 614
Query: 243 TKKGTDHIIQSVKLVKVNSAILSMNIDHSSMHLAVGSDQGYVSVFNLDGPTLLYSKHIAS 302
TK ++IQSVKLVK A++ MNIDHS+ HL VGSDQG VSV N+DGP+LLY KHIAS
Sbjct: 615 TK----NVIQSVKLVKTIGAVICMNIDHSTRHLGVGSDQGNVSVINIDGPSLLYQKHIAS 670
Query: 303 EISSGIISLQSLTCSLNGFDKNILAVVTKDSSVLALDNE--TGNPLSTGTVHPKKPAKAL 360
EIS GII LQ +TCS+ GF KNIL V TKDSSVL LD+E TG V PK P+KAL
Sbjct: 671 EISVGIIYLQFITCSVYGFAKNILVVGTKDSSVLVLDSETGNTLTTGTGAVRPKNPSKAL 730
Query: 361 FMQVLGGQAEPIA----KNGVDSSEGNHIEDATTKQLYILLCSEKALYVYSLTHAVQGVK 416
FMQ+L GQ EPI K+ +D EGNH++ TTK LYILLCSEKALY+YS +A+ G+K
Sbjct: 731 FMQILDGQCEPITRSVRKDSLDLREGNHVDSVTTKNLYILLCSEKALYIYSFEYALLGIK 790
Query: 417 KVLYKKKFNSSSCCWASTFYSPSDIGLLLLFTSGKIELR 455
KVLYKKKF SSCCWASTFYS SDIGL+LLFT+GK+ELR
Sbjct: 791 KVLYKKKFFPSSCCWASTFYSASDIGLVLLFTTGKVELR 829
>Medtr5g082840.1 | nucleotide-binding protein, putative | HC |
chr5:35666377-35650795 | 20130731
Length = 1106
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 226/518 (43%), Gaps = 78/518 (15%)
Query: 2 GASDYASSKLLQVVLLNEHTESRTIK----LGLHLSESCIDMEIISPSASADQSKQKQDL 57
G ++ S ++L V+ ++ ++K + + L S DM ++ A+ D+
Sbjct: 338 GGNEIGSEEVLTVLSIDRSCGIESLKCTGRIDVALRGSFADMVLLPSDCHAEGDC---DM 394
Query: 58 FLILGKSGHLHLYDDSLIERYLLQCQSK-SAPSFPKEVIVKIPLADSSITTSKFITNNPN 116
+L G LHLYD + + + + Q K S+P+ ++ IP + +TT++ +
Sbjct: 395 LFVLTNPGQLHLYDKNYLSSLMSEKQRKTSSPTMQYAIV--IPTLEPQMTTARLDVVCQD 452
Query: 117 MLLNSEDEYYMQLVKNHPLFAPVETNQKDGMSKFTGFSKVQ-----------NLYITGHN 165
+ + + K H + NQ+ K+ V +YI G+
Sbjct: 453 VKSFTALSEILVAAKQHSV-----QNQRSAEIKWPLVGGVPGQILKEDHLFVQIYIAGYQ 507
Query: 166 NGAINFWDASCPFFTPILQLKQQSENDFSL--SGIPLTALYFDSNSPLLVSGDQSGTVRI 223
+G+ WDASCP + + +K + ND + + ++AL F NS L GD+SG VR+
Sbjct: 508 DGSARIWDASCPALSLVYNIKPEV-NDVKMGSASFAVSALDFCPNSLHLAVGDESGVVRL 566
Query: 224 FRFKPEPYATNSFMSLTGGTK-----KGTDHIIQSVKLVKVNSAILSMNIDHSSMHLAVG 278
+ + N GT+ +G ++V ++ NSA+ + + L VG
Sbjct: 567 YGLRRSSDDINLHFVTENGTEVHNVNQGDGPHCKAVFSLQ-NSAVCGLQFANLGGKLVVG 625
Query: 279 SDQGYVSVFNLDGPTLLYSKHIASEISSGIISLQSL---TCSLN-----------GFDKN 324
+ G V++ + ++L+ A +S ++S+ + T SLN K
Sbjct: 626 YEHGQVAMLDTITSSILFLTS-AESPTSAVVSMNAKFLDTSSLNIPQESVSDISDNSAKG 684
Query: 325 ILAVVTKDSSVLALDNETGNPLSTGTVHPKKPAKALFMQVLGGQAEPIAK-------NGV 377
++ ++T+D+ ++A+D ETGN + T+ P+ + A+ M ++ G +E A+
Sbjct: 685 LVFIMTRDAHLVAIDTETGNMVCNRTMSPRVNSNAISMHIIDGTSEISAEKLQSHSPQQN 744
Query: 378 DSSEGNHIEDATTKQLY-------------------ILLCSEKALYVYSLTHAVQGVKKV 418
DS +I+ T+ + +LLC E L ++SL ++G K
Sbjct: 745 DSGTQANIQSENTQDIVETITTIENSYFEQIVLNSLVLLCYESELSLHSLNIVIEGSNKY 804
Query: 419 LYKKKFNSSSCCWASTFY-SPSDIGLLLLFTSGKIELR 455
+ K CCW +TF + L++L+ +G IELR
Sbjct: 805 IRKVTL-VKECCWTTTFRKDDKECVLVVLYQTGDIELR 841
>Medtr7g068810.1 | nucleotide-binding protein | HC |
chr7:25286828-25277493 | 20130731
Length = 1120
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 229/528 (43%), Gaps = 89/528 (16%)
Query: 2 GASDYASSKLLQVVLLNEHTESRTIKL----GLHLSESCIDMEIISPSASADQSKQKQDL 57
G + S ++L V+ L + ++K L L+ + D+ I+ PS A K DL
Sbjct: 338 GGDEIGSDEVLTVLTLEWSSGMESLKCIGRADLTLNGTFADL-ILLPSIGARGLNSKDDL 396
Query: 58 FLILGKSGHLHLYD-DSLIERYLLQCQSKSAPSFPKEVIVKIPLADSSITTSKFITNNPN 116
F +L G +H YD DSL L+ Q++++ +E V IP+ + S+T +K I P+
Sbjct: 397 F-VLTNPGQIHYYDNDSL--SALMSEQNRTSSVSAQEFPVLIPMNNPSLTVAKLI-KLPS 452
Query: 117 MLLNSEDEYYMQLV------------KNHPLFAPVETNQKDGMSKFTGFSKVQNLYITGH 164
L +S+ + V N PL V ++ M K G +V Y G+
Sbjct: 453 QLNSSKTLAEVAAVLKTSSTPGSASCSNWPLTGGVPSHLS--MVKGAGIERV---YFVGY 507
Query: 165 NNGAINFWDASCPFFTPILQLKQQSENDFSLSGI--PLTALYFDSNSPLLVSGDQSGTVR 222
+NG++ DA+ P + I ++ + N ++G+ P+T L F S S LL G++ G VR
Sbjct: 508 SNGSVLLCDATHPILSYICYIEGEV-NGVKVAGLNAPVTKLDFFSASLLLAVGNECGLVR 566
Query: 223 IFRFK------PEPYATNSFMSLTGGTKKGTDHIIQSVKLVKVNSAILSMNIDHSSMHLA 276
++ K + T + + + H L+ +S + +++ +S LA
Sbjct: 567 VYDLKDCSDRKKFQFVTETKNEVHDAPQGKGPHFSAVFSLL--DSPVQALSFANSGTKLA 624
Query: 277 VGSDQGYVSVFNLDGPTLLYSKHIASEISSGIISL--QSLTCSLNGFD------------ 322
+G G V V ++ ++L+ SS I SL + C + +
Sbjct: 625 IGFLSGRVGVCDMKSLSVLFLIDGVPSSSSPITSLVWKQQACFQSAVNSPRKPETPSGNS 684
Query: 323 -KNILAVVTKDSSVLALDNETGNPLSTGTVHPKKPAKALFMQVLGGQ------------- 368
+ IL +++ D + ++ +TG +S +H K+ + A+ M ++
Sbjct: 685 HEEILFILSSDGKISVVEGDTGKTVSNRPLHLKE-STAISMYIIDDSITTSEVSNDKQHE 743
Query: 369 -----------AEPIAKN---GVDSSEGNHI--EDATTKQLY----ILLCSEKALYVYSL 408
EP+ ++ V+SSE H E A + ++ +LLC E +L++ S
Sbjct: 744 EPLKTTAEVRPEEPVQESSSTAVNSSEAEHFSSETAHSGDIHLDPLVLLCCENSLHLLSA 803
Query: 409 THAVQGVKKVLYKKKFNSSSCCWASTFYSPSDI-GLLLLFTSGKIELR 455
+QG KK + K + +S SC W + G+L L +G E+R
Sbjct: 804 KALIQGNKKPIRKVE-HSKSCYWTTILKKDEKFCGILSLLQTGTFEIR 850