Miyakogusa Predicted Gene

Lj0g3v0290509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0290509.1 tr|E5GBE5|E5GBE5_CUCME Nucleotide binding protein
OS=Cucumis melo subsp. melo PE=4 SV=1,26,2e-18,no
description,WD40/YVTN repeat-like-containing domain; WD40
repeat-like,WD40-repeat-containing doma,CUFF.19429.1
         (455 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g073335.1 | transducin/WD40 repeat protein | HC | chr8:311...   736   0.0  
Medtr5g024210.1 | transducin/WD40 repeat protein | HC | chr5:971...   613   e-176
Medtr5g082840.1 | nucleotide-binding protein, putative | HC | ch...   112   6e-25
Medtr7g068810.1 | nucleotide-binding protein | HC | chr7:2528682...    86   1e-16

>Medtr8g073335.1 | transducin/WD40 repeat protein | HC |
           chr8:31102699-31113605 | 20130731
          Length = 1054

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/463 (78%), Positives = 402/463 (86%), Gaps = 15/463 (3%)

Query: 1   MGASDYASSKLLQVVLLNEHTESRTIKLGLHLSESCIDMEIISPSASADQSKQKQDLFLI 60
           MG SDYASS LLQVVLLNE TESRTIKLGL LSESC+DMEI+S   S++Q KQKQD FL+
Sbjct: 314 MGTSDYASSNLLQVVLLNEQTESRTIKLGLLLSESCVDMEIVS--TSSEQGKQKQDSFLL 371

Query: 61  LGKSGHLHLYDDSLIERYLLQCQSKSAPSFPKEVIVKIPLADSSITTSKFITNNPNMLLN 120
           LGKSGH+HLYDD+ IERYLLQCQSKS PS PK+V  K+PLADSSITT+KFITNN NM   
Sbjct: 372 LGKSGHVHLYDDTFIERYLLQCQSKSTPSLPKDVTAKLPLADSSITTAKFITNNTNMFY- 430

Query: 121 SEDEYYMQLVKNHPLFAPVETNQKDGMS----KFTGFSKVQNLYITGHNNGAINFWDASC 176
           S+DEYY QLVKNHPLF PVETNQKDG+S    KF+GFSKVQNLYITGH+NGA+NFWDASC
Sbjct: 431 SDDEYYKQLVKNHPLFVPVETNQKDGISPSSAKFSGFSKVQNLYITGHSNGAVNFWDASC 490

Query: 177 PFFTPILQLKQQSENDFSLSGIPLTALYFDSNSPLLVSGDQSGTVRIFRFKPEPYATNSF 236
           P FTPILQLKQQSENDFSLSGIPLT LYFD NSPLLVSGDQSGTVRIFRFKPEPYATN F
Sbjct: 491 PLFTPILQLKQQSENDFSLSGIPLTTLYFDINSPLLVSGDQSGTVRIFRFKPEPYATNIF 550

Query: 237 MSLTGGTKKGTDHIIQSVKLVKVNSAILSMNIDHSSMHLAVGSDQGYVSVFNLDGPTLLY 296
                G+KKGTDHIIQS+K+VK+N AI+S+NIDHSS HLAVGSDQG+VSV+N+D  TLLY
Sbjct: 551 ----SGSKKGTDHIIQSMKIVKINGAIISVNIDHSSKHLAVGSDQGHVSVYNMDDLTLLY 606

Query: 297 SKHIASEISSGIISLQSLTCSLNGFDKNILAVVTKDSSVLALDNETGNPLSTGTVHPKKP 356
            KHI+SEIS+GIISLQ LTCSLNGFDKNIL V TKDSSVLALD+ETGN + TGTVHPKKP
Sbjct: 607 QKHISSEISAGIISLQFLTCSLNGFDKNILVVGTKDSSVLALDDETGNMMGTGTVHPKKP 666

Query: 357 AKALFMQVLGGQA----EPIAKNGVDSSEGNHIEDATTKQLYILLCSEKALYVYSLTHAV 412
           +KAL MQV  GQ+      I K+G+D S  NHIE+ATTKQL+ILLCSEKALYVYSL HAV
Sbjct: 667 SKALLMQVFDGQSGQLIGSITKDGLDLSAANHIENATTKQLHILLCSEKALYVYSLVHAV 726

Query: 413 QGVKKVLYKKKFNSSSCCWASTFYSPSDIGLLLLFTSGKIELR 455
           QGVKKVL KKKF+SSSCCWASTFY PS +GL+LLFT G++ELR
Sbjct: 727 QGVKKVLQKKKFHSSSCCWASTFYGPSGVGLVLLFTDGRVELR 769


>Medtr5g024210.1 | transducin/WD40 repeat protein | HC |
           chr5:9714951-9705911 | 20130731
          Length = 1108

 Score =  613 bits (1582), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 308/459 (67%), Positives = 365/459 (79%), Gaps = 17/459 (3%)

Query: 7   ASSKLLQVVLLNEHTESRTIKLGLHLSESCIDMEIISPSASADQSKQKQDLFLILGKSGH 66
            +SK +QVVLLN+HTE+RTIKLGL+LSE C+DMEIIS   + +QSK KQ+  ++LGKSG 
Sbjct: 378 GASKSMQVVLLNDHTETRTIKLGLYLSECCVDMEIIS--TTNEQSKHKQNSLILLGKSGR 435

Query: 67  LHLYDDSLIERYLLQCQSKSAPSFPKEVIVKIPLADSSITTSKFITNNPNMLLNSEDEYY 126
           ++ YDDSLIE+YLLQ QSKS PS PKEV+V++PL DS IT SKFI+N  ++   + DEYY
Sbjct: 436 VYQYDDSLIEKYLLQGQSKSTPSLPKEVMVRLPLTDSGITISKFISNTTDVFY-AADEYY 494

Query: 127 MQLVKNHPLFAPVETNQKDGM----SKFTGFSKVQNLYITGHNNGAINFWDASCPFFTPI 182
            Q++K++P   P+ETN KDG+    + FTGFS ++NLYITGH+NGAI FWDASCPFF P+
Sbjct: 495 SQMIKSYPQLIPIETNHKDGLNLSSANFTGFSNIKNLYITGHHNGAITFWDASCPFFIPV 554

Query: 183 LQLKQQSENDFSLSGIPLTALYFDSNSPLLVSGDQSGTVRIFRFKPEPYATNSFMSLTGG 242
           LQLKQQSEND SLSG+PLT LYFD  S LLVSGDQSG VRIFRFKPEPYA+NSFMSLTGG
Sbjct: 555 LQLKQQSENDQSLSGVPLTELYFDIKSLLLVSGDQSGMVRIFRFKPEPYASNSFMSLTGG 614

Query: 243 TKKGTDHIIQSVKLVKVNSAILSMNIDHSSMHLAVGSDQGYVSVFNLDGPTLLYSKHIAS 302
           TK    ++IQSVKLVK   A++ MNIDHS+ HL VGSDQG VSV N+DGP+LLY KHIAS
Sbjct: 615 TK----NVIQSVKLVKTIGAVICMNIDHSTRHLGVGSDQGNVSVINIDGPSLLYQKHIAS 670

Query: 303 EISSGIISLQSLTCSLNGFDKNILAVVTKDSSVLALDNE--TGNPLSTGTVHPKKPAKAL 360
           EIS GII LQ +TCS+ GF KNIL V TKDSSVL LD+E        TG V PK P+KAL
Sbjct: 671 EISVGIIYLQFITCSVYGFAKNILVVGTKDSSVLVLDSETGNTLTTGTGAVRPKNPSKAL 730

Query: 361 FMQVLGGQAEPIA----KNGVDSSEGNHIEDATTKQLYILLCSEKALYVYSLTHAVQGVK 416
           FMQ+L GQ EPI     K+ +D  EGNH++  TTK LYILLCSEKALY+YS  +A+ G+K
Sbjct: 731 FMQILDGQCEPITRSVRKDSLDLREGNHVDSVTTKNLYILLCSEKALYIYSFEYALLGIK 790

Query: 417 KVLYKKKFNSSSCCWASTFYSPSDIGLLLLFTSGKIELR 455
           KVLYKKKF  SSCCWASTFYS SDIGL+LLFT+GK+ELR
Sbjct: 791 KVLYKKKFFPSSCCWASTFYSASDIGLVLLFTTGKVELR 829


>Medtr5g082840.1 | nucleotide-binding protein, putative | HC |
           chr5:35666377-35650795 | 20130731
          Length = 1106

 Score =  112 bits (281), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 120/518 (23%), Positives = 226/518 (43%), Gaps = 78/518 (15%)

Query: 2   GASDYASSKLLQVVLLNEHTESRTIK----LGLHLSESCIDMEIISPSASADQSKQKQDL 57
           G ++  S ++L V+ ++      ++K    + + L  S  DM ++     A+      D+
Sbjct: 338 GGNEIGSEEVLTVLSIDRSCGIESLKCTGRIDVALRGSFADMVLLPSDCHAEGDC---DM 394

Query: 58  FLILGKSGHLHLYDDSLIERYLLQCQSK-SAPSFPKEVIVKIPLADSSITTSKFITNNPN 116
             +L   G LHLYD + +   + + Q K S+P+    ++  IP  +  +TT++      +
Sbjct: 395 LFVLTNPGQLHLYDKNYLSSLMSEKQRKTSSPTMQYAIV--IPTLEPQMTTARLDVVCQD 452

Query: 117 MLLNSEDEYYMQLVKNHPLFAPVETNQKDGMSKFTGFSKVQ-----------NLYITGHN 165
           +   +     +   K H +      NQ+    K+     V             +YI G+ 
Sbjct: 453 VKSFTALSEILVAAKQHSV-----QNQRSAEIKWPLVGGVPGQILKEDHLFVQIYIAGYQ 507

Query: 166 NGAINFWDASCPFFTPILQLKQQSENDFSL--SGIPLTALYFDSNSPLLVSGDQSGTVRI 223
           +G+   WDASCP  + +  +K +  ND  +  +   ++AL F  NS  L  GD+SG VR+
Sbjct: 508 DGSARIWDASCPALSLVYNIKPEV-NDVKMGSASFAVSALDFCPNSLHLAVGDESGVVRL 566

Query: 224 FRFKPEPYATNSFMSLTGGTK-----KGTDHIIQSVKLVKVNSAILSMNIDHSSMHLAVG 278
           +  +      N       GT+     +G     ++V  ++ NSA+  +   +    L VG
Sbjct: 567 YGLRRSSDDINLHFVTENGTEVHNVNQGDGPHCKAVFSLQ-NSAVCGLQFANLGGKLVVG 625

Query: 279 SDQGYVSVFNLDGPTLLYSKHIASEISSGIISLQSL---TCSLN-----------GFDKN 324
            + G V++ +    ++L+    A   +S ++S+ +    T SLN              K 
Sbjct: 626 YEHGQVAMLDTITSSILFLTS-AESPTSAVVSMNAKFLDTSSLNIPQESVSDISDNSAKG 684

Query: 325 ILAVVTKDSSVLALDNETGNPLSTGTVHPKKPAKALFMQVLGGQAEPIAK-------NGV 377
           ++ ++T+D+ ++A+D ETGN +   T+ P+  + A+ M ++ G +E  A+          
Sbjct: 685 LVFIMTRDAHLVAIDTETGNMVCNRTMSPRVNSNAISMHIIDGTSEISAEKLQSHSPQQN 744

Query: 378 DSSEGNHIEDATTKQLY-------------------ILLCSEKALYVYSLTHAVQGVKKV 418
           DS    +I+   T+ +                    +LLC E  L ++SL   ++G  K 
Sbjct: 745 DSGTQANIQSENTQDIVETITTIENSYFEQIVLNSLVLLCYESELSLHSLNIVIEGSNKY 804

Query: 419 LYKKKFNSSSCCWASTFY-SPSDIGLLLLFTSGKIELR 455
           + K       CCW +TF     +  L++L+ +G IELR
Sbjct: 805 IRKVTL-VKECCWTTTFRKDDKECVLVVLYQTGDIELR 841


>Medtr7g068810.1 | nucleotide-binding protein | HC |
           chr7:25286828-25277493 | 20130731
          Length = 1120

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 229/528 (43%), Gaps = 89/528 (16%)

Query: 2   GASDYASSKLLQVVLLNEHTESRTIKL----GLHLSESCIDMEIISPSASADQSKQKQDL 57
           G  +  S ++L V+ L   +   ++K      L L+ +  D+ I+ PS  A     K DL
Sbjct: 338 GGDEIGSDEVLTVLTLEWSSGMESLKCIGRADLTLNGTFADL-ILLPSIGARGLNSKDDL 396

Query: 58  FLILGKSGHLHLYD-DSLIERYLLQCQSKSAPSFPKEVIVKIPLADSSITTSKFITNNPN 116
           F +L   G +H YD DSL    L+  Q++++    +E  V IP+ + S+T +K I   P+
Sbjct: 397 F-VLTNPGQIHYYDNDSL--SALMSEQNRTSSVSAQEFPVLIPMNNPSLTVAKLI-KLPS 452

Query: 117 MLLNSEDEYYMQLV------------KNHPLFAPVETNQKDGMSKFTGFSKVQNLYITGH 164
            L +S+    +  V             N PL   V ++    M K  G  +V   Y  G+
Sbjct: 453 QLNSSKTLAEVAAVLKTSSTPGSASCSNWPLTGGVPSHLS--MVKGAGIERV---YFVGY 507

Query: 165 NNGAINFWDASCPFFTPILQLKQQSENDFSLSGI--PLTALYFDSNSPLLVSGDQSGTVR 222
           +NG++   DA+ P  + I  ++ +  N   ++G+  P+T L F S S LL  G++ G VR
Sbjct: 508 SNGSVLLCDATHPILSYICYIEGEV-NGVKVAGLNAPVTKLDFFSASLLLAVGNECGLVR 566

Query: 223 IFRFK------PEPYATNSFMSLTGGTKKGTDHIIQSVKLVKVNSAILSMNIDHSSMHLA 276
           ++  K         + T +   +    +    H      L+  +S + +++  +S   LA
Sbjct: 567 VYDLKDCSDRKKFQFVTETKNEVHDAPQGKGPHFSAVFSLL--DSPVQALSFANSGTKLA 624

Query: 277 VGSDQGYVSVFNLDGPTLLYSKHIASEISSGIISL--QSLTCSLNGFD------------ 322
           +G   G V V ++   ++L+        SS I SL  +   C  +  +            
Sbjct: 625 IGFLSGRVGVCDMKSLSVLFLIDGVPSSSSPITSLVWKQQACFQSAVNSPRKPETPSGNS 684

Query: 323 -KNILAVVTKDSSVLALDNETGNPLSTGTVHPKKPAKALFMQVLGGQ------------- 368
            + IL +++ D  +  ++ +TG  +S   +H K+ + A+ M ++                
Sbjct: 685 HEEILFILSSDGKISVVEGDTGKTVSNRPLHLKE-STAISMYIIDDSITTSEVSNDKQHE 743

Query: 369 -----------AEPIAKN---GVDSSEGNHI--EDATTKQLY----ILLCSEKALYVYSL 408
                       EP+ ++    V+SSE  H   E A +  ++    +LLC E +L++ S 
Sbjct: 744 EPLKTTAEVRPEEPVQESSSTAVNSSEAEHFSSETAHSGDIHLDPLVLLCCENSLHLLSA 803

Query: 409 THAVQGVKKVLYKKKFNSSSCCWASTFYSPSDI-GLLLLFTSGKIELR 455
              +QG KK + K + +S SC W +         G+L L  +G  E+R
Sbjct: 804 KALIQGNKKPIRKVE-HSKSCYWTTILKKDEKFCGILSLLQTGTFEIR 850