Miyakogusa Predicted Gene
- Lj0g3v0290239.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0290239.1 Non Characterized Hit- tr|I1KW50|I1KW50_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,80.49,0,Cyclin-like,Cyclin-like; Cyclin_N,Cyclin, N-terminal;
Cyclin_C,Cyclin, C-terminal; no description,Cy,CUFF.19391.1
(673 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g088980.1 | carboxy-terminal domain cyclin | HC | chr5:386... 261 2e-69
Medtr5g023790.1 | carboxy-terminal domain cyclin | HC | chr5:947... 251 1e-66
Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731 243 3e-64
Medtr8g074000.1 | carboxy-terminal domain cyclin | HC | chr8:312... 241 2e-63
Medtr5g023790.3 | carboxy-terminal domain cyclin | HC | chr5:947... 218 1e-56
Medtr1g011470.1 | carboxy-terminal domain cyclin | HC | chr1:203... 204 3e-52
Medtr3g107970.1 | carboxy-terminal domain cyclin | HC | chr3:498... 196 8e-50
Medtr3g088415.1 | carboxy-terminal domain cyclin | HC | chr3:401... 183 6e-46
Medtr2g102520.1 | carboxy-terminal domain cyclin | HC | chr2:441... 182 7e-46
Medtr2g102550.1 | carboxy-terminal domain cyclin | HC | chr2:441... 175 2e-43
Medtr3g088405.1 | carboxy-terminal domain cyclin | HC | chr3:401... 168 1e-41
Medtr5g023790.2 | carboxy-terminal domain cyclin | HC | chr5:947... 167 5e-41
Medtr3g088415.2 | carboxy-terminal domain cyclin | HC | chr3:401... 160 5e-39
Medtr3g102510.1 | carboxy-terminal domain cyclin | HC | chr3:472... 153 4e-37
Medtr3g102520.1 | carboxy-terminal domain cyclin | HC | chr3:472... 148 2e-35
Medtr1g018680.1 | carboxy-terminal domain cyclin | HC | chr1:543... 147 3e-35
Medtr3g061680.1 | carboxy-terminal domain cyclin | LC | chr3:246... 144 2e-34
Medtr3g060770.1 | carboxy-terminal domain cyclin | LC | chr3:241... 144 3e-34
Medtr3g060820.1 | carboxy-terminal domain cyclin | LC | chr3:241... 143 4e-34
Medtr3g102530.1 | carboxy-terminal domain cyclin | HC | chr3:472... 142 9e-34
Medtr3g460990.1 | carboxy-terminal domain cyclin | LC | chr3:240... 138 2e-32
Medtr3g060400.1 | carboxy-terminal domain cyclin | LC | chr3:236... 138 2e-32
Medtr3g102540.1 | carboxy-terminal domain cyclin | LC | chr3:472... 137 4e-32
Medtr3g060410.1 | carboxy-terminal domain cyclin | LC | chr3:236... 136 9e-32
Medtr3g088415.3 | carboxy-terminal domain cyclin | HC | chr3:401... 134 3e-31
Medtr3g102560.1 | carboxy-terminal domain cyclin | HC | chr3:472... 133 6e-31
Medtr6g045270.1 | carboxy-terminal domain cyclin | LC | chr6:113... 117 4e-26
Medtr5g011900.1 | amine-terminal domain cyclin | LC | chr5:35020... 83 8e-16
Medtr1g032850.1 | carboxy-terminal domain cyclin | HC | chr1:117... 80 9e-15
Medtr5g044040.1 | amine-terminal domain cyclin | LC | chr5:19364... 65 2e-10
Medtr2g005960.1 | amine-terminal domain cyclin | LC | chr2:40294... 65 3e-10
Medtr3g100710.1 | carboxy-terminal domain cyclin | HC | chr3:463... 55 2e-07
Medtr8g063120.1 | carboxy-terminal domain cyclin | HC | chr8:264... 53 1e-06
Medtr2g011500.1 | carboxy-terminal domain cyclin | HC | chr2:280... 52 2e-06
Medtr8g063120.2 | carboxy-terminal domain cyclin | HC | chr8:264... 52 3e-06
Medtr5g065830.1 | carboxy-terminal domain cyclin | LC | chr5:277... 51 3e-06
Medtr5g035360.1 | carboxy-terminal domain cyclin | HC | chr5:153... 51 4e-06
>Medtr5g088980.1 | carboxy-terminal domain cyclin | HC |
chr5:38636983-38633820 | 20130731
Length = 421
Score = 261 bits (667), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 202/305 (66%), Gaps = 9/305 (2%)
Query: 370 RKKSTRR--KSYTTSLIERSKFLKESGEVKEQDNLPNID--NECNQLEVSEYIDDIYQYY 425
R++ST++ K++++ L RSK + V +D + NID ++ N+L +EYIDDIY+YY
Sbjct: 117 RERSTKKIVKTFSSVLSARSK---AACRVVPKDFVENIDASDKENELAATEYIDDIYKYY 173
Query: 426 WVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPETLYLTITLLDQYLSQV 485
++E + +YM+ Q DI +MR IL++WLIEVH K++LMPET YLT+ ++D++LS
Sbjct: 174 KLSED-DVRVHDYMASQPDINVKMRAILIDWLIEVHRKFELMPETFYLTLNIVDRFLSTK 232
Query: 486 TIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGMEKLVLRKLNFRL 545
+ + ++QLVG++++L+ASKYE+ W P V D + IS +Y R+Q+L MEK +LR L + L
Sbjct: 233 AVPRKELQLVGISSMLIASKYEEIWAPEVNDFVCISDNAYVREQVLVMEKTILRNLEWYL 292
Query: 546 NCPTPYVFLVRFLKAAQTVDKKLEHMAFFLIELCLVEYEAL-AFKPSLLCASALYVARCT 604
PTPYVFLVR++KA+ DK++E M FL EL ++ Y + ++ PS++ ASA+Y AR T
Sbjct: 293 TVPTPYVFLVRYIKASTPSDKEMESMVNFLAELSMMHYATVSSYCPSMIAASAVYAARST 352
Query: 605 LQITPPWTPLLRKHTRYEASQIRGCADMILRFHKAAGVGKLTVTYEKYSRQEFSGVAAVK 664
L+ +P WT L+ +T Y Q+R CA ++ FH AA +L Y+K+ + VA +
Sbjct: 353 LERSPFWTDTLKHYTGYSEEQLRDCAKLMASFHSAAPESRLRAIYKKFCSSDRCAVALMT 412
Query: 665 PLDRL 669
P L
Sbjct: 413 PAKNL 417
>Medtr5g023790.1 | carboxy-terminal domain cyclin | HC |
chr5:9472333-9468437 | 20130731
Length = 428
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 169/254 (66%), Gaps = 1/254 (0%)
Query: 412 LEVSEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPETL 471
L V+EYI+D+Y YY E+ NYM+ Q DI +MR ILV+WLIEVH K+DLM ETL
Sbjct: 167 LAVAEYIEDLYSYYRKVESTGCVSPNYMAQQFDINERMRAILVDWLIEVHDKFDLMHETL 226
Query: 472 YLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQML 531
+LT+ L+D++L + ++ + +QLVGL +LLA KYE+ P V DL+ IS +YTR ++L
Sbjct: 227 FLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYTRKEVL 286
Query: 532 GMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTVDKKLEHMAFFLIELCLVEYEALAFKPS 591
MEK+++ L F ++ PT YVF+ RFLKAAQ D+KLE +AFFLIEL LVEY L F PS
Sbjct: 287 EMEKVMVNALKFNISVPTAYVFMRRFLKAAQA-DRKLELLAFFLIELSLVEYAMLKFPPS 345
Query: 592 LLCASALYVARCTLQITPPWTPLLRKHTRYEASQIRGCADMILRFHKAAGVGKLTVTYEK 651
L A+A+Y A+CT+ W+ HT Y Q+ C+ +++ FHK AG GKLT + K
Sbjct: 346 QLAAAAVYTAQCTMYGVKQWSKTCEWHTNYSEDQLLECSSLMVDFHKKAGTGKLTGAHRK 405
Query: 652 YSRQEFSGVAAVKP 665
Y +FS A +P
Sbjct: 406 YGTSKFSYTAKCEP 419
>Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731
Length = 1318
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/268 (45%), Positives = 173/268 (64%), Gaps = 6/268 (2%)
Query: 410 NQLEVSEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPE 469
N+L EY++DIY++Y + E S +YM Q +I +MRGIL++WL++VH K++L PE
Sbjct: 192 NELAAVEYLEDIYKFYKIVENESRP-HDYMDSQPEINERMRGILIDWLVDVHSKFELSPE 250
Query: 470 TLYLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQ 529
TLYLTI ++D++L+ + + ++QLVG++ +L+ASKYE+ W P V D + +S +Y+ +Q
Sbjct: 251 TLYLTINIVDRFLAVNLVSRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYSHEQ 310
Query: 530 MLGMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTV-----DKKLEHMAFFLIELCLVEYE 584
+L MEK +L KL + L PTP+VFLVRF+KAA LE MA FL EL ++ Y
Sbjct: 311 ILIMEKTILGKLEWTLTVPTPFVFLVRFIKAASVSAVPSDQGDLEMMAHFLSELGMMHYA 370
Query: 585 ALAFKPSLLCASALYVARCTLQITPPWTPLLRKHTRYEASQIRGCADMILRFHKAAGVGK 644
L + PS+L ASA+Y AR TL TP W L+ HT Y Q+ CA +++ FH A GK
Sbjct: 371 TLRYCPSMLAASAVYAARSTLSKTPVWNETLKMHTGYSEEQLMDCARLLVSFHSGAENGK 430
Query: 645 LTVTYEKYSRQEFSGVAAVKPLDRLPLP 672
L V Y+KYS + VAA+ P L LP
Sbjct: 431 LKVVYKKYSDPQKGAVAALPPAKNLLLP 458
>Medtr8g074000.1 | carboxy-terminal domain cyclin | HC |
chr8:31292669-31296642 | 20130731
Length = 434
Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/256 (47%), Positives = 165/256 (64%), Gaps = 1/256 (0%)
Query: 410 NQLEVSEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPE 469
N L V EYI+D++ YY E YM Q D+ +MR ILV+WLIEVH K+DLM E
Sbjct: 169 NSLAVVEYIEDLHAYYRKIEYLGCVSPAYMDEQLDLNERMRAILVDWLIEVHDKFDLMQE 228
Query: 470 TLYLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQ 529
TL+LT+ L+D++L++ + + +QLVGL +LLA KYE+ P V DL+ I+ +YTR
Sbjct: 229 TLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLIHIADRAYTRKD 288
Query: 530 MLGMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTVDKKLEHMAFFLIELCLVEYEALAFK 589
+L MEK +L L + ++ PT YVF+ RFLKAAQ DKKLE +AFFL+EL LVEYE L F
Sbjct: 289 ILEMEKSMLNTLQYNMSLPTAYVFMRRFLKAAQA-DKKLELVAFFLVELSLVEYEMLKFP 347
Query: 590 PSLLCASALYVARCTLQITPPWTPLLRKHTRYEASQIRGCADMILRFHKAAGVGKLTVTY 649
PSL+ A+A+Y A+CT+ W HT Y Q+ C+ +++ FH+ AG GKLT +
Sbjct: 348 PSLVAAAAVYTAQCTVSGFKHWNKTCEWHTNYSEDQLLECSMLMVGFHQKAGAGKLTGVH 407
Query: 650 EKYSRQEFSGVAAVKP 665
KY +FS A +P
Sbjct: 408 RKYGSAKFSFTAKCEP 423
>Medtr5g023790.3 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468202 | 20130731
Length = 381
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 146/215 (67%), Gaps = 1/215 (0%)
Query: 412 LEVSEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPETL 471
L V+EYI+D+Y YY E+ NYM+ Q DI +MR ILV+WLIEVH K+DLM ETL
Sbjct: 167 LAVAEYIEDLYSYYRKVESTGCVSPNYMAQQFDINERMRAILVDWLIEVHDKFDLMHETL 226
Query: 472 YLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQML 531
+LT+ L+D++L + ++ + +QLVGL +LLA KYE+ P V DL+ IS +YTR ++L
Sbjct: 227 FLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYTRKEVL 286
Query: 532 GMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTVDKKLEHMAFFLIELCLVEYEALAFKPS 591
MEK+++ L F ++ PT YVF+ RFLKAAQ D+KLE +AFFLIEL LVEY L F PS
Sbjct: 287 EMEKVMVNALKFNISVPTAYVFMRRFLKAAQA-DRKLELLAFFLIELSLVEYAMLKFPPS 345
Query: 592 LLCASALYVARCTLQITPPWTPLLRKHTRYEASQI 626
L A+A+Y A+CT+ W+ HT Y Q+
Sbjct: 346 QLAAAAVYTAQCTMYGVKQWSKTCEWHTNYSEDQL 380
>Medtr1g011470.1 | carboxy-terminal domain cyclin | HC |
chr1:2038488-2033308 | 20130731
Length = 422
Score = 204 bits (519), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 158/255 (61%), Gaps = 6/255 (2%)
Query: 417 YIDDIYQYYWVTEAYSPTLANYM-SIQTDITPQMRGILVNWLIEVHFKYDLMPETLYLTI 475
Y DIY V E LANYM ++Q DITP MRGILV+WL+EV ++ L+P+TLYL +
Sbjct: 161 YAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEVADEFKLVPDTLYLAV 220
Query: 476 TLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGMEK 535
L+D++LSQ I K +QL+G+T +L++SKYE+ P V+D I+ +Y+R ++L MEK
Sbjct: 221 NLIDRFLSQRLITKRRLQLLGITCMLISSKYEEICAPGVEDFCVITDNTYSRQEVLKMEK 280
Query: 536 LVLRKLNFRLNCPTPYVFLVRFLKAAQTVDK----KLEHMAFFLIELCLVEYEALAFKPS 591
VL L+F+L PT FL RF++ AQT K LE +A +L EL LVEY L F+PS
Sbjct: 281 EVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYLAELALVEYSFLQFQPS 340
Query: 592 LLCASALYVARCTL-QITPPWTPLLRKHTRYEASQIRGCADMILRFHKAAGVGKLTVTYE 650
+ AS++ +AR TL Q PW P L +T Y+AS+++ ++ +L E
Sbjct: 341 KIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLELIDLQLNTKRCRLNAVRE 400
Query: 651 KYSRQEFSGVAAVKP 665
KY Q+F+ VA + P
Sbjct: 401 KYQHQKFNSVANLSP 415
>Medtr3g107970.1 | carboxy-terminal domain cyclin | HC |
chr3:49887211-49892757 | 20130731
Length = 478
Score = 196 bits (497), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 107/257 (41%), Positives = 159/257 (61%), Gaps = 6/257 (2%)
Query: 415 SEYIDDIYQYYWVTEAYSPTLANYMS-IQTDITPQMRGILVNWLIEVHFKYDLMPETLYL 473
S Y DIY V+E NYM +Q DI+P MRGIL++WL+EV +Y L+P+TLYL
Sbjct: 211 SAYAPDIYTKVRVSELEKRPSTNYMEKLQQDISPSMRGILIDWLVEVSEEYKLVPDTLYL 270
Query: 474 TITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGM 533
T+ L+D++LS I+K +QL+G+T + +ASKYE+ PRV++ I+ +YT+++++ M
Sbjct: 271 TVNLIDRFLSTSLIQKHRLQLLGVTCMFIASKYEEMCAPRVEEFCFITDNTYTKEEVVKM 330
Query: 534 EKLVLRKLNFRLNCPTPYVFLVRFLKAAQTVDK----KLEHMAFFLIELCLVEYEALAFK 589
EK VL L F+L+ PT F+ RF++AAQ+ K +LE +A +L EL LVEY L F
Sbjct: 331 EKEVLNLLRFQLSVPTTKTFIRRFIQAAQSSYKVPLAELEFLANYLAELTLVEYSFLQFL 390
Query: 590 PSLLCASALYVARCTLQITP-PWTPLLRKHTRYEASQIRGCADMILRFHKAAGVGKLTVT 648
PS + ASA+++AR TL + PWT L T Y+AS+++ + L
Sbjct: 391 PSRVAASAVFLARWTLNHSEHPWTTTLEHFTNYKASELKPVVLALEDLQLNTKGCSLHAI 450
Query: 649 YEKYSRQEFSGVAAVKP 665
EKY ++F+GVA + P
Sbjct: 451 REKYKHEKFNGVAKLSP 467
>Medtr3g088415.1 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182656 | 20130731
Length = 505
Score = 183 bits (464), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 176/310 (56%), Gaps = 18/310 (5%)
Query: 368 LPRKKSTRRKSYTTSLIERSKFLKESGEVKEQD---------NLPNIDNECNQLEV-SEY 417
+P S RK++ + I S + SG + +D + NIDN+ ++ + +
Sbjct: 183 VPAVDSIERKTFCSLNISDSNY--PSGNICSRDILVELEKGEKIVNIDNDYMDPQLCATF 240
Query: 418 IDDIYQYYWVTEAYSPTLANYMS-IQTDITPQMRGILVNWLIEVHFKYDLMPETLYLTIT 476
DIY++ +E ++M IQ DI P MR IL++WL+EV +Y L+P+TLYLT+
Sbjct: 241 ACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVN 300
Query: 477 LLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGMEKL 536
+D+YLS + + +QL+G+ ++++ASKYE+ P+V++ I+ +Y +D++L ME
Sbjct: 301 YIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKDEVLQMEST 360
Query: 537 VLRKLNFRLNCPTPYVFLVRFLKAAQTVDK----KLEHMAFFLIELCLVEYEALAFKPSL 592
VL L F + PT FL RF++AAQ +D+ +LE + F+ EL L+EY L + PSL
Sbjct: 361 VLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNFIAELSLLEYSMLCYAPSL 420
Query: 593 LCASALYVARCTL-QITPPWTPLLRKHTRYEASQIRGCADMILRFHKAAGVGKLTVTYEK 651
+ AS++++A+ L PW P L+ +T+Y+ S + C + R + L EK
Sbjct: 421 IAASSIFLAKYMLFPAMKPWNPTLQHYTQYQPSDLCACVKDLHRLCCNSPNSNLPAIKEK 480
Query: 652 YSRQEFSGVA 661
Y++ ++ VA
Sbjct: 481 YNQHKYKYVA 490
>Medtr2g102520.1 | carboxy-terminal domain cyclin | HC |
chr2:44171841-44168809 | 20130731
Length = 479
Score = 182 bits (463), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 173/285 (60%), Gaps = 17/285 (5%)
Query: 353 QCVGEGNLITSSSEFLPRKKSTRRKSYTTSLIERSK--FLKESGEVKEQDNLPNIDNECN 410
QC + NLI S + +R ++ +S +++K + E +V + ++ +ID +
Sbjct: 156 QCGTDNNLIQS--------QMSRISAWPSSSQKKAKKGNISELLDVSKHPDVADIDADFE 207
Query: 411 QLEV-SEYIDDIYQYYWVTEAYSPTLANYM-SIQTDITPQMRGILVNWLIEVHFKYDLMP 468
++ S Y DIY + V E N+M ++Q DITP MR ILV+WL+EV Y L
Sbjct: 208 DPQLCSHYAADIYDHLRVAELSRRPYPNFMETVQQDITPSMRAILVDWLVEVSEGYKLQA 267
Query: 469 ETLYLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRD 528
TLYLT+ L+D +LS+ I++ +QL+G+T +L+ASKYE+ PR++D I+ +YT++
Sbjct: 268 NTLYLTVYLIDWFLSKNCIERERLQLLGITCMLIASKYEEVNAPRIEDFCFITDNTYTKE 327
Query: 529 QMLGMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTVDKK----LEHMAFFLIELCLVEYE 584
+++ +E LVL+ +++L PT FL RFL+AAQ K+ LE++A +L EL L+ Y
Sbjct: 328 EVVKLESLVLKSSSYQLFAPTTKTFLRRFLRAAQASYKRPSIELEYLANYLAELTLMNYG 387
Query: 585 ALAFKPSLLCASALYVARCTL-QITPPWTPLLRKHTRYEASQIRG 628
L F PS++ ASA+++AR TL Q + PW P L + Y+AS ++
Sbjct: 388 FLNFLPSMIAASAVFLARWTLDQSSHPWNPTLEHYASYKASDLKA 432
>Medtr2g102550.1 | carboxy-terminal domain cyclin | HC |
chr2:44178430-44174949 | 20130731
Length = 429
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 159/270 (58%), Gaps = 7/270 (2%)
Query: 401 NLPNIDNECNQLEV-SEYIDDIYQYYWVTEAYSPTLANYM-SIQTDITPQMRGILVNWLI 458
++PNID + ++ S Y DIY V E N+M ++Q DITP MR IL++WL+
Sbjct: 150 DIPNIDADIEDPQLCSFYAADIYDNLRVAELSRRPHPNFMETVQRDITPGMRAILIDWLV 209
Query: 459 EVHFKYDLMPETLYLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLL 518
EV +++L TLYLT+ L+D +LS+ +I+ +QL+G+T +L+ASKYE+ ++D
Sbjct: 210 EVSEQFNLQANTLYLTVYLIDWFLSKNSIEIKRLQLLGITCMLIASKYEEINANHIEDFC 269
Query: 519 SISGESYTRDQMLGMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTVDKK----LEHMAFF 574
++ +YTR+++L ME VL+ ++L+ PT FL RFL+AAQ ++ LE++A +
Sbjct: 270 VMTDNTYTREEVLNMEIQVLKSSAYQLSAPTTKHFLRRFLRAAQASYQRPSVELEYLANY 329
Query: 575 LIELCLVEYEALAFKPSLLCASALYVARCTL-QITPPWTPLLRKHTRYEASQIRGCADMI 633
L EL L+ Y L F PS++ ASA+++AR TL Q PW P L + Y+AS ++ +
Sbjct: 330 LAELTLMNYGFLNFFPSMIAASAVFLARWTLDQSRHPWNPTLEHYASYKASDLKATVLAL 389
Query: 634 LRFHKAAGVGKLTVTYEKYSRQEFSGVAAV 663
+ KY + +F GVA +
Sbjct: 390 QNLQLNSDDCPYPAIRTKYRQSKFHGVAVL 419
>Medtr3g088405.1 | carboxy-terminal domain cyclin | HC |
chr3:40170176-40175369 | 20130731
Length = 510
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 155/259 (59%), Gaps = 14/259 (5%)
Query: 414 VSEYIDDIYQYYWVTEAYSPTLANYMS-IQTDITPQMRGILVNWLIEVHFKYDLMPETLY 472
+ + +IY+ V+E + +YM IQ I MR +L++WL+EV +Y L+P+TL+
Sbjct: 240 CASFAHEIYENLRVSEKFKRPSMDYMEKIQKKINASMRAMLIDWLVEVADEYRLLPDTLF 299
Query: 473 LTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLG 532
L + LD+YLS + +QL+G+T +++A+KYE+ P+V++ ++ +Y+++Q+L
Sbjct: 300 LAVNYLDRYLSGKAMNTQQLQLLGVTCMMIAAKYEEICAPKVEEFCYVTDNTYSKEQVLE 359
Query: 533 MEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTVDK----KLEHMAFFLIELCLVEYEALAF 588
ME VL L F + PT FL RF+ AQ + +LE++A ++ +L L+EY+ L +
Sbjct: 360 MESSVLNFLKFEMTAPTIRCFLRRFITVAQQTCEIPLMQLEYLADYVADLSLLEYDMLKY 419
Query: 589 KPSLLCASALYVARCTLQITP-PWTPLLRKHTRYEASQIRGCAD---MILR--FHKAAGV 642
PSL+ ASA ++A+ L T PW +LR +T Y+AS++R C + ++ R +H + +
Sbjct: 420 TPSLIAASATFLAKYILLSTKNPWNSMLRHYTGYQASELRECVEGLHLLYRNGYHSSPSI 479
Query: 643 GKLTVTYEKYSRQEFSGVA 661
T EKYS+ +F A
Sbjct: 480 ---TAIREKYSQHKFKFAA 495
>Medtr5g023790.2 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468437 | 20130731
Length = 357
Score = 167 bits (422), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 115/175 (65%), Gaps = 7/175 (4%)
Query: 412 LEVSEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPETL 471
L V+EYI+D+Y YY E+ NYM+ Q DI +MR ILV+WLIEVH K+DLM ETL
Sbjct: 167 LAVAEYIEDLYSYYRKVESTGCVSPNYMAQQFDINERMRAILVDWLIEVHDKFDLMHETL 226
Query: 472 YLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQML 531
+LT+ L+D++L + ++ + +QLVGL +LLA KYE+ P V DL+ IS +YTR ++L
Sbjct: 227 FLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYTRKEVL 286
Query: 532 GMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQT-------VDKKLEHMAFFLIELC 579
MEK+++ L F ++ PT YVF+ RFLKAAQ + +K M FF I C
Sbjct: 287 EMEKVMVNALKFNISVPTAYVFMRRFLKAAQADRKVRTQISEKGSSMPFFFIITC 341
>Medtr3g088415.2 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182268 | 20130731
Length = 443
Score = 160 bits (404), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 152/261 (58%), Gaps = 18/261 (6%)
Query: 368 LPRKKSTRRKSYTTSLIERSKFLKESGEVKEQD---------NLPNIDNECNQLEV-SEY 417
+P S RK++ + I S + SG + +D + NIDN+ ++ + +
Sbjct: 183 VPAVDSIERKTFCSLNISDSNY--PSGNICSRDILVELEKGEKIVNIDNDYMDPQLCATF 240
Query: 418 IDDIYQYYWVTEAYSPTLANYMS-IQTDITPQMRGILVNWLIEVHFKYDLMPETLYLTIT 476
DIY++ +E ++M IQ DI P MR IL++WL+EV +Y L+P+TLYLT+
Sbjct: 241 ACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVN 300
Query: 477 LLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGMEKL 536
+D+YLS + + +QL+G+ ++++ASKYE+ P+V++ I+ +Y +D++L ME
Sbjct: 301 YIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKDEVLQMEST 360
Query: 537 VLRKLNFRLNCPTPYVFLVRFLKAAQTVDK----KLEHMAFFLIELCLVEYEALAFKPSL 592
VL L F + PT FL RF++AAQ +D+ +LE + F+ EL L+EY L + PSL
Sbjct: 361 VLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNFIAELSLLEYSMLCYAPSL 420
Query: 593 LCASALYVARCTL-QITPPWT 612
+ AS++++A+ L PW
Sbjct: 421 IAASSIFLAKYMLFPAMKPWV 441
>Medtr3g102510.1 | carboxy-terminal domain cyclin | HC |
chr3:47243553-47241418 | 20130731
Length = 340
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 146/251 (58%), Gaps = 6/251 (2%)
Query: 417 YIDDIYQYYWVTEAYSPTLANYM-SIQTDITPQMRGILVNWLIEVHFKYDLMPETLYLTI 475
Y+ DI+ Y E + YM ++Q IT MRG LV+WL+EV +Y L+PETL+L++
Sbjct: 74 YVSDIFDYLQTMEKKRRPMFGYMENVQRGITSNMRGTLVDWLVEVADEYTLLPETLHLSV 133
Query: 476 TLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGMEK 535
+ +D++LS I + +QL+G++++L+ASKYE+ P+ D I+ +Y D++L ME
Sbjct: 134 SYIDRFLSNQPIIRSKLQLLGVSSMLIASKYEEITPPKAIDFCQITDNTYDLDEVLKMEA 193
Query: 536 LVLRKLNFRLNCPTPYVFLVRFLKAA----QTVDKKLEHMAFFLIELCLVEYEALAFKPS 591
+L+ LNF + P FL F+ A +T + + E++ +L ++ L++YE + F PS
Sbjct: 194 DILKTLNFEMGNPNVITFLKSFVGIASENQKTSNLQFEYLCNYLADISLLDYECIRFMPS 253
Query: 592 LLCASALYVARCTLQI-TPPWTPLLRKHTRYEASQIRGCADMILRFHKAAGVGKLTVTYE 650
++ AS +++AR L+ PWT L + Y+++++ C ++ + + E
Sbjct: 254 IVAASVIFLARFILRPGVHPWTSSLCECLGYKSAELEECVMILHDLYLSRRAASFKAVRE 313
Query: 651 KYSRQEFSGVA 661
KY +Q+F VA
Sbjct: 314 KYKQQKFKYVA 324
>Medtr3g102520.1 | carboxy-terminal domain cyclin | HC |
chr3:47250517-47247642 | 20130731
Length = 372
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 143/262 (54%), Gaps = 12/262 (4%)
Query: 410 NQLEVSEYIDDIYQYYWVTEAYS---PTLANYMSIQTDITPQMRGILVNWLIEVHFKYDL 466
NQ + Y+ DI Y E P + ++Q I+ MRG LV+WL+EV +Y L
Sbjct: 84 NQHIIQPYVSDISDYLRTMEMQKKRRPMVGYLENVQRGISSNMRGTLVDWLVEVADEYKL 143
Query: 467 MPETLYLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYT 526
+PETL+L+++ +D++LS + + +QL+G++++L+ASKYE+ P+ D I+ +Y
Sbjct: 144 LPETLHLSVSYIDRFLSIEPVSRSKLQLLGVSSMLIASKYEEITPPKAVDFCQITDNTYD 203
Query: 527 RDQMLGMEKLVLRKLNFRLNCPTPYVFLVRFLKAA----QTVDKKLEHMAFFLIELCLVE 582
+++L ME +L+ LNF + P FL RF+ A + + + E + +L +L L++
Sbjct: 204 LEEVLKMEADILKSLNFEMGNPNVITFLKRFIGIACENRKNSNLQFEFLCSYLADLSLLD 263
Query: 583 YEALAFKPSLLCASALYVARCTLQITP---PWTPLLRKHTRYEASQIRGCADMILRFHKA 639
YE F PS++ AS +++AR I P PWTP L + Y ++ + C ++ + +
Sbjct: 264 YECTRFLPSVVAASVIFLAR--FIIRPGAHPWTPSLCECLGYTSANLEDCVIILHDLYMS 321
Query: 640 AGVGKLTVTYEKYSRQEFSGVA 661
G +KY + + VA
Sbjct: 322 RKAGSFKAVRDKYKQNKLKCVA 343
>Medtr1g018680.1 | carboxy-terminal domain cyclin | HC |
chr1:5434143-5436837 | 20130731
Length = 363
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 143/253 (56%), Gaps = 8/253 (3%)
Query: 417 YIDDIYQYYWVTEAYSPT--LANYMS-IQTDITPQMRGILVNWLIEVHFKYDLMPETLYL 473
Y+ DIY Y E S L +Y+ +Q D+ MRG+LV+WL+EV +Y L+ +TLY
Sbjct: 91 YVSDIYDYLRNMEVDSSKRPLCDYIQKVQRDVNASMRGVLVDWLVEVAEEYKLVSDTLYF 150
Query: 474 TITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGM 533
+++ +D++LS + + +QL+G+ ++L+ASKYE+ P V+D I+ +Y+++++L M
Sbjct: 151 SVSYIDRFLSLNDLTRQKLQLLGVASMLVASKYEEIKPPEVEDFCYITDNTYSKEEVLTM 210
Query: 534 EKLVLRKLNFRLNCPTPYVFL--VRFLKAAQTVDKKL--EHMAFFLIELCLVEYEALAFK 589
E +L+ L F L PT FL V F+ +L E + +L EL L++Y + F
Sbjct: 211 EADILKSLKFELGGPTIKTFLRHVCFIDYVSLYASELQFEFLCSYLAELSLLDYNCVKFL 270
Query: 590 PSLLCASALYVARCTLQI-TPPWTPLLRKHTRYEASQIRGCADMILRFHKAAGVGKLTVT 648
PS++ AS +++AR L T PW + + TRY+ + ++ C I + G L
Sbjct: 271 PSMVAASVVFLARFMLSPKTHPWNSAIYEFTRYKPADLKECVLNIHDLYLGRKGGSLQAV 330
Query: 649 YEKYSRQEFSGVA 661
+KY + +F VA
Sbjct: 331 RDKYKQHKFKCVA 343
>Medtr3g061680.1 | carboxy-terminal domain cyclin | LC |
chr3:24614151-24614996 | 20130731
Length = 281
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 155/262 (59%), Gaps = 12/262 (4%)
Query: 409 CNQLEVSEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMP 468
CN+ + ++Y DD+Y++Y + E S AN + D QMR +V+WLI+ H++ LMP
Sbjct: 14 CNEKKFTDYDDDLYKFYHLEE--SQIRANSKGFKVDF--QMRMNVVDWLIQTHYEQKLMP 69
Query: 469 ETLYLTITLLDQYLSQVTIKKIDM---QLVGLTTLLLASKYEDFWHPRVKDLLSISGESY 525
ETLYL + +LD+ LS++ + M +L+GL++LLLASKYE V D+ ++ Y
Sbjct: 70 ETLYLCVNILDRVLSKIKFEVTTMDKLKLIGLSSLLLASKYEQRSAVGVYDVEYMADYIY 129
Query: 526 TRDQMLGMEKLVLRKLNFRLNCPTPYVFLVRFLKAA--QTVDKKLEHMAFFLIELCLVEY 583
+++ MEKL+L++L + L PTPYVFLVR ++A DK +E+M FF EL L
Sbjct: 130 MPEEICQMEKLILQELGWILTVPTPYVFLVRNMRACLLSDQDKIMENMVFFFSELSLTNQ 189
Query: 584 EALA-FKPSLLCASALYVARCTLQITPPWTPLLRKHTRYEASQIRGCADMILR-FHKAAG 641
+ +KPS++ A ++Y AR + P W+ L+ T Y ++ CA+++++ + G
Sbjct: 190 SIVCDYKPSMIAACSVYCARFVVGRYPFWSNDLKMCTGYSEEKLLSCANVMIKSCSQICG 249
Query: 642 VGKLTVTYEKYSRQEFSGVAAV 663
G + V ++K+S S V+ +
Sbjct: 250 DGIMEV-FKKFSSLYQSRVSCI 270
>Medtr3g060770.1 | carboxy-terminal domain cyclin | LC |
chr3:24109546-24108680 | 20130731
Length = 288
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 138/231 (59%), Gaps = 10/231 (4%)
Query: 410 NQLEVSEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPE 469
N+ + S+Y DD+Y++Y + E S AN + D MR I+V+WLI+ H+K LMPE
Sbjct: 25 NKQKFSDYDDDLYKFYHIEE--SQIRANSKGFKVDFL--MRKIVVDWLIQTHYKQKLMPE 80
Query: 470 TLYLTITLLDQYLSQVTIKKIDM---QLVGLTTLLLASKYEDFWHPRVKDLLSISGESYT 526
TLYL + +LD++LS++ + M +L+GL++LLLASKYE V D+ ++ Y
Sbjct: 81 TLYLCVNILDRFLSKIEFEVTTMDKLKLMGLSSLLLASKYEQRSVVGVYDIEGMADYIYM 140
Query: 527 RDQMLGMEKLVLRKLNFRLNCPTPYVFLVRFLKAA--QTVDKKLEHMAFFLIELCLVEYE 584
++ MEKL+L++L + L PTPYVFL+R ++ DK +E M FF EL L +
Sbjct: 141 PKEICQMEKLILQELGWILTVPTPYVFLIRNIRTCLLSDEDKIMEKMVFFFSELSLTNHS 200
Query: 585 ALA-FKPSLLCASALYVARCTLQITPPWTPLLRKHTRYEASQIRGCADMIL 634
+ +KPS++ A ++Y AR ++ P W+ L+ T Y ++ CA +++
Sbjct: 201 IVCDYKPSMIAACSVYCARFVVERYPFWSNDLKMCTGYSEDKLLSCASVMM 251
>Medtr3g060820.1 | carboxy-terminal domain cyclin | LC |
chr3:24117223-24116390 | 20130731
Length = 277
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 154/256 (60%), Gaps = 12/256 (4%)
Query: 415 SEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPETLYLT 474
++Y DD+Y++Y + E S AN + D QMR +V+WLI+ H++ LMPETLYL
Sbjct: 20 TDYDDDLYKFYHLEE--SQIRANSKGFKVDF--QMRKNVVDWLIQTHYEQKLMPETLYLC 75
Query: 475 ITLLDQYLSQV--TIKKID-MQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQML 531
+ +LD+ LS++ + +D ++L+GL++LLLASKYE V D+ ++ Y +++
Sbjct: 76 VNVLDRVLSKIKFEVTTVDKLKLIGLSSLLLASKYEQRSVVGVYDVEYMADYIYMPEEIC 135
Query: 532 GMEKLVLRKLNFRLNCPTPYVFLVRFLKAA--QTVDKKLEHMAFFLIELCLVEYEALA-F 588
MEKL+L+KL + L PTPYVFLVR ++A DK +E+M FF E+ L + + +
Sbjct: 136 QMEKLILQKLGWILTVPTPYVFLVRNIRACLLSDEDKIMENMVFFFSEVSLTNHSIVCDY 195
Query: 589 KPSLLCASALYVARCTLQITPPWTPLLRKHTRYEASQIRGCADMILR-FHKAAGVGKLTV 647
KPSL+ A ++Y AR ++ P W+ L+ T Y + CA+++++ + G G + V
Sbjct: 196 KPSLIAACSVYCARFVVERYPFWSNDLKICTGYSEENLWSCANVMMKSCIQICGDGHMEV 255
Query: 648 TYEKYSRQEFSGVAAV 663
++K+S S V+ +
Sbjct: 256 -FKKFSSLYQSRVSCI 270
>Medtr3g102530.1 | carboxy-terminal domain cyclin | HC |
chr3:47254814-47252673 | 20130731
Length = 352
Score = 142 bits (359), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 139/255 (54%), Gaps = 12/255 (4%)
Query: 417 YIDDIYQYYWVTEAYS---PTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPETLYL 473
Y DI Y E P + +Q +T MRGILV+WL+EV +Y L+P+TL+L
Sbjct: 84 YASDISNYLRTMEVQKKRRPMIGYIEKVQRGVTANMRGILVDWLVEVAEEYKLLPQTLHL 143
Query: 474 TITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGM 533
++ +D++LS ++ + +QL+G++++L+ASKYE+ P+ D I+ +Y Q++ M
Sbjct: 144 AVSYIDRFLSNESVNRSKLQLLGVSSMLIASKYEEISPPKAVDFCQITDNTYELKQVIKM 203
Query: 534 EKLVLRKLNFRLNCPTPYVFLVRFLKAA----QTVDKKLEHMAFFLIELCLVEYEALAFK 589
E +L+ LNF + P FL ++ A +T ++E + +L EL L++YE + F
Sbjct: 204 EADILKSLNFEMGNPHVNTFLKEYIGPATEDLKTSKLQMEFLCNYLAELSLIDYECIRFL 263
Query: 590 PSLLCASALYVARCTLQITP---PWTPLLRKHTRYEASQIRGCADMILRFHKAAGVGKLT 646
PS++ AS +++AR I P P T L + Y+++++ C ++ + L
Sbjct: 264 PSMVAASVIFLAR--FIICPGVHPLTSSLSECLFYKSAELEECVLILHDLYLVRRAASLK 321
Query: 647 VTYEKYSRQEFSGVA 661
EKY + +F VA
Sbjct: 322 AVREKYKQHKFKNVA 336
>Medtr3g460990.1 | carboxy-terminal domain cyclin | LC |
chr3:24061471-24062322 | 20130731
Length = 283
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 135/227 (59%), Gaps = 10/227 (4%)
Query: 415 SEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPETLYLT 474
S+Y DD+Y++Y + E S N + D Q+R +V+WLI+ H++ LMPET YL
Sbjct: 26 SDYDDDLYKFYHLEE--SQIQGNSNGFKVD--SQIRKNVVDWLIQTHYEQKLMPETFYLC 81
Query: 475 ITLLDQYLSQVTIKKIDMQ---LVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQML 531
+ +LD+ LS++ + M+ L+GL++LLLASKYE V + ++ Y +++
Sbjct: 82 VNILDRVLSKINFEVKTMEKLKLIGLSSLLLASKYEQRKAVGVYHVEYMADYIYMPEEIC 141
Query: 532 GMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTV--DKKLEHMAFFLIELCLVEYEALA-F 588
MEKL+L++L + L PTPYVFLVR +KA + DK +E+M FF EL L + + +
Sbjct: 142 QMEKLILQELGWILTVPTPYVFLVRNVKACVSSDEDKIMENMVFFFSELSLTNHSIVCDY 201
Query: 589 KPSLLCASALYVARCTLQITPPWTPLLRKHTRYEASQIRGCADMILR 635
KPSL+ A ++Y AR ++ P W+ L+ T Y + CA ++++
Sbjct: 202 KPSLIAACSVYCARFVVERYPFWSNDLKMCTGYSEENLLSCAHVMMK 248
>Medtr3g060400.1 | carboxy-terminal domain cyclin | LC |
chr3:23689234-23690085 | 20130731
Length = 283
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 135/227 (59%), Gaps = 10/227 (4%)
Query: 415 SEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPETLYLT 474
S+Y DD+Y++Y + E S N + D Q+R +V+WLI+ H++ LMPET YL
Sbjct: 26 SDYDDDLYKFYHLEE--SQIQGNSNGFKVD--SQIRKNVVDWLIQTHYEQKLMPETFYLC 81
Query: 475 ITLLDQYLSQVTIKKIDMQ---LVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQML 531
+ +LD+ LS++ + M+ L+GL++LLLASKYE V + ++ Y +++
Sbjct: 82 VNILDRVLSKINFEVKTMEKLKLIGLSSLLLASKYEQRKAVGVYHVEYMADYIYMPEEIC 141
Query: 532 GMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTV--DKKLEHMAFFLIELCLVEYEALA-F 588
MEKL+L++L + L PTPYVFLVR +KA + DK +E+M FF EL L + + +
Sbjct: 142 QMEKLILQELGWILTVPTPYVFLVRNVKACVSSDEDKIMENMVFFFSELSLTNHSIVCDY 201
Query: 589 KPSLLCASALYVARCTLQITPPWTPLLRKHTRYEASQIRGCADMILR 635
KPSL+ A ++Y AR ++ P W+ L+ T Y + CA ++++
Sbjct: 202 KPSLIAACSVYCARFVVERYPFWSNDLKMCTGYSEENLLSCAHVMMK 248
>Medtr3g102540.1 | carboxy-terminal domain cyclin | LC |
chr3:47258291-47259784 | 20130731
Length = 277
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 140/238 (58%), Gaps = 4/238 (1%)
Query: 435 LANYMSI-QTDITPQMRGILVNWLIEVHFKYDLMPETLYLTITLLDQYLSQVTIKKIDMQ 493
+ +YM I Q ITP++RG LV+WL+EV +Y L +TL+L ++ +D +LS I++I+++
Sbjct: 29 MKDYMEILQRYITPELRGKLVDWLVEVAEEYKLHNDTLHLAVSYIDIFLSSHPIRRINLE 88
Query: 494 LVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGMEKLVLRKLNFRLNCPTPYVF 553
L+G+++ +ASKYED P+V+DL + + + ++++ ME +L+ L+F L+ PT F
Sbjct: 89 LLGVSSFYIASKYEDITPPQVQDLCFTTRDKFNKEEVQEMENKILKTLDFDLSNPTVMTF 148
Query: 554 LVRFLKAAQTVDKKLEHMAFFLIELCLVEYEALAFKPSLLCASALYVARCTLQI-TPPWT 612
L R A + E + +L EL L++Y+ L+F PSL+ AS +++AR + PW
Sbjct: 149 L-RQESAKSDSYLQFEFLTNYLAELSLLDYDCLSFLPSLVAASVVFLARIIFWPKSLPWA 207
Query: 613 PLLRKHTRYEASQIRGCADMILRFHKAAGVGKLTVTYEKYSRQEFSGVAAVKPLDRLP 670
L++++ Y+ ++R C ++ H + KY + EF VA + RLP
Sbjct: 208 T-LQEYSEYKPVELRECVLVLHDLHTSEKGASFKAIRTKYKQHEFEYVADLSSPPRLP 264
>Medtr3g060410.1 | carboxy-terminal domain cyclin | LC |
chr3:23691060-23693543 | 20130731
Length = 362
Score = 136 bits (342), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 121/196 (61%), Gaps = 6/196 (3%)
Query: 445 ITPQMRGILVNWLIEVHFKYDLMPETLYLTITLLDQYLSQVTIKKIDMQ---LVGLTTLL 501
+ Q+R +V+WLI+ H++ LMPETLYL + +LD+ LS++ + M+ L+GL++LL
Sbjct: 131 VDSQLRKNVVDWLIQTHYQQKLMPETLYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLL 190
Query: 502 LASKYEDFWHPRVKDLLSISGESYTRDQMLGMEKLVLRKLNFRLNCPTPYVFLVRFLKAA 561
LASKYE V D+ ++ Y +++ MEKL+L++L + L PTPYVFLVR ++A
Sbjct: 191 LASKYEQRRAVGVYDVEYLADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVRNIRAC 250
Query: 562 QTV--DKKLEHMAFFLIELCLVEYEALA-FKPSLLCASALYVARCTLQITPPWTPLLRKH 618
DK +EHM FF EL L + + +KPS++ A A+Y+AR + P W+ L+
Sbjct: 251 NLSDEDKIMEHMVFFFSELSLTNHSIVCDYKPSMIAACAVYLARFIVGRYPFWSNDLKMC 310
Query: 619 TRYEASQIRGCADMIL 634
T Y ++ CA +++
Sbjct: 311 TGYSEDKLLSCAHVMM 326
>Medtr3g088415.3 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40181795 | 20130731
Length = 397
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 123/210 (58%), Gaps = 13/210 (6%)
Query: 368 LPRKKSTRRKSYTTSLIERSKFLKESGEVKEQD---------NLPNIDNECNQLEV-SEY 417
+P S RK++ + I S + SG + +D + NIDN+ ++ + +
Sbjct: 183 VPAVDSIERKTFCSLNISDSNY--PSGNICSRDILVELEKGEKIVNIDNDYMDPQLCATF 240
Query: 418 IDDIYQYYWVTEAYSPTLANYMS-IQTDITPQMRGILVNWLIEVHFKYDLMPETLYLTIT 476
DIY++ +E ++M IQ DI P MR IL++WL+EV +Y L+P+TLYLT+
Sbjct: 241 ACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVN 300
Query: 477 LLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGMEKL 536
+D+YLS + + +QL+G+ ++++ASKYE+ P+V++ I+ +Y +D++L ME
Sbjct: 301 YIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKDEVLQMEST 360
Query: 537 VLRKLNFRLNCPTPYVFLVRFLKAAQTVDK 566
VL L F + PT FL RF++AAQ +D+
Sbjct: 361 VLNFLKFEMTAPTIKCFLRRFVRAAQGIDE 390
>Medtr3g102560.1 | carboxy-terminal domain cyclin | HC |
chr3:47265371-47267354 | 20130731
Length = 324
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 140/238 (58%), Gaps = 3/238 (1%)
Query: 435 LANYMSI-QTDITPQMRGILVNWLIEVHFKYDLMPETLYLTITLLDQYLSQVTIKKIDMQ 493
+ +YM I Q DI P+MRGIL++WL+EV +Y L +TL+ ++ +D++LS I ++ +Q
Sbjct: 84 MKDYMDIVQRDIDPKMRGILIDWLVEVVEEYKLQNDTLHRAVSYIDRFLSYYPICRVKLQ 143
Query: 494 LVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGMEKLVLRKLNFRLNCPTPYVF 553
L+G++++ +ASKYED P V++L I+ +Y RD++L ME +L+ L+ L PT F
Sbjct: 144 LLGVSSMYIASKYEDINPPHVEELCFITDNTYNRDEVLEMETDILKTLDNDLGSPTVKTF 203
Query: 554 LVRFLKAAQTVDKKLEHMAFFLIELCLVEYEALAFKPSLLCASALYVARCTLQI-TPPWT 612
L R A + + E ++ +L EL L++Y + F PSL+ AS +AR + T PW
Sbjct: 204 L-RQEIAKSASNLQFEFLSNYLAELSLLDYACVRFLPSLVAASITLLARFIVWPKTYPWP 262
Query: 613 PLLRKHTRYEASQIRGCADMILRFHKAAGVGKLTVTYEKYSRQEFSGVAAVKPLDRLP 670
L++++ Y+ +++ C ++ + + G T EKY + ++ VA + LP
Sbjct: 263 SALQEYSGYKPVELKECVLILHDLYMSRREGSFEATREKYKQYKYKYVANLPSPPHLP 320
>Medtr6g045270.1 | carboxy-terminal domain cyclin | LC |
chr6:11390216-11391181 | 20130731
Length = 321
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 22/256 (8%)
Query: 416 EYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPETLYLTI 475
+Y DD Y+++ + E T + I D R +L++ +I+ H+ +L PETLYL +
Sbjct: 45 DYEDDFYKFHHLEECQISTNLYGVRINCD----ERKLLIDSIIDAHYALNLAPETLYLCV 100
Query: 476 TLLDQYLSQVT-----IKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQM 530
++D++LS++ ++KI + V +LLLASKYE V+DL+ I E +
Sbjct: 101 NIIDRFLSKLNPPSTPMEKI--KFVPHISLLLASKYEQRHKLHVRDLVHIPPEV-----V 153
Query: 531 LGMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTVDKKLEHMAFFLIELCLVEYEALA-FK 589
EKL+L+KL++ L TPYVFLVR +K DK +E+M FF EL L Y + +K
Sbjct: 154 CETEKLILQKLDWNLTVTTPYVFLVRNIKDE---DKMMENMVFFFSELSLTHYSIVCDYK 210
Query: 590 PSLLCASALYVARCTLQITPPWTPLLRKH--TRYEASQIRGCADMILRFHKAAGVGKLTV 647
PS++ ASA+Y AR + P W L+ T Y ++R CA +++
Sbjct: 211 PSMIAASAVYCARIVIGRYPLWNNDLKICTGTGYSEKELRSCAMVMIELCNEICRDGTMH 270
Query: 648 TYEKYSRQEFSGVAAV 663
+ K+S +++ VA V
Sbjct: 271 VFRKFSSRDYCEVACV 286
>Medtr5g011900.1 | amine-terminal domain cyclin | LC |
chr5:3502095-3501016 | 20130731
Length = 241
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 100/176 (56%), Gaps = 4/176 (2%)
Query: 411 QLEVSEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPET 470
+L +YI+++ ++Y E + T +Y Q++I R L++ +I +H KY + E+
Sbjct: 65 KLVAMKYIEELNKFYKKDEGSTST-GDYAVSQSNIYISRRPKLLDRVIGIHTKYAISQES 123
Query: 471 LYLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQM 530
L+L + ++D++L ++++ ++LVG+ L+A KY WH +V +++ YTR Q+
Sbjct: 124 LFLAMNIVDRFLVARSVREEKLRLVGMGAWLIAYKYGGIWHLKVDTFVTLPDNPYTRAQI 183
Query: 531 LGMEKLVLRKLNFRLNCPTPYVFLVRFLKAA--QTVDK-KLEHMAFFLIELCLVEY 583
L +E+ LN +L TP+ FL F KA T + LE+M +FL EL ++ +
Sbjct: 184 LWIEEETSGALNRKLTVSTPFHFLSLFFKAPPDDTYNNFLLENMTYFLSELGMINF 239
>Medtr1g032850.1 | carboxy-terminal domain cyclin | HC |
chr1:11757673-11761366 | 20130731
Length = 555
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
Query: 448 QMRGILVNWLIEVHFKYDLMPETLYLTITLLDQYLSQVTIK-KIDMQLVGLTTLLLASKY 506
Q R +V+W++E ++ L PET++L I LLD++LS+ K + ++Q+VG+ L LA++
Sbjct: 370 QQRSRMVHWIVEHSYRKQLRPETMFLAINLLDRFLSKGYFKAERNLQIVGIACLTLATRI 429
Query: 507 EDF-WHPRV-KDLLSISGESYTRDQMLGMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTV 564
E+ + RV + I Y+R +++ ME +V L F PT Y FL +LKAA
Sbjct: 430 EENQQYNRVNQKNFYIEKSVYSRCEVVAMEWMVQEVLEFECFHPTIYNFLCFYLKAA-NA 488
Query: 565 DKKLEHMAFFLIELCLVEYEALAFKPSLLCASALYVA 601
D +E L L L + L + PS + A+ + +A
Sbjct: 489 DAVVEKRVTCLALLALSGPDQLCYWPSTIAAAIVILA 525
>Medtr5g044040.1 | amine-terminal domain cyclin | LC |
chr5:19364442-19364868 | 20130731
Length = 128
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%)
Query: 471 LYLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQM 530
L LTI ++D++L+ + + ++QLVG++ +L+ SKYE+ W P V D + +S +Y+ +Q+
Sbjct: 7 LCLTINIVDRFLAINLVSRRELQLVGISAMLMTSKYEEIWPPEVNDFVCLSDRAYSHEQI 66
Query: 531 LGMEKLVLRKLNFRL 545
L MEK ++ L + L
Sbjct: 67 LIMEKTIMGMLEWTL 81
>Medtr2g005960.1 | amine-terminal domain cyclin | LC |
chr2:402942-401842 | 20130731
Length = 234
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 14/123 (11%)
Query: 406 DNECNQLEVSEYIDDIYQYYWVTEAYS---PTLANYMSIQTDITPQ-----------MRG 451
D+ N + +EY+D ++Q Y +T S P + + P+ +
Sbjct: 111 DDTINNMAKAEYLDKLHQLYKLTTKRSIPHPDFSCLFAGSLTFEPENHDVDMETEDAINN 170
Query: 452 ILVNWLIEVHFKYDLMPETLYLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWH 511
+ V+WL++VH++ +L E L+LTI ++D+YLS +I K D+ LV + ++ LA KY++ +
Sbjct: 171 LNVDWLVKVHYRLELQTEALFLTINIIDRYLSLTSIPKRDLMLVAICSMSLADKYKEISY 230
Query: 512 PRV 514
+V
Sbjct: 231 RKV 233
>Medtr3g100710.1 | carboxy-terminal domain cyclin | HC |
chr3:46343463-46340451 | 20130731
Length = 362
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 444 DITPQMRGILVNWLIEVHFKYDLMPETLYLTITLLDQYLSQVTIKK---IDMQLVGLTTL 500
D+ + R +++W+ +V + P YL+I +D++LS K MQL+ + L
Sbjct: 91 DLDFEARNEVIDWIQKVRAHFGFGPLCAYLSINYMDRFLSVYEFPKGRAWTMQLLAVACL 150
Query: 501 LLASKYEDFWHPRVKDLLSISGES---YTRDQMLGMEKLVLRKLNFRLNCPTPYVFLVRF 557
LA+K E+ P+ DL GES + + ME LVL L +R+ TP+ F+ F
Sbjct: 151 SLAAKVEETAVPQPLDLQ--IGESKFVFEAKTIQRMELLVLSTLKWRMQAITPFSFIECF 208
Query: 558 LKAAQTVDKKLEHMAFF----LIELCLVEYEALAFKPSLLCASALYVARCTL 605
L + DK + LI + + L FKPS + A+ VA C +
Sbjct: 209 LSKIKDDDKSSLSSSISRSTQLISSTIKGLDFLEFKPSEIAAA---VATCVV 257
>Medtr8g063120.1 | carboxy-terminal domain cyclin | HC |
chr8:26438234-26434719 | 20130731
Length = 355
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 454 VNWLIEVHFKYDLMPETLYLTITLLDQYLSQVTIKKID---MQLVGLTTLLLASKYEDFW 510
+ W+++VH Y P T YL++ +D++L + + + +QL+ + L LA+K E+
Sbjct: 98 IAWILKVHEYYGFQPLTAYLSVNYMDRFLDSRPLPESNGWPLQLLSVACLSLAAKMEE-- 155
Query: 511 HPRVKDLLS--ISGESYTRD--QMLGMEKLVLRKLNFRLNCPTPYVFLVRF 557
P V LL I G Y +L ME LVL L++RL TP FL F
Sbjct: 156 -PLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWRLRSITPLSFLSFF 205
>Medtr2g011500.1 | carboxy-terminal domain cyclin | HC |
chr2:2803180-2800861 | 20130731
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 454 VNWLIEVHFKYDLMPETLYLTITLLDQYLSQVTI---KKIDMQLVGLTTLLLASKYEDFW 510
++ +++V +L P YL I L +++S+ K ++L+ ++ L LASK ++
Sbjct: 88 ISLILQVQHSCNLDPFIAYLAINYLHRFMSKQEFPQGKPWLIRLIVISCLSLASKMKNTH 147
Query: 511 HPRVKDLLSISGESYTRDQMLGMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTVDKKLEH 570
P K L G ++ + + ME ++L L++R+ TP+ FL F+ AQ D+ L+
Sbjct: 148 LPFSK--LQKEGCNFNGETIQKMELVILGALDWRMRSITPFPFLNFFISLAQIKDRSLKD 205
Query: 571 MAFFLIELCLVEYEALAFKPSLLCASALYVA 601
A +I + + L +KPS + A++L A
Sbjct: 206 RAAEIIFNVHNDIKFLEYKPSTVAAASLIYA 236
>Medtr8g063120.2 | carboxy-terminal domain cyclin | HC |
chr8:26438234-26434719 | 20130731
Length = 283
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 454 VNWLIEVHFKYDLMPETLYLTITLLDQYLSQVTIKKID---MQLVGLTTLLLASKYEDFW 510
+ W+++VH Y P T YL++ +D++L + + + +QL+ + L LA+K E+
Sbjct: 98 IAWILKVHEYYGFQPLTAYLSVNYMDRFLDSRPLPESNGWPLQLLSVACLSLAAKMEE-- 155
Query: 511 HPRVKDLLS--ISGESYTRD--QMLGMEKLVLRKLNFRLNCPTPYVFLVRF 557
P V LL I G Y +L ME LVL L++RL TP FL F
Sbjct: 156 -PLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWRLRSITPLSFLSFF 205
>Medtr5g065830.1 | carboxy-terminal domain cyclin | LC |
chr5:27701765-27698581 | 20130731
Length = 352
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 25/159 (15%)
Query: 405 IDNECNQLEVSEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKY 464
I+ EC+ L S+Y++ L N + D+ +M I +W+ + +
Sbjct: 62 IEKECHHLPASDYVN--------------RLKNG---ELDLQGRMESI--DWMEKAGLYF 102
Query: 465 DLMPETLYLTITLLDQYLSQVTI---KKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSIS 521
P +YL I +D++LS V + +K +QL+ L LA+K ++ PR D + +
Sbjct: 103 GFGPLCIYLAIRYMDRFLSVVDMLKERKWSIQLLAFCCLYLAAKIDEVVVPRSVD-MQMD 161
Query: 522 GESYTRDQ--MLGMEKLVLRKLNFRLNCPTPYVFLVRFL 558
+ Y D+ + E L+L LN+R+ TP+ ++ FL
Sbjct: 162 EKKYLFDKKTLRTTELLILSTLNWRMQAITPFSYIDFFL 200
>Medtr5g035360.1 | carboxy-terminal domain cyclin | HC |
chr5:15376779-15381259 | 20130731
Length = 334
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 454 VNWLIEVHFKYDLMPETLYLTITLLDQYLSQVTIKKID---MQLVGLTTLLLASKYEDFW 510
+ W+++V Y P T YL + +D++L+ + + + +QL+ + L LA+K E+
Sbjct: 81 IRWILKVQGYYGFQPVTAYLAVNYMDRFLNSRRLPQTNGWPLQLLSVACLSLAAKMEETL 140
Query: 511 HPRVKDLLSISGESYTRDQML--GMEKLVLRKLNFRLNCPTPYVFLVRF 557
P + D L + G Y + + ME LVL L++RL TP+ FL F
Sbjct: 141 VPSLLD-LQVEGVKYMFEPITIRRMELLVLSVLDWRLRSVTPFSFLSFF 188