Miyakogusa Predicted Gene
- Lj0g3v0289949.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0289949.2 Non Characterized Hit- tr|B9SL55|B9SL55_RICCO
DNA-binding protein smubp-2, putative OS=Ricinus commu,92.41,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; SUBFAMILY NOT
NAMED,NULL; DNA2/NAM7 HELIC,CUFF.19405.2
(165 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC | chr7:365184... 295 1e-80
Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC | chr1:147422... 132 2e-31
Medtr5g013820.2 | regulator of nonsense transcripts protein | HC... 91 5e-19
Medtr5g013820.1 | regulator of nonsense transcripts protein | HC... 91 5e-19
Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase super... 89 2e-18
Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-l... 82 3e-16
Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase super... 82 3e-16
Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase super... 80 8e-16
Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase super... 80 8e-16
Medtr7g034575.1 | DNA replication ATP-dependent helicase Dna2 | ... 79 2e-15
Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-l... 79 2e-15
Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-l... 79 3e-15
Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase super... 75 4e-14
Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase super... 74 8e-14
Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase super... 72 3e-13
Medtr2g105760.3 | P-loop nucleoside triphosphate hydrolase super... 72 4e-13
Medtr2g105760.2 | P-loop nucleoside triphosphate hydrolase super... 71 4e-13
Medtr5g076500.1 | P-loop nucleoside triphosphate hydrolase super... 70 1e-12
Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase super... 69 2e-12
Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase super... 69 3e-12
Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase supe... 68 3e-12
Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase super... 68 5e-12
Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase super... 67 7e-12
Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase super... 67 7e-12
Medtr5g006890.1 | RNA helicase SDE3-like protein | HC | chr5:112... 54 5e-08
Medtr5g006890.4 | RNA helicase SDE3-like protein | HC | chr5:112... 54 5e-08
Medtr5g006890.2 | RNA helicase SDE3-like protein | HC | chr5:112... 54 5e-08
Medtr5g006890.3 | RNA helicase SDE3-like protein | HC | chr5:112... 54 5e-08
Medtr2g049990.2 | RNA helicase SDE3-like protein | HC | chr2:229... 54 5e-08
Medtr2g049990.1 | RNA helicase SDE3-like protein | HC | chr2:229... 54 5e-08
Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase super... 54 8e-08
Medtr1g038815.1 | P-loop nucleoside triphosphate hydrolase super... 54 1e-07
>Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC |
chr7:36518499-36511162 | 20130731
Length = 645
Score = 295 bits (755), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/158 (89%), Positives = 153/158 (96%)
Query: 1 MKALNGKLLKTKDKSTRRNIQKELRTLSKEERKRQQLAVTDVIKSADVILTTLTGASSRK 60
MK LNGKLLKTK+K+TRR IQKELRTLS+EERKRQQLAVTDVIK++DVILTTL GASS+K
Sbjct: 303 MKVLNGKLLKTKEKNTRREIQKELRTLSREERKRQQLAVTDVIKTSDVILTTLIGASSKK 362
Query: 61 LDHTSFDLVIIDEAAQALEIACWIPLLKGSRCILAGDHLQLPPTIQSAEAEKKGLGRTLF 120
L +TSFDLVIIDEAAQALE+ACWIPLLKG+RCILAGDHLQLPPTIQS EAEKKGLGRTLF
Sbjct: 363 LGNTSFDLVIIDEAAQALEVACWIPLLKGTRCILAGDHLQLPPTIQSVEAEKKGLGRTLF 422
Query: 121 ERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKV 158
ERLAELYGDEVTSMLTVQYRMH+LIM+WSSKELY+SKV
Sbjct: 423 ERLAELYGDEVTSMLTVQYRMHQLIMDWSSKELYNSKV 460
>Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC |
chr1:14742280-14736383 | 20130731
Length = 914
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 99/148 (66%), Gaps = 5/148 (3%)
Query: 12 KDKSTRRNIQKELRTLSKEERKRQQLAVTDVIKSADVILTTLTGASS---RKLDHTSFDL 68
+D S I++ L+ L K +K+++ + +V+ A V+L T TGA+ RKL+ +FDL
Sbjct: 559 RDDSLAAGIRQLLKQLGKSLKKKEKQTINEVLSGAQVVLATNTGAADPMIRKLN--AFDL 616
Query: 69 VIIDEAAQALEIACWIPLLKGSRCILAGDHLQLPPTIQSAEAEKKGLGRTLFERLAELYG 128
V+IDEA QA+E +CWIP+L+ RCILAGD QL P I S +A + GLG +L ER A L+
Sbjct: 617 VVIDEAGQAIEPSCWIPILQAKRCILAGDQCQLAPVIFSRKALEGGLGISLLERAATLHE 676
Query: 129 DEVTSMLTVQYRMHELIMNWSSKELYSS 156
+T+ LT QYRM++ I +W+SKE+Y
Sbjct: 677 GILTTRLTTQYRMNDAIASWASKEMYGG 704
>Medtr5g013820.2 | regulator of nonsense transcripts protein | HC |
chr5:4548258-4534982 | 20130731
Length = 1275
Score = 90.9 bits (224), Expect = 5e-19, Method: Composition-based stats.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 LKTKDKSTRRNIQK---ELRTLSKEERKR----QQLAVTDVIKSADVILTTLTGASSRKL 61
L T DKS +Q+ E LS + K+ ++ ++ +SADVI T GA +L
Sbjct: 574 LDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRL 633
Query: 62 DHTSFDLVIIDEAAQALEIACWIPLLKGSR-CILAGDHLQLPPTIQSAEAEKKGLGRTLF 120
+ F V+IDE+ QA E C IPL+ G++ +L GDH QL P I +A + GL ++LF
Sbjct: 634 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 693
Query: 121 ERLAELYGDEVTSMLTVQYRMHELIMNWSSKELY 154
ERL L + L VQYRMH + + S Y
Sbjct: 694 ERLVLLGVKPIR--LQVQYRMHPCLSEFPSNSFY 725
>Medtr5g013820.1 | regulator of nonsense transcripts protein | HC |
chr5:4548278-4534982 | 20130731
Length = 1253
Score = 90.9 bits (224), Expect = 5e-19, Method: Composition-based stats.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 LKTKDKSTRRNIQK---ELRTLSKEERKR----QQLAVTDVIKSADVILTTLTGASSRKL 61
L T DKS +Q+ E LS + K+ ++ ++ +SADVI T GA +L
Sbjct: 574 LDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRL 633
Query: 62 DHTSFDLVIIDEAAQALEIACWIPLLKGSR-CILAGDHLQLPPTIQSAEAEKKGLGRTLF 120
+ F V+IDE+ QA E C IPL+ G++ +L GDH QL P I +A + GL ++LF
Sbjct: 634 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 693
Query: 121 ERLAELYGDEVTSMLTVQYRMHELIMNWSSKELY 154
ERL L + L VQYRMH + + S Y
Sbjct: 694 ERLVLLGVKPIR--LQVQYRMHPCLSEFPSNSFY 725
>Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr2:45654495-45634088 |
20130731
Length = 2328
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 34/181 (18%)
Query: 6 GKLLKTKDKSTRRNIQKELRTLSKEERKRQQLAVT-------DVIKSADVILTTLTGASS 58
GKL + K R + K+LR + +E+K + T +++ A++++TTL+G
Sbjct: 1710 GKLYEQK-----RKLYKDLRNVQAQEKKANEETKTLRNKLRKSILREAEIVVTTLSGCGG 1764
Query: 59 R----------------KLDHTSFDLVIIDEAAQALEIACWIP--LLK--GSRCILAGDH 98
+HT FD V+IDEAAQALE A IP LLK G++CI+ GD
Sbjct: 1765 DLYGVCTETMLCSKFRGPSEHTLFDAVVIDEAAQALEPASLIPLQLLKSIGTQCIMVGDP 1824
Query: 99 LQLPPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKV 158
QLP T+ S A K ++FERL + G V MLT QYRMH I + S Y +K+
Sbjct: 1825 KQLPATVLSNIASKFRFECSMFERLQKA-GHPVI-MLTEQYRMHPEICKFPSLHFYDNKL 1882
Query: 159 L 159
L
Sbjct: 1883 L 1883
>Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 1156
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
Query: 46 ADVILTTLTGASSR---KLDHTSFDLVIIDEAAQALEIACWIPL-LKGSRCILAGDHLQL 101
A+++ TT++ + + +L H FD+V+IDEAAQA E+ PL L +RC+L GD QL
Sbjct: 756 AEIVFTTVSSSGRKLFSRLSH-GFDMVVIDEAAQASEVGVLPPLSLGAARCVLVGDPQQL 814
Query: 102 PPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKV 158
P T+ S A R+LFER + T +L+VQYRMH I ++ S+ Y ++
Sbjct: 815 PATVISKAAGTLMYSRSLFERFQQ--AGCPTMLLSVQYRMHPQIRDFPSRYFYQGRL 869
>Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32517067-32511573 |
20130731
Length = 897
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 67 DLVIIDEAAQALEIACWIPL-LKG-SRCILAGDHLQLPPTIQSAEAEKKGLGRTLFERLA 124
+ ++IDEAAQ E IPL L G RC+L GD +QLP ++S A++ G GR+LFERLA
Sbjct: 582 EFLVIDEAAQLKECESAIPLQLNGLKRCVLVGDEIQLPAMVKSEIADRAGFGRSLFERLA 641
Query: 125 ELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKV 158
L ML VQYRMH I + S+E Y+ K+
Sbjct: 642 TL--GYKKHMLNVQYRMHPSISIFPSREFYNKKL 673
>Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 42 VIKSADVILTTLTGASSRKLDHTS--FDLVIIDEAAQALEIACWIPLL-KGSRCILAGDH 98
++ A ++ +TL+ + S S FD+VIIDEAAQA+E A +PL K + L GD
Sbjct: 454 ILDEATIVFSTLSFSGSHVFSKLSRNFDVVIIDEAAQAVEPATLVPLANKCKKVFLVGDP 513
Query: 99 LQLPPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSS 156
QLP T+ S A G G +LFERL + ML QYRMH I ++ S E Y++
Sbjct: 514 AQLPATVISDIATNHGYGTSLFERL--MQAGYPIKMLKTQYRMHPEIRSFPSMEFYNN 569
>Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 42 VIKSADVILTTLTGASSRKLDHTS--FDLVIIDEAAQALEIACWIPLL-KGSRCILAGDH 98
++ A ++ +TL+ + S S FD+VIIDEAAQA+E A +PL K + L GD
Sbjct: 454 ILDEATIVFSTLSFSGSHVFSKLSRNFDVVIIDEAAQAVEPATLVPLANKCKKVFLVGDP 513
Query: 99 LQLPPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSS 156
QLP T+ S A G G +LFERL + ML QYRMH I ++ S E Y++
Sbjct: 514 AQLPATVISDIATNHGYGTSLFERL--MQAGYPIKMLKTQYRMHPEIRSFPSMEFYNN 569
>Medtr7g034575.1 | DNA replication ATP-dependent helicase Dna2 | HC |
chr7:13072986-13090873 | 20130731
Length = 1335
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 48 VILTTLTGASSRKLDHTSFDLVIIDEAAQALEIACWIPLLKGSRCILAGDHLQLPPTIQS 107
V+ T G SS L + FD+ I+DEA Q PL S +L GDH QLPP + S
Sbjct: 1014 VVAVTCLGISSPLLANRRFDVCIMDEAGQTTLPVSLGPLRFASTFVLVGDHYQLPPLVHS 1073
Query: 108 AEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKV 158
EA + G+G +LF RL+E + + S L QYRM + IM+ S+ +Y ++
Sbjct: 1074 TEARENGMGMSLFCRLSEAH-PQAISALQSQYRMCQGIMDLSNALIYGDRL 1123
>Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 868
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
Query: 46 ADVILTTLTGASSR---KLDHTSFDLVIIDEAAQALEIACWIPL-LKGSRCILAGDHLQL 101
A+++ TT++ + + +L H FD+V+IDEAAQA E+ PL L +RC+L GD QL
Sbjct: 468 AEIVFTTVSSSGRKLFSRLSH-GFDMVVIDEAAQASEVGVLPPLSLGAARCVLVGDPQQL 526
Query: 102 PPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKV 158
P T+ S A R+LFER + T +L+VQYRMH I ++ S+ Y ++
Sbjct: 527 PATVISKAAGTLMYSRSLFERFQQ--AGCPTMLLSVQYRMHPQIRDFPSRYFYQGRL 581
>Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139957-7131293 | 20130731
Length = 1373
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
Query: 46 ADVILTTLTGASSR---KLDHTSFDLVIIDEAAQALEIACWIPL-LKGSRCILAGDHLQL 101
A+++ TT++ + + +L H FD+V+IDEAAQA E+ PL L +RC+L GD QL
Sbjct: 973 AEIVFTTVSSSGRKLFSRLSH-GFDMVVIDEAAQASEVGVLPPLSLGAARCVLVGDPQQL 1031
Query: 102 PPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKV 158
P T+ S A R+LFER + T +L+VQYRMH I ++ S+ Y ++
Sbjct: 1032 PATVISKAAGTLMYSRSLFERFQQ--AGCPTMLLSVQYRMHPQIRDFPSRYFYQGRL 1086
>Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32534161-32530565 |
20130731
Length = 884
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 50 LTTLTGASSRKLDHTSF----DLVIIDEAAQALEIACWIPL-LKG-SRCILAGDHLQLPP 103
L T +SS KL H S+ +++DEAAQ E IPL L G RCIL GD QLP
Sbjct: 564 LVLCTVSSSIKLIHASWLKPVQFLVVDEAAQLKECELAIPLQLHGLRRCILIGDERQLPA 623
Query: 104 TIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKV 158
++S A++ GR++FERL L G E ML VQYRMH I + KE Y K+
Sbjct: 624 LVKSKIADQCEFGRSMFERLVML-GYE-RKMLNVQYRMHPSISLFPCKEFYDGKL 676
>Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32541203-32546485 |
20130731
Length = 898
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 65/117 (55%), Gaps = 7/117 (5%)
Query: 47 DVILTTLTGASSRKL---DHTSFDLVIIDEAAQALEIACWIPL-LKG-SRCILAGDHLQL 101
+ L T +SS KL + ++IDEAAQ E IPL L G RCIL GD QL
Sbjct: 534 NACLLFCTASSSSKLYTEGMKRVEFLVIDEAAQLKECESAIPLQLHGLKRCILIGDERQL 593
Query: 102 PPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKV 158
P ++S A++ GR+LFERL L G + ML VQYRMH I + SKE Y ++
Sbjct: 594 PAMVKSKIADRAEFGRSLFERLV-LLGYK-KHMLDVQYRMHPSISMFPSKEFYDGQL 648
>Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32527815-32524102 |
20130731
Length = 860
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 46 ADVILTTLTGASSRKL---DHTSFDLVIIDEAAQALEIACWIPL-LKGSR-CILAGDHLQ 100
++ L T +SS KL + + ++IDEAAQ E IPL L G R CIL GD Q
Sbjct: 513 SNACLIFCTASSSVKLYTAEVSPIQFLVIDEAAQLKECESTIPLQLSGLRNCILIGDERQ 572
Query: 101 LPPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKV 158
LP ++S A+K GR++FERL L ML +QYRMH I + KE Y K+
Sbjct: 573 LPALVKSKIADKCEFGRSMFERLVILGYKR--HMLNIQYRMHPSISLFPCKEFYDEKL 628
>Medtr2g105760.3 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr2:45654096-45641541 |
20130731
Length = 1757
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 32/145 (22%)
Query: 6 GKLLKTKDKSTRRNIQKELRTLSKEERKRQQLAVT-------DVIKSADVILTTLTGASS 58
GKL + K R + K+LR + +E+K + T +++ A++++TTL+G
Sbjct: 1604 GKLYEQK-----RKLYKDLRNVQAQEKKANEETKTLRNKLRKSILREAEIVVTTLSGCGG 1658
Query: 59 R----------------KLDHTSFDLVIIDEAAQALEIACWIP--LLK--GSRCILAGDH 98
+HT FD V+IDEAAQALE A IP LLK G++CI+ GD
Sbjct: 1659 DLYGVCTETMLCSKFRGPSEHTLFDAVVIDEAAQALEPASLIPLQLLKSIGTQCIMVGDP 1718
Query: 99 LQLPPTIQSAEAEKKGLGRTLFERL 123
QLP T+ S A K ++FERL
Sbjct: 1719 KQLPATVLSNIASKFRFECSMFERL 1743
>Medtr2g105760.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr2:45654495-45641541 |
20130731
Length = 1863
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 32/145 (22%)
Query: 6 GKLLKTKDKSTRRNIQKELRTLSKEERKRQQLAVT-------DVIKSADVILTTLTGASS 58
GKL + K R + K+LR + +E+K + T +++ A++++TTL+G
Sbjct: 1710 GKLYEQK-----RKLYKDLRNVQAQEKKANEETKTLRNKLRKSILREAEIVVTTLSGCGG 1764
Query: 59 R----------------KLDHTSFDLVIIDEAAQALEIACWIP--LLK--GSRCILAGDH 98
+HT FD V+IDEAAQALE A IP LLK G++CI+ GD
Sbjct: 1765 DLYGVCTETMLCSKFRGPSEHTLFDAVVIDEAAQALEPASLIPLQLLKSIGTQCIMVGDP 1824
Query: 99 LQLPPTIQSAEAEKKGLGRTLFERL 123
QLP T+ S A K ++FERL
Sbjct: 1825 KQLPATVLSNIASKFRFECSMFERL 1849
>Medtr5g076500.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32648280-32643985 |
20130731
Length = 857
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 43 IKSADVILTTLTGASSRKLDHTS-FDLVIIDEAAQALEIACWIPL-LKG-SRCILAGDHL 99
+ A +IL T++ + + TS ++IDEAAQ E IPL L G CIL GD
Sbjct: 532 LSDASLILCTVSSSIKLYSEETSPVKFLVIDEAAQLKECESMIPLQLPGLQHCILIGDEK 591
Query: 100 QLPPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKVL 159
QLP ++S A+ GR++FERL L + ML VQYRMH I + KE Y K L
Sbjct: 592 QLPALVKSKIADNCRFGRSMFERLVMLGYKK--HMLNVQYRMHPSISLFPCKEFYDEKNL 649
>Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32616775-32612603 |
20130731
Length = 917
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 43 IKSADVILTTLTGA---SSRKLDHTSFDLVIIDEAAQALEIACWIPL-LKG-SRCILAGD 97
+ +A +IL T++ + + + H F ++IDEAAQ E IPL L G IL GD
Sbjct: 546 LSNACLILCTVSSSIKLYTEGMAHVKF--LVIDEAAQLKECESMIPLQLPGLQHGILIGD 603
Query: 98 HLQLPPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSK 157
QLP ++S A+ G GR++FERL L + ML VQYRMH I + KE Y +
Sbjct: 604 EKQLPALVKSKIADNCGFGRSMFERLVMLGYKK--HMLNVQYRMHPAISMFPCKEFYDEQ 661
Query: 158 V 158
+
Sbjct: 662 I 662
>Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:12235889-12229184 |
20130731
Length = 1644
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 18/143 (12%)
Query: 23 ELRTLSKEERKRQQLAVTDV-IKSADVILTTLTGASSRKLDHT----SFDLVIIDEAAQA 77
EL+ + +E +V+D K++ +I T +SS +L HT +L++IDEAAQ
Sbjct: 532 ELKRFTDDE------SVSDFCFKNSSIIFCT--ASSSFRL-HTISMKPINLLVIDEAAQL 582
Query: 78 LEIACWIPLL--KGSRCILAGDHLQLPPTIQSAEAEKKGLGRTLFERLAELYGDEVTSML 135
E +PLL + S IL GD QLP ++S G GR+LFERL+ L + ++L
Sbjct: 583 KECESIVPLLLPRISHAILVGDECQLPSMVRSNVCSVAGFGRSLFERLSLLGSPK--NLL 640
Query: 136 TVQYRMHELIMNWSSKELYSSKV 158
Q+RMH I + + YS+K+
Sbjct: 641 NTQHRMHPEISLFPNSYFYSNKI 663
>Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | scaffold0189:14094-24465 |
20130731
Length = 2395
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 43 IKSADVILTTLTGASSRKLDHTS---FDLVIIDEAAQALEIACWIPLLKGS--RCILAGD 97
++S+ +I +T +SS KL + D+++IDEAAQ E IPLL + +L GD
Sbjct: 526 LQSSSLIFST--ASSSFKLHSVAMKPLDILVIDEAAQLKECESIIPLLLPNIRHAVLVGD 583
Query: 98 HLQLPPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSK 157
QLP ++S + + G GR+LF RL++L L +QYRMH I ++ + Y ++
Sbjct: 584 ERQLPAMVESIVSYEVGFGRSLFARLSKL--GHPNHFLNIQYRMHPAISSFPNSCFYLNQ 641
Query: 158 VL 159
+L
Sbjct: 642 IL 643
>Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32566132-32571914 |
20130731
Length = 885
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 68/126 (53%), Gaps = 19/126 (15%)
Query: 43 IKSADVILTTLTGASSRKL---DHTSFDLVIIDEAAQALEIACWIPL-LKG-SRCILAGD 97
+ +A +IL T++ SS KL + + ++IDEAA E IPL L G CIL GD
Sbjct: 535 LSNASLILCTVS--SSIKLYSEEKSPVKFLVIDEAAMLKECESTIPLQLPGLCHCILIGD 592
Query: 98 HLQLPPTIQSAEAEKKGLGRTLFERLAELYGDEVTS-----MLTVQYRMHELIMNWSSKE 152
QLP ++S A++ GR++FERL VTS ML VQYRMH I + KE
Sbjct: 593 ERQLPALVKSKIADECEFGRSMFERL-------VTSGYKRHMLNVQYRMHPSISLFPCKE 645
Query: 153 LYSSKV 158
Y K+
Sbjct: 646 FYDGKI 651
>Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28858780-28854927 |
20130731
Length = 906
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 50 LTTLTGASSRKL---DHTSFDLVIIDEAAQALEIACWIPL-LKG-SRCILAGDHLQLPPT 104
L T +SS +L T ++IDEAAQ E IPL L G +L GD QLP
Sbjct: 541 LIFCTASSSTRLFTEGMTPIKFLVIDEAAQLKECESAIPLQLPGLHHAVLIGDERQLPAV 600
Query: 105 IQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSKVL 159
++S E+ G GR+LFERL L + +L QYRMH I + +KE Y +++
Sbjct: 601 VKSTVTEEAGYGRSLFERLVSLGYKK--HLLNTQYRMHPSISLFPNKEFYEEQLV 653
>Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28870689-28861592 |
20130731
Length = 1113
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 9/122 (7%)
Query: 43 IKSADVILTTLTGAS---SRKLDHTSFDLVIIDEAAQALEIACWIPL-LKGSR-CILAGD 97
K++ +I T + +S S LD ++++IDEAAQ E IPL L G R +L GD
Sbjct: 614 FKTSRMIFCTASSSSRLYSEGLDR--LEMLVIDEAAQLKECEANIPLQLPGLRHVVLIGD 671
Query: 98 HLQLPPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHELIMNWSSKELYSSK 157
QLP ++S ++K G GR+LFERL L G + +L VQYRMH I + + + Y ++
Sbjct: 672 EKQLPALVKSEISDKAGFGRSLFERLV-LLGHK-KHLLNVQYRMHPSISLFPNMQFYDNQ 729
Query: 158 VL 159
++
Sbjct: 730 LV 731
>Medtr5g006890.1 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 48 VILTTLTGAS---SRKLDHTSFDLVIIDEAAQALEIACWIPLLKGSR----CILAGDHLQ 100
++++T AS + + F + +DEA QA E IP+ R +LAGD LQ
Sbjct: 517 IVVSTYMSASLLFAEDVARGHFSHIFLDEAGQASEPETMIPIAHLCRRDTVVVLAGDPLQ 576
Query: 101 LPPTIQSAEAEKKGLGRTLFERL--AELYGD---EVTSMLTVQYRMHELIMNWSSKELYS 155
L P I S +A++ LG + ERL ELYG + L YR H I+ SK Y
Sbjct: 577 LGPVIFSKKADEYKLGVSFLERLFKCELYGSGDVNYITKLVRNYRCHPEILYLPSKLFYF 636
Query: 156 SKVL 159
+++
Sbjct: 637 GELM 640
>Medtr5g006890.4 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 48 VILTTLTGAS---SRKLDHTSFDLVIIDEAAQALEIACWIPLLKGSR----CILAGDHLQ 100
++++T AS + + F + +DEA QA E IP+ R +LAGD LQ
Sbjct: 258 IVVSTYMSASLLFAEDVARGHFSHIFLDEAGQASEPETMIPIAHLCRRDTVVVLAGDPLQ 317
Query: 101 LPPTIQSAEAEKKGLGRTLFERL--AELYGD---EVTSMLTVQYRMHELIMNWSSKELYS 155
L P I S +A++ LG + ERL ELYG + L YR H I+ SK Y
Sbjct: 318 LGPVIFSKKADEYKLGVSFLERLFKCELYGSGDVNYITKLVRNYRCHPEILYLPSKLFYF 377
Query: 156 SKVL 159
+++
Sbjct: 378 GELM 381
>Medtr5g006890.2 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 48 VILTTLTGAS---SRKLDHTSFDLVIIDEAAQALEIACWIPLLKGSR----CILAGDHLQ 100
++++T AS + + F + +DEA QA E IP+ R +LAGD LQ
Sbjct: 517 IVVSTYMSASLLFAEDVARGHFSHIFLDEAGQASEPETMIPIAHLCRRDTVVVLAGDPLQ 576
Query: 101 LPPTIQSAEAEKKGLGRTLFERL--AELYGD---EVTSMLTVQYRMHELIMNWSSKELYS 155
L P I S +A++ LG + ERL ELYG + L YR H I+ SK Y
Sbjct: 577 LGPVIFSKKADEYKLGVSFLERLFKCELYGSGDVNYITKLVRNYRCHPEILYLPSKLFYF 636
Query: 156 SKVL 159
+++
Sbjct: 637 GELM 640
>Medtr5g006890.3 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 48 VILTTLTGAS---SRKLDHTSFDLVIIDEAAQALEIACWIPLLKGSR----CILAGDHLQ 100
++++T AS + + F + +DEA QA E IP+ R +LAGD LQ
Sbjct: 258 IVVSTYMSASLLFAEDVARGHFSHIFLDEAGQASEPETMIPIAHLCRRDTVVVLAGDPLQ 317
Query: 101 LPPTIQSAEAEKKGLGRTLFERL--AELYGD---EVTSMLTVQYRMHELIMNWSSKELYS 155
L P I S +A++ LG + ERL ELYG + L YR H I+ SK Y
Sbjct: 318 LGPVIFSKKADEYKLGVSFLERLFKCELYGSGDVNYITKLVRNYRCHPEILYLPSKLFYF 377
Query: 156 SKVL 159
+++
Sbjct: 378 GELM 381
>Medtr2g049990.2 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 681
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 48 VILTTLTGAS---SRKLDHTSFDLVIIDEAAQALEIACWIPLLKGSR----CILAGDHLQ 100
++++T AS + + F + +DEA QA E IP+ R +LAGD LQ
Sbjct: 258 IVVSTYMSASLLFAEDVARGHFSHIFLDEAGQASEPETMIPIAHLCRRDTVVVLAGDPLQ 317
Query: 101 LPPTIQSAEAEKKGLGRTLFERL--AELYGD---EVTSMLTVQYRMHELIMNWSSKELYS 155
L P I S +A++ LG + ERL ELYG + L YR H I+ SK Y
Sbjct: 318 LGPVIFSKKADEYKLGVSFLERLFKCELYGSGDVNYITKLVRNYRCHPEILYLPSKLFYF 377
Query: 156 SKVL 159
+++
Sbjct: 378 GELM 381
>Medtr2g049990.1 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 940
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 48 VILTTLTGAS---SRKLDHTSFDLVIIDEAAQALEIACWIPLLKGSR----CILAGDHLQ 100
++++T AS + + F + +DEA QA E IP+ R +LAGD LQ
Sbjct: 517 IVVSTYMSASLLFAEDVARGHFSHIFLDEAGQASEPETMIPIAHLCRRDTVVVLAGDPLQ 576
Query: 101 LPPTIQSAEAEKKGLGRTLFERL--AELYGD---EVTSMLTVQYRMHELIMNWSSKELYS 155
L P I S +A++ LG + ERL ELYG + L YR H I+ SK Y
Sbjct: 577 LGPVIFSKKADEYKLGVSFLERLFKCELYGSGDVNYITKLVRNYRCHPEILYLPSKLFYF 636
Query: 156 SKVL 159
+++
Sbjct: 637 GELM 640
>Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:21642650-21636231 |
20130731
Length = 336
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 78 LEIACWIPLL-KGSRCILAGDHLQLPPTIQSAEAEKKGLGRTLFERLAELYGDEVTSMLT 136
+E A +PL K + L GD QLP T+ S A+ G G +LFERL + ML
Sbjct: 46 VEPATLVPLANKCKKVFLVGDPAQLPATVISDIAKNHGYGTSLFERLKQ--AGYPIKMLK 103
Query: 137 VQYRMHELIMNWSSKELYSS 156
QYRMH I ++ S E Y +
Sbjct: 104 TQYRMHPEIRSFPSMEFYDN 123
>Medtr1g038815.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:14386619-14375144 |
20130731
Length = 1545
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 14/97 (14%)
Query: 44 KSADVILTTLTGASSRKLDHTS----FDLVIIDEAAQALEIACWIPLL---------KGS 90
K A ++ T T A+ ++ D +D ++++E+AQ LEI +IP+L +
Sbjct: 1101 KQAKIVAMTCTHAALKRKDFLQLGFKYDNLLMEESAQILEIETFIPMLLQRQEDGHARLK 1160
Query: 91 RCILAGDHLQLPPTIQSAEAEKKG-LGRTLFERLAEL 126
RCIL GDH QLPP +++ +K + ++LF R L
Sbjct: 1161 RCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRL 1197