Miyakogusa Predicted Gene

Lj0g3v0287239.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0287239.2 tr|G7LCI9|G7LCI9_MEDTR Protein kinase 2B
OS=Medicago truncatula GN=MTR_8g008820 PE=3
SV=1,72.73,0.000000000001,no description,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.19184.2
         (47 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g008820.1 | receptor-like kinase plant | HC | chr8:1899290...    52   8e-08
Medtr8g008820.2 | receptor-like kinase plant | HC | chr8:1899290...    52   8e-08

>Medtr8g008820.1 | receptor-like kinase plant | HC |
           chr8:1899290-1903705 | 20130731
          Length = 435

 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 29/44 (65%)

Query: 1   MSNKSLESHLFNKAFDPLPWKTRLEVXXXXXXXXXXXXEDSETQ 44
           M N+SLE+HLFNK++DP+PWKTRLE+            E+ E Q
Sbjct: 162 MPNRSLEAHLFNKSYDPVPWKTRLEIALGAAQGLSYLHEELEVQ 205


>Medtr8g008820.2 | receptor-like kinase plant | HC |
           chr8:1899290-1903705 | 20130731
          Length = 435

 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 29/44 (65%)

Query: 1   MSNKSLESHLFNKAFDPLPWKTRLEVXXXXXXXXXXXXEDSETQ 44
           M N+SLE+HLFNK++DP+PWKTRLE+            E+ E Q
Sbjct: 162 MPNRSLEAHLFNKSYDPVPWKTRLEIALGAAQGLSYLHEELEVQ 205