Miyakogusa Predicted Gene

Lj0g3v0287209.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0287209.2 Non Characterized Hit- tr|I1KFJ4|I1KFJ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39742
PE,79.64,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; SISTER CHROMATID
COHESION PROTEIN DCC1-RELATED,NULL; DUF2036,Sis,CUFF.19183.2
         (395 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0103s0100.1 | sister chromatid cohesion protein DCC1 | HC |...   595   e-170

>Medtr0103s0100.1 | sister chromatid cohesion protein DCC1 | HC |
           scaffold0103:51299-48124 | 20130731
          Length = 398

 Score =  595 bits (1533), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 293/398 (73%), Positives = 332/398 (83%), Gaps = 3/398 (0%)

Query: 1   MEP-PLRASGGAEVLKNMSPGSSISVAYHPLFGPHDDLIFXXXXXXXXXXXXHERVVLRG 59
           MEP P + SGGAE L++MSPGSSISVAYHP FG HDDLI             +ER+VLRG
Sbjct: 1   MEPEPQQTSGGAETLRHMSPGSSISVAYHPDFGSHDDLIILELDEKLIPDVLNERMVLRG 60

Query: 60  QPEEDAFLCTPSKTYAMKFVGTSNSVLLVPPANQSEYCDNLQKNDSNSYEEKVVAPVIKV 119
           QP+EDA LCT SKTYAMKFVGTSNSVLLVPPANQSE  +N QKN+SN+ EEKVVA V+KV
Sbjct: 61  QPDEDAVLCTESKTYAMKFVGTSNSVLLVPPANQSESYENQQKNNSNTSEEKVVASVLKV 120

Query: 120 VPGSMELVEVAPRLDKLKLLLSENPYRXXXXXXXXXXXXXAPITGLYSWNDLIDNIQASD 179
           VPGSMEL+EV+PRLDKLKLLLSEN YR                +GLY+WNDLI+NIQASD
Sbjct: 121 VPGSMELIEVSPRLDKLKLLLSENTYRFDENDMENLEEIQESRSGLYNWNDLIENIQASD 180

Query: 180 EELRSGLQAISAVEINGFWRLVDESYMDMILGILLRNSVLNDWSFDALNEDEVMTTLESD 239
           EELR GLQA+SAVEING+WRLVDE+YMDMIL +LL+N VLNDWS +ALNEDEV+  LESD
Sbjct: 181 EELRVGLQALSAVEINGYWRLVDENYMDMILEMLLKNLVLNDWSLNALNEDEVVNMLESD 240

Query: 240 GFPRVLARHCLRVYGEKV--NDFINSCVWKLDEKKVCIHYAKKILKGGKRKLESFMDEWR 297
           GFP+VLARHCL VY +KV  ND + S VWKLDEK+VCIHYA++ILKGGKRKLE+FM+EWR
Sbjct: 241 GFPKVLARHCLHVYAKKVKENDCMQSGVWKLDEKRVCIHYAREILKGGKRKLENFMEEWR 300

Query: 298 QITPDGMQPTFDLVKGEVLTEKVGVDTWVHAFSVSSLPSTPAERFSILFRERPKWEWKDL 357
           + TPD M PTFDL++GEVLTEK+GV+TWV AF VSSLPSTPAERFSILFRER KWEWKDL
Sbjct: 301 KKTPDEMHPTFDLMEGEVLTEKIGVETWVRAFRVSSLPSTPAERFSILFRERAKWEWKDL 360

Query: 358 QPYISDLSVPGLSSEGLLLKYTRKTQPSPDMEPVFSAR 395
           QPYI DL VPGLS+EGLLLKYTRKTQPS + +P+FSAR
Sbjct: 361 QPYIRDLDVPGLSAEGLLLKYTRKTQPSANDDPIFSAR 398