Miyakogusa Predicted Gene
- Lj0g3v0287109.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0287109.1 Non Characterized Hit- tr|I1LDF4|I1LDF4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,29.01,2e-18,seg,NULL,CUFF.19171.1
(321 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g084240.3 | transmembrane protein, putative | HC | chr7:32... 178 6e-45
Medtr7g084240.1 | transmembrane protein, putative | HC | chr7:32... 178 6e-45
Medtr7g084240.2 | transmembrane protein, putative | HC | chr7:32... 178 6e-45
Medtr1g100200.2 | UPF0496 plant-like protein | HC | chr1:4515434... 76 5e-14
Medtr1g100200.3 | UPF0496 plant-like protein | HC | chr1:4515434... 76 5e-14
Medtr1g100200.1 | UPF0496 plant-like protein | HC | chr1:4515488... 74 2e-13
Medtr8g068520.1 | transmembrane protein | LC | chr8:28594708-285... 70 3e-12
Medtr3g114460.1 | transmembrane protein | LC | chr3:53446901-534... 61 2e-09
Medtr1g025960.1 | transmembrane protein | HC | chr1:8356913-8358... 55 1e-07
>Medtr7g084240.3 | transmembrane protein, putative | HC |
chr7:32506389-32504737 | 20130731
Length = 381
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 183/379 (48%), Gaps = 71/379 (18%)
Query: 10 LECWN-----ASPSKSSTALSPNSSTQEYTPASTTPSVSREFSLAVHSASYAETRSLIQA 64
LEC + SP L P+S Q+ S++P+VSREF LA+ SY E R++IQ
Sbjct: 5 LECLSFNSLTPSPRNVPPPLPPHSQEQQSPTPSSSPNVSREFDLAIQGPSYNEIRTMIQI 64
Query: 65 A--PPQGQ-------------------------TRLLHPDRELVEQALIRDE-STTHSDL 96
P Q T++L PD V + L + +T + L
Sbjct: 65 PLQPHNIQIQQHEVQELEDDEEEDEDSQHRNILTQVLQPDANSVRETLANSKPKSTLTRL 124
Query: 97 ISKYFDHSETASELCLHLHQHAELARAMYAPLLDLFALM--------EPSCDRAFILFLE 148
+S YFDHSET S LCL L + AR MY P+ DL +++ +P CD A+ LF+E
Sbjct: 125 VSSYFDHSETTSHLCLILFRTVNRAREMYNPVFDLISVLPADCSSLSQPQCDTAYDLFVE 184
Query: 149 FDNRDNPLPNSHTFGDIRSALSVLK--TQLDKRFLKSRSRVGLIRRXXXXXXXXXXXXXX 206
F+ +NP H F +R++ S LK QLD+R K + R+ L R
Sbjct: 185 FNVHENPFIFPH-FNTLRNSFSDLKHEIQLDRR--KCQHRIRLFRGANVGCAVCVLATVS 241
Query: 207 LRNPDAT------------------------ENRELAGLAQLDATAKCAYVLSNDLGTID 242
+ A + +ELA L QLDA +V+ N + TID
Sbjct: 242 IAVVTAVIVATHASIGFTSMVPFCIPFQKRRKKKELARLKQLDAAESGTFVV-NHVNTID 300
Query: 243 SLVARLRAAVEGDKALVXXXXXXXXXXFTVQEVLKQLSKSHGSFLQQLEDLEEHICLCFY 302
SLV RL+ AVEGDKA V +QEV+KQL K+ F Q L+DLE+HI LCFY
Sbjct: 301 SLVDRLQTAVEGDKAYVRFALERGRDRHPIQEVIKQLRKTQPIFEQLLKDLEQHIYLCFY 360
Query: 303 TVNKARSFLLQEICNCQTL 321
TVNKAR LL+EI + QT+
Sbjct: 361 TVNKARGALLKEISHHQTV 379
>Medtr7g084240.1 | transmembrane protein, putative | HC |
chr7:32506389-32504005 | 20130731
Length = 381
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 183/379 (48%), Gaps = 71/379 (18%)
Query: 10 LECWN-----ASPSKSSTALSPNSSTQEYTPASTTPSVSREFSLAVHSASYAETRSLIQA 64
LEC + SP L P+S Q+ S++P+VSREF LA+ SY E R++IQ
Sbjct: 5 LECLSFNSLTPSPRNVPPPLPPHSQEQQSPTPSSSPNVSREFDLAIQGPSYNEIRTMIQI 64
Query: 65 A--PPQGQ-------------------------TRLLHPDRELVEQALIRDE-STTHSDL 96
P Q T++L PD V + L + +T + L
Sbjct: 65 PLQPHNIQIQQHEVQELEDDEEEDEDSQHRNILTQVLQPDANSVRETLANSKPKSTLTRL 124
Query: 97 ISKYFDHSETASELCLHLHQHAELARAMYAPLLDLFALM--------EPSCDRAFILFLE 148
+S YFDHSET S LCL L + AR MY P+ DL +++ +P CD A+ LF+E
Sbjct: 125 VSSYFDHSETTSHLCLILFRTVNRAREMYNPVFDLISVLPADCSSLSQPQCDTAYDLFVE 184
Query: 149 FDNRDNPLPNSHTFGDIRSALSVLK--TQLDKRFLKSRSRVGLIRRXXXXXXXXXXXXXX 206
F+ +NP H F +R++ S LK QLD+R K + R+ L R
Sbjct: 185 FNVHENPFIFPH-FNTLRNSFSDLKHEIQLDRR--KCQHRIRLFRGANVGCAVCVLATVS 241
Query: 207 LRNPDAT------------------------ENRELAGLAQLDATAKCAYVLSNDLGTID 242
+ A + +ELA L QLDA +V+ N + TID
Sbjct: 242 IAVVTAVIVATHASIGFTSMVPFCIPFQKRRKKKELARLKQLDAAESGTFVV-NHVNTID 300
Query: 243 SLVARLRAAVEGDKALVXXXXXXXXXXFTVQEVLKQLSKSHGSFLQQLEDLEEHICLCFY 302
SLV RL+ AVEGDKA V +QEV+KQL K+ F Q L+DLE+HI LCFY
Sbjct: 301 SLVDRLQTAVEGDKAYVRFALERGRDRHPIQEVIKQLRKTQPIFEQLLKDLEQHIYLCFY 360
Query: 303 TVNKARSFLLQEICNCQTL 321
TVNKAR LL+EI + QT+
Sbjct: 361 TVNKARGALLKEISHHQTV 379
>Medtr7g084240.2 | transmembrane protein, putative | HC |
chr7:32506389-32504005 | 20130731
Length = 381
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 183/379 (48%), Gaps = 71/379 (18%)
Query: 10 LECWN-----ASPSKSSTALSPNSSTQEYTPASTTPSVSREFSLAVHSASYAETRSLIQA 64
LEC + SP L P+S Q+ S++P+VSREF LA+ SY E R++IQ
Sbjct: 5 LECLSFNSLTPSPRNVPPPLPPHSQEQQSPTPSSSPNVSREFDLAIQGPSYNEIRTMIQI 64
Query: 65 A--PPQGQ-------------------------TRLLHPDRELVEQALIRDE-STTHSDL 96
P Q T++L PD V + L + +T + L
Sbjct: 65 PLQPHNIQIQQHEVQELEDDEEEDEDSQHRNILTQVLQPDANSVRETLANSKPKSTLTRL 124
Query: 97 ISKYFDHSETASELCLHLHQHAELARAMYAPLLDLFALM--------EPSCDRAFILFLE 148
+S YFDHSET S LCL L + AR MY P+ DL +++ +P CD A+ LF+E
Sbjct: 125 VSSYFDHSETTSHLCLILFRTVNRAREMYNPVFDLISVLPADCSSLSQPQCDTAYDLFVE 184
Query: 149 FDNRDNPLPNSHTFGDIRSALSVLK--TQLDKRFLKSRSRVGLIRRXXXXXXXXXXXXXX 206
F+ +NP H F +R++ S LK QLD+R K + R+ L R
Sbjct: 185 FNVHENPFIFPH-FNTLRNSFSDLKHEIQLDRR--KCQHRIRLFRGANVGCAVCVLATVS 241
Query: 207 LRNPDAT------------------------ENRELAGLAQLDATAKCAYVLSNDLGTID 242
+ A + +ELA L QLDA +V+ N + TID
Sbjct: 242 IAVVTAVIVATHASIGFTSMVPFCIPFQKRRKKKELARLKQLDAAESGTFVV-NHVNTID 300
Query: 243 SLVARLRAAVEGDKALVXXXXXXXXXXFTVQEVLKQLSKSHGSFLQQLEDLEEHICLCFY 302
SLV RL+ AVEGDKA V +QEV+KQL K+ F Q L+DLE+HI LCFY
Sbjct: 301 SLVDRLQTAVEGDKAYVRFALERGRDRHPIQEVIKQLRKTQPIFEQLLKDLEQHIYLCFY 360
Query: 303 TVNKARSFLLQEICNCQTL 321
TVNKAR LL+EI + QT+
Sbjct: 361 TVNKARGALLKEISHHQTV 379
>Medtr1g100200.2 | UPF0496 plant-like protein | HC |
chr1:45154345-45156067 | 20130731
Length = 344
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 139/342 (40%), Gaps = 43/342 (12%)
Query: 13 WNASPSKSSTALSPNSSTQEYTPASTTPSVSREFSLAVHSASYAETRSLIQAAPPQGQTR 72
W++SP+ + +EY A T S ++ V ++ + RS + TR
Sbjct: 3 WSSSPNHQTHV----DVREEYANAFRTESYVEFWTRVVSYSNGPQRRSCLSREESTTSTR 58
Query: 73 L----------LHPDRELVEQALIRDESTTH-SDLISKYFDHSETASELCLHLHQHAELA 121
L L PD+ V Q L + + L+ YF ++ AS LC HL + +
Sbjct: 59 LPSYRLFAEHLLDPDQPTVTQILTQTKLQPEIQSLLLDYFAYTSNASVLCSHLLKDIDGV 118
Query: 122 RAMYAPL---LDLFALMEPSCDRAFILFLEFDNRDNPLPNSH-TFGDIRSAL---SVLKT 174
R Y L L + + +EF N NP S + +RS L S L+
Sbjct: 119 RVKYRSLNTILQCVTTNQIPSPKVVAHLIEFSNSLNPFSTSGPSPCRVRSTLCQCSELQK 178
Query: 175 QLDKRFLKSRSR--------------VGLIRRXXXXXXXXXXXXXXLRNP-----DATEN 215
QL+ +R++ V +I + P +
Sbjct: 179 QLESSRDNARAKLKMVTMFEHCSTCVVVVITASLVVLVMAHGFALLVAMPGLALMNLGSK 238
Query: 216 RELAGL-AQLDATAKCAYVLSNDLGTIDSLVARLRAAVEGDKALVXXXXXXXXXXFTVQ- 273
R+L + AQLDA AK Y+L+ DL T LVARL E + +V V
Sbjct: 239 RKLTKVTAQLDAAAKGTYILNKDLETTSRLVARLNDEFEHIRTMVKFWLERKEDKIQVDG 298
Query: 274 EVLKQLSKSHGSFLQQLEDLEEHICLCFYTVNKARSFLLQEI 315
EV + L K+ +F L++LEEH+ LCF T+N+AR +L +I
Sbjct: 299 EVGRLLKKNQCNFSDLLDELEEHVYLCFMTINRARDLVLNQI 340
>Medtr1g100200.3 | UPF0496 plant-like protein | HC |
chr1:45154345-45156067 | 20130731
Length = 364
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 136/335 (40%), Gaps = 44/335 (13%)
Query: 25 SPNSST-----QEYTPASTTPSVSREFSLAVHSASYAETRSLIQAAPPQGQTRL------ 73
SPN T +EY A T S ++ V ++ + RS + TRL
Sbjct: 26 SPNHQTHVDVREEYANAFRTESYVEFWTRVVSYSNGPQRRSCLSREESTTSTRLPSYRLF 85
Query: 74 ----LHPDRELVEQALIRDESTTH-SDLISKYFDHSETASELCLHLHQHAELARAMYAPL 128
L PD+ V Q L + + L+ YF ++ AS LC HL + + R Y L
Sbjct: 86 AEHLLDPDQPTVTQILTQTKLQPEIQSLLLDYFAYTSNASVLCSHLLKDIDGVRVKYRSL 145
Query: 129 ---LDLFALMEPSCDRAFILFLEFDNRDNPLPNSH-TFGDIRSAL---SVLKTQLDKRFL 181
L + + +EF N NP S + +RS L S L+ QL+
Sbjct: 146 NTILQCVTTNQIPSPKVVAHLIEFSNSLNPFSTSGPSPCRVRSTLCQCSELQKQLESSRD 205
Query: 182 KSRSR--------------VGLIRRXXXXXXXXXXXXXXLRNP-----DATENRELAGL- 221
+R++ V +I + P + R+L +
Sbjct: 206 NARAKLKMVTMFEHCSTCVVVVITASLVVLVMAHGFALLVAMPGLALMNLGSKRKLTKVT 265
Query: 222 AQLDATAKCAYVLSNDLGTIDSLVARLRAAVEGDKALVXXXXXXXXXXFTVQ-EVLKQLS 280
AQLDA AK Y+L+ DL T LVARL E + +V V EV + L
Sbjct: 266 AQLDAAAKGTYILNKDLETTSRLVARLNDEFEHIRTMVKFWLERKEDKIQVDGEVGRLLK 325
Query: 281 KSHGSFLQQLEDLEEHICLCFYTVNKARSFLLQEI 315
K+ +F L++LEEH+ LCF T+N+AR +L +I
Sbjct: 326 KNQCNFSDLLDELEEHVYLCFMTINRARDLVLNQI 360
>Medtr1g100200.1 | UPF0496 plant-like protein | HC |
chr1:45154883-45155993 | 20130731
Length = 341
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 132/324 (40%), Gaps = 39/324 (12%)
Query: 31 QEYTPASTTPSVSREFSLAVHSASYAETRSLIQAAPPQGQTRL----------LHPDREL 80
+EY A T S ++ V ++ + RS + TRL L PD+
Sbjct: 14 EEYANAFRTESYVEFWTRVVSYSNGPQRRSCLSREESTTSTRLPSYRLFAEHLLDPDQPT 73
Query: 81 VEQALIRDESTTH-SDLISKYFDHSETASELCLHLHQHAELARAMYAPL---LDLFALME 136
V Q L + + L+ YF ++ AS LC HL + + R Y L L +
Sbjct: 74 VTQILTQTKLQPEIQSLLLDYFAYTSNASVLCSHLLKDIDGVRVKYRSLNTILQCVTTNQ 133
Query: 137 PSCDRAFILFLEFDNRDNPLPNSH-TFGDIRSAL---SVLKTQLDKRFLKSRSR------ 186
+ +EF N NP S + +RS L S L+ QL+ +R++
Sbjct: 134 IPSPKVVAHLIEFSNSLNPFSTSGPSPCRVRSTLCQCSELQKQLESSRDNARAKLKMVTM 193
Query: 187 --------VGLIRRXXXXXXXXXXXXXXLRNP-----DATENRELAGL-AQLDATAKCAY 232
V +I + P + R+L + AQLDA AK Y
Sbjct: 194 FEHCSTCVVVVITASLVVLVMAHGFALLVAMPGLALMNLGSKRKLTKVTAQLDAAAKGTY 253
Query: 233 VLSNDLGTIDSLVARLRAAVEGDKALVXXXXXXXXXXFTVQ-EVLKQLSKSHGSFLQQLE 291
+L+ DL T LVARL E + +V V EV + L K+ +F L+
Sbjct: 254 ILNKDLETTSRLVARLNDEFEHIRTMVKFWLERKEDKIQVDGEVGRLLKKNQCNFSDLLD 313
Query: 292 DLEEHICLCFYTVNKARSFLLQEI 315
+LEEH+ LCF T+N+AR +L +I
Sbjct: 314 ELEEHVYLCFMTINRARDLVLNQI 337
>Medtr8g068520.1 | transmembrane protein | LC |
chr8:28594708-28593113 | 20130731
Length = 379
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 223 QLDATAKCAYVLSNDLGTIDSLVARLRAAVEGDK--ALVXXXXXXXXXXFTVQEVLKQLS 280
QLDA AK ++L NDL T+ +V RL VE K A V ++ V+ +
Sbjct: 280 QLDAAAKGVFILINDLDTMSRMVKRLNDEVEHRKIFADVCVKNNVGSKCEILKRVMSEYR 339
Query: 281 KSHGSFLQQLEDLEEHICLCFYTVNKARSFLLQEI 315
SFL QLE+LEEH+ LCF T+NK+R ++Q+I
Sbjct: 340 DQESSFLDQLEELEEHVYLCFLTINKSRRLVMQQI 374
>Medtr3g114460.1 | transmembrane protein | LC |
chr3:53446901-53448037 | 20130731
Length = 378
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 223 QLDATAKCAYVLSNDLGTIDSLVARLRAAVEGDKAL----VXXXXXXXXXXFTVQEVLKQ 278
Q+D AK Y++ NDL T+ +V RL VE + + V ++ VL++
Sbjct: 277 QIDVAAKGVYIVINDLDTMSRMVKRLADEVEHCREVADICVKNYGHGNGRCVILKMVLRE 336
Query: 279 LSKSHGSFLQQLEDLEEHICLCFYTVNKARSFLLQEI 315
+F+ QLE+LEEHI LCF +N++R L+Q+I
Sbjct: 337 FRDCQTNFMDQLEELEEHIYLCFLAINRSRRQLMQKI 373
>Medtr1g025960.1 | transmembrane protein | HC | chr1:8356913-8358551
| 20130731
Length = 369
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 223 QLDATAKCAYVLSNDLGTIDSLVARLRAAVEGDKALVXXXXXXXXXXFTV-QEVLKQLSK 281
QLDA AK ++L NDL T+ +V RL VE K + + + + + S
Sbjct: 270 QLDAAAKGVFILINDLDTMSRMVKRLNDEVEHRKMVAQVCVKNVGSKCEILKRFMSEFSD 329
Query: 282 SHGSFLQQLEDLEEHICLCFYTVNKARSFLLQEI 315
FL +LE+LEEH+ LCF TVNK+R +LQ+I
Sbjct: 330 QESRFLDELEELEEHVYLCFLTVNKSRRLVLQQI 363