Miyakogusa Predicted Gene

Lj0g3v0286969.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0286969.1 Non Characterized Hit- tr|B9RLN5|B9RLN5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,44.29,0.0000009,Presenilin, signal peptide peptidase,
family,Peptidase A22, presenilin signal peptide;
Presenilin,Pe,CUFF.19163.1
         (438 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g087200.1 | presenilin plant-like protein | HC | chr7:3396...   517   e-147
Medtr4g109550.1 | presenilin plant-like protein | HC | chr4:4552...   204   1e-52

>Medtr7g087200.1 | presenilin plant-like protein | HC |
           chr7:33962733-33960774 | 20130731
          Length = 423

 Score =  517 bits (1331), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 296/450 (65%), Positives = 322/450 (71%), Gaps = 39/450 (8%)

Query: 1   MESSVLESIGVEIIGVMSPVSICMFXXXXXXXXXXXXXX-XXXFRTAANLVYAENPSDTT 59
           MESSVLESIGVEIIGVMSPVSICMF                  F TAANLVYAENPSDTT
Sbjct: 1   MESSVLESIGVEIIGVMSPVSICMFLVVLLVYTLSTTSSPETTFTTAANLVYAENPSDTT 60

Query: 60  AQKLEGALLNAVVFVVLIAIVTFLLVLLYYYNCTAFLRHYIRFSAFFVLASMGGSIFLSL 119
           AQKLEGALLNAVVF++LIAIVTFLLVLLYYYNCTAFLR+Y+RFSAFFVLA+MGGSIF++L
Sbjct: 61  AQKLEGALLNAVVFIILIAIVTFLLVLLYYYNCTAFLRNYVRFSAFFVLATMGGSIFINL 120

Query: 120 IQRYSIPLDSPTCFLLLFNFTVVGVLSIFAAGVPILVRQSYMVCLGIIVAAWFTQLPEWT 179
           I+R+SIPLDS T F+ LFNFT+VGVLS+FA  +PI+VRQ YMVCLGI VAAWFT+LPEWT
Sbjct: 121 IERFSIPLDSITFFIFLFNFTIVGVLSVFAEAIPIIVRQCYMVCLGIFVAAWFTKLPEWT 180

Query: 180 TWTXXXXXXXXXXXXXXXPGGPLKLLVELASSRNEELPALVYEARPTVTGG--GSTLGNL 237
           TWT               PGGPLKLLVELASSRNEELPAL+YEARPTV      +  G  
Sbjct: 181 TWTLLVALALYDLVAVLAPGGPLKLLVELASSRNEELPALIYEARPTVAPNSRAAAFGLF 240

Query: 238 VTGVSE---SESSSIELQAVSSVV------RXXXXXXXXSDSGAVVVRVEDLQXXXXXXX 288
           V GVSE   ++SSSIELQ +  V       R              V  VED +       
Sbjct: 241 VAGVSEAQPTQSSSIELQELQVVPIVNMNERDNDIHIEGGGGDDSVAGVEDFRNDEGER- 299

Query: 289 XXXXXXXXXXXXSPLVGNSAMRFDGRQGEIVGDEEMSPLVEMTDMENGREMGRRDDDEEI 348
                       SPLVGN+  R          +EE SPLVE+     G E     + EE 
Sbjct: 300 ------------SPLVGNNGNR----------EEERSPLVEVM----GNERREPREREEF 333

Query: 349 SERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPI 408
           +ERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCR ALPALPI
Sbjct: 334 AERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRHALPALPI 393

Query: 409 SIALGVLFYFLTRLLMEPFIVGTATNLMMF 438
           SIALGVLFYFLTRLLMEPFIVGTATNLMMF
Sbjct: 394 SIALGVLFYFLTRLLMEPFIVGTATNLMMF 423


>Medtr4g109550.1 | presenilin plant-like protein | HC |
           chr4:45527727-45529540 | 20130731
          Length = 458

 Score =  204 bits (520), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 105/221 (47%), Positives = 140/221 (63%), Gaps = 1/221 (0%)

Query: 5   VLESIGVEIIGVMSPVSICMFXXXXXXXXXXXXXXXXXFRTAANLVYAENPSDTTAQKLE 64
           VL+S+G EI+ +++PVSICMF                   T AN+ Y E  SD++  K  
Sbjct: 14  VLDSLGEEIVRIITPVSICMFLVVILVSILNTNDSPT-ISTIANIAYDETTSDSSWDKFL 72

Query: 65  GALLNAVVFVVLIAIVTFLLVLLYYYNCTAFLRHYIRFSAFFVLASMGGSIFLSLIQRYS 124
           GALLN++ FVV++   TF LVLL+Y+ C  FL+ Y+ FS+F VL  +GG I + LIQ +S
Sbjct: 73  GALLNSLSFVVVVTFATFFLVLLFYFRCITFLKLYMAFSSFVVLGFLGGEISIFLIQHFS 132

Query: 125 IPLDSPTCFLLLFNFTVVGVLSIFAAGVPILVRQSYMVCLGIIVAAWFTQLPEWTTWTXX 184
           +P+D  T  ++L NF VVGV ++F + + I V Q Y+V +GI+VA WFT LPEWTTW   
Sbjct: 133 VPVDCITFLVVLCNFAVVGVCAVFMSKMAIFVTQGYLVVIGILVAYWFTMLPEWTTWAML 192

Query: 185 XXXXXXXXXXXXXPGGPLKLLVELASSRNEELPALVYEARP 225
                        P GPL+LLVELA SR+EE+PALVYEARP
Sbjct: 193 VAMALYDLAAVLLPVGPLRLLVELAMSRDEEIPALVYEARP 233



 Score =  138 bits (348), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 67/90 (74%), Positives = 80/90 (88%)

Query: 349 SERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPI 408
           S   IKLGLGDF+FYSVLVGRAAMYD MTVYACYLAII+GLG TL+LL++ ++ALPALP+
Sbjct: 369 SSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGVTLMLLALYQKALPALPV 428

Query: 409 SIALGVLFYFLTRLLMEPFIVGTATNLMMF 438
           S+ALGVLFYFLTRLL+E F+V  + NL+MF
Sbjct: 429 SVALGVLFYFLTRLLLEVFVVQCSLNLLMF 458