Miyakogusa Predicted Gene

Lj0g3v0286629.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0286629.2 CUFF.19122.2
         (249 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g032590.6 | RNA recognition motif, a.k.a. RRM, RBD protein...   334   5e-92
Medtr8g032590.1 | RNA recognition motif, a.k.a. RRM, RBD protein...   334   5e-92
Medtr8g032590.2 | RNA recognition motif, a.k.a. RRM, RBD protein...   266   1e-71
Medtr8g032590.4 | RNA recognition motif, a.k.a. RRM, RBD protein...   266   1e-71
Medtr8g032590.3 | RNA recognition motif, a.k.a. RRM, RBD protein...   254   5e-68
Medtr8g032590.5 | RNA recognition motif, a.k.a. RRM, RBD protein...   254   5e-68
Medtr1g101520.1 | RNA-binding (RRM/RBD/RNP motif) family protein...   251   4e-67
Medtr8g027190.1 | RNA-binding (RRM/RBD/RNP motif) family protein...   223   2e-58
Medtr8g027190.2 | RNA-binding (RRM/RBD/RNP motif) family protein...   223   2e-58
Medtr1g101520.4 | RNA-binding (RRM/RBD/RNP motif) family protein...   183   1e-46
Medtr1g101520.3 | RNA-binding (RRM/RBD/RNP motif) family protein...   183   1e-46
Medtr1g101520.2 | RNA-binding (RRM/RBD/RNP motif) family protein...   183   1e-46
Medtr8g027190.4 | RNA-binding (RRM/RBD/RNP motif) family protein...   171   7e-43
Medtr8g027190.9 | RNA-binding (RRM/RBD/RNP motif) family protein...   171   7e-43
Medtr8g027190.10 | RNA-binding (RRM/RBD/RNP motif) family protei...   171   7e-43
Medtr8g027190.3 | RNA-binding (RRM/RBD/RNP motif) family protein...   171   7e-43
Medtr8g027190.6 | RNA-binding (RRM/RBD/RNP motif) family protein...   169   2e-42
Medtr8g027190.8 | RNA-binding (RRM/RBD/RNP motif) family protein...   169   2e-42
Medtr8g027190.7 | RNA-binding (RRM/RBD/RNP motif) family protein...   169   2e-42
Medtr8g027190.5 | RNA-binding (RRM/RBD/RNP motif) family protein...   169   2e-42
Medtr3g065190.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    67   2e-11
Medtr8g058530.1 | pre-mRNA-splicing factor SF2-like protein | HC...    66   3e-11
Medtr7g108810.1 | pre-mRNA-splicing factor SF2-like protein | HC...    65   6e-11
Medtr1g061870.1 | polyadenylate-binding plant protein, putative ...    62   4e-10
Medtr3g099590.2 | RNA recognition motif, a.k.a. RRM, RBD protein...    59   6e-09
Medtr3g099590.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    59   6e-09
Medtr3g079310.1 | RNA recognition motif (RRM) containing protein...    57   2e-08
Medtr1g088180.1 | ASF/SF2-like pre-mRNA splicing factor SRP32, p...    57   2e-08
Medtr7g112760.1 | pre-mRNA-splicing factor SF2-like protein | HC...    56   3e-08
Medtr7g112760.2 | pre-mRNA-splicing factor SF2-like protein | HC...    56   3e-08
Medtr1g083400.1 | pre-mRNA-splicing factor SF2-like protein | HC...    54   1e-07
Medtr4g085540.1 | polyadenylate-binding protein | HC | chr4:3341...    50   2e-06
Medtr8g074790.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    49   3e-06
Medtr4g068120.2 | flowering time control FPA-like protein | HC |...    49   4e-06
Medtr4g068120.1 | flowering time control FPA-like protein | HC |...    49   4e-06
Medtr3g092580.1 | pre-mRNA-splicing factor SF2-like protein | HC...    49   5e-06
Medtr5g023060.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    48   1e-05

>Medtr8g032590.6 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr8:12497703-12493893 | 20130731
          Length = 294

 Score =  334 bits (856), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 172/246 (69%), Positives = 188/246 (76%), Gaps = 10/246 (4%)

Query: 1   MKPVFCGNLDFDARQSDVERLFRRYGKVERVDMKSGFAFVYMEDERDAEYAIRRLDRTEF 60
           MKP+FCGNLDFDARQSDVERLFR+YGK++RVD+KSGFAF+YMEDERDAEYAIRRLD+TEF
Sbjct: 1   MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSGFAFIYMEDERDAEYAIRRLDQTEF 60

Query: 61  GRKGRRIRVEWTKQERDSRRS-ADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHFDPY 119
           GRKGRRIRVEWTK ERD+RRS  DS+K ++N KPSKTLFIINFDPVHTRTRDLERHFDPY
Sbjct: 61  GRKGRRIRVEWTKAERDNRRSGGDSKKSSTNTKPSKTLFIINFDPVHTRTRDLERHFDPY 120

Query: 120 GKISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVITVEYAIXXXXXXXXXXXXXX 179
           GKISN+RIRRNFAFIQ+E+ E+AT+ALEATNLSKFMDRVITVEYAI              
Sbjct: 121 GKISNLRIRRNFAFIQFETQEEATKALEATNLSKFMDRVITVEYAIRDDDVKRDGYSPDR 180

Query: 180 XXXVXXXXXXXXXXXXXXXXXXXXXXXY---------GHGSNPASRPEPRGSPKYERAES 230
                                      Y         G GSNPASRPEPRGSPKYERAES
Sbjct: 181 RGRGSPDGRYGRGSPDGRYGRGRSPSPYRRGRGSPDYGRGSNPASRPEPRGSPKYERAES 240

Query: 231 PQNGRY 236
           P NGRY
Sbjct: 241 PANGRY 246


>Medtr8g032590.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr8:12497703-12493893 | 20130731
          Length = 294

 Score =  334 bits (856), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 172/246 (69%), Positives = 188/246 (76%), Gaps = 10/246 (4%)

Query: 1   MKPVFCGNLDFDARQSDVERLFRRYGKVERVDMKSGFAFVYMEDERDAEYAIRRLDRTEF 60
           MKP+FCGNLDFDARQSDVERLFR+YGK++RVD+KSGFAF+YMEDERDAEYAIRRLD+TEF
Sbjct: 1   MKPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKSGFAFIYMEDERDAEYAIRRLDQTEF 60

Query: 61  GRKGRRIRVEWTKQERDSRRS-ADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHFDPY 119
           GRKGRRIRVEWTK ERD+RRS  DS+K ++N KPSKTLFIINFDPVHTRTRDLERHFDPY
Sbjct: 61  GRKGRRIRVEWTKAERDNRRSGGDSKKSSTNTKPSKTLFIINFDPVHTRTRDLERHFDPY 120

Query: 120 GKISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVITVEYAIXXXXXXXXXXXXXX 179
           GKISN+RIRRNFAFIQ+E+ E+AT+ALEATNLSKFMDRVITVEYAI              
Sbjct: 121 GKISNLRIRRNFAFIQFETQEEATKALEATNLSKFMDRVITVEYAIRDDDVKRDGYSPDR 180

Query: 180 XXXVXXXXXXXXXXXXXXXXXXXXXXXY---------GHGSNPASRPEPRGSPKYERAES 230
                                      Y         G GSNPASRPEPRGSPKYERAES
Sbjct: 181 RGRGSPDGRYGRGSPDGRYGRGRSPSPYRRGRGSPDYGRGSNPASRPEPRGSPKYERAES 240

Query: 231 PQNGRY 236
           P NGRY
Sbjct: 241 PANGRY 246


>Medtr8g032590.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr8:12495544-12493893 | 20130731
          Length = 283

 Score =  266 bits (680), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 142/212 (66%), Positives = 154/212 (72%), Gaps = 10/212 (4%)

Query: 35  SGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSA-DSRKPASNMKP 93
           +GFAF+YMEDERDAEYAIRRLD+TEFGRKGRRIRVEWTK ERD+RRS  DS+K ++N KP
Sbjct: 24  AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIRVEWTKAERDNRRSGGDSKKSSTNTKP 83

Query: 94  SKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLSK 153
           SKTLFIINFDPVHTRTRDLERHFDPYGKISN+RIRRNFAFIQ+E+ E+AT+ALEATNLSK
Sbjct: 84  SKTLFIINFDPVHTRTRDLERHFDPYGKISNLRIRRNFAFIQFETQEEATKALEATNLSK 143

Query: 154 FMDRVITVEYAIXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXY------ 207
           FMDRVITVEYAI                                         Y      
Sbjct: 144 FMDRVITVEYAIRDDDVKRDGYSPDRRGRGSPDGRYGRGSPDGRYGRGRSPSPYRRGRGS 203

Query: 208 ---GHGSNPASRPEPRGSPKYERAESPQNGRY 236
              G GSNPASRPEPRGSPKYERAESP NGRY
Sbjct: 204 PDYGRGSNPASRPEPRGSPKYERAESPANGRY 235


>Medtr8g032590.4 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr8:12495544-12493893 | 20130731
          Length = 283

 Score =  266 bits (680), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 142/212 (66%), Positives = 154/212 (72%), Gaps = 10/212 (4%)

Query: 35  SGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSA-DSRKPASNMKP 93
           +GFAF+YMEDERDAEYAIRRLD+TEFGRKGRRIRVEWTK ERD+RRS  DS+K ++N KP
Sbjct: 24  AGFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIRVEWTKAERDNRRSGGDSKKSSTNTKP 83

Query: 94  SKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLSK 153
           SKTLFIINFDPVHTRTRDLERHFDPYGKISN+RIRRNFAFIQ+E+ E+AT+ALEATNLSK
Sbjct: 84  SKTLFIINFDPVHTRTRDLERHFDPYGKISNLRIRRNFAFIQFETQEEATKALEATNLSK 143

Query: 154 FMDRVITVEYAIXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXY------ 207
           FMDRVITVEYAI                                         Y      
Sbjct: 144 FMDRVITVEYAIRDDDVKRDGYSPDRRGRGSPDGRYGRGSPDGRYGRGRSPSPYRRGRGS 203

Query: 208 ---GHGSNPASRPEPRGSPKYERAESPQNGRY 236
              G GSNPASRPEPRGSPKYERAESP NGRY
Sbjct: 204 PDYGRGSNPASRPEPRGSPKYERAESPANGRY 235


>Medtr8g032590.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr8:12495283-12493893 | 20130731
          Length = 253

 Score =  254 bits (649), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 137/205 (66%), Positives = 147/205 (71%), Gaps = 10/205 (4%)

Query: 42  MEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSA-DSRKPASNMKPSKTLFII 100
           MEDERDAEYAIRRLD+TEFGRKGRRIRVEWTK ERD+RRS  DS+K ++N KPSKTLFII
Sbjct: 1   MEDERDAEYAIRRLDQTEFGRKGRRIRVEWTKAERDNRRSGGDSKKSSTNTKPSKTLFII 60

Query: 101 NFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVIT 160
           NFDPVHTRTRDLERHFDPYGKISN+RIRRNFAFIQ+E+ E+AT+ALEATNLSKFMDRVIT
Sbjct: 61  NFDPVHTRTRDLERHFDPYGKISNLRIRRNFAFIQFETQEEATKALEATNLSKFMDRVIT 120

Query: 161 VEYAIX---------XXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXYGHGS 211
           VEYAI                                                  YG GS
Sbjct: 121 VEYAIRDDDVKRDGYSPDRRGRGSPDGRYGRGSPDGRYGRGRSPSPYRRGRGSPDYGRGS 180

Query: 212 NPASRPEPRGSPKYERAESPQNGRY 236
           NPASRPEPRGSPKYERAESP NGRY
Sbjct: 181 NPASRPEPRGSPKYERAESPANGRY 205


>Medtr8g032590.5 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr8:12495283-12493893 | 20130731
          Length = 253

 Score =  254 bits (649), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 137/205 (66%), Positives = 147/205 (71%), Gaps = 10/205 (4%)

Query: 42  MEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSA-DSRKPASNMKPSKTLFII 100
           MEDERDAEYAIRRLD+TEFGRKGRRIRVEWTK ERD+RRS  DS+K ++N KPSKTLFII
Sbjct: 1   MEDERDAEYAIRRLDQTEFGRKGRRIRVEWTKAERDNRRSGGDSKKSSTNTKPSKTLFII 60

Query: 101 NFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVIT 160
           NFDPVHTRTRDLERHFDPYGKISN+RIRRNFAFIQ+E+ E+AT+ALEATNLSKFMDRVIT
Sbjct: 61  NFDPVHTRTRDLERHFDPYGKISNLRIRRNFAFIQFETQEEATKALEATNLSKFMDRVIT 120

Query: 161 VEYAIX---------XXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXYGHGS 211
           VEYAI                                                  YG GS
Sbjct: 121 VEYAIRDDDVKRDGYSPDRRGRGSPDGRYGRGSPDGRYGRGRSPSPYRRGRGSPDYGRGS 180

Query: 212 NPASRPEPRGSPKYERAESPQNGRY 236
           NPASRPEPRGSPKYERAESP NGRY
Sbjct: 181 NPASRPEPRGSPKYERAESPANGRY 205


>Medtr1g101520.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr1:45856698-45851996 | 20130731
          Length = 388

 Score =  251 bits (642), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 118/166 (71%), Positives = 144/166 (86%), Gaps = 1/166 (0%)

Query: 1   MKPVFCGNLDFDARQSDVERLFRRYGKVERVDMKSGFAFVYMEDERDAEYAIRRLDRTEF 60
           MK +FCGN ++D R+S++ERLFRRYGKV+RVDMK+GFAF+YMEDERDAE AIR LDR EF
Sbjct: 1   MKAIFCGNFEYDCRESELERLFRRYGKVDRVDMKAGFAFIYMEDERDAEAAIRALDRIEF 60

Query: 61  GRKGRRIRVEWTKQERDSRRSAD-SRKPASNMKPSKTLFIINFDPVHTRTRDLERHFDPY 119
           GRKGRR+RVEWTKQER  RR A+  ++ ++N +PSKTLF+INFD   TRTRDLERHF+PY
Sbjct: 61  GRKGRRLRVEWTKQERGVRRPAERPKRSSANARPSKTLFVINFDTYQTRTRDLERHFEPY 120

Query: 120 GKISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVITVEYAI 165
           GKI ++RIR+NFAF+QYES +DA +ALEATN SK MDRVI+VE+A 
Sbjct: 121 GKIVSVRIRKNFAFVQYESEDDACKALEATNNSKLMDRVISVEFAA 166


>Medtr8g027190.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr8:9557166-9560056 | 20130731
          Length = 249

 Score =  223 bits (567), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 106/165 (64%), Positives = 131/165 (79%), Gaps = 4/165 (2%)

Query: 1   MKPVFCGNLDFDARQSDVERLFRRYGKVERVDMKSGFAFVYMEDERDAEYAIRRLDRTEF 60
           M+PVF GNL++D RQS++ERLF +YG++ERVDMKSGFAFVY EDERDAE AIR LD   F
Sbjct: 1   MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYEDERDAEEAIRALDNIPF 60

Query: 61  GRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHFDPYG 120
           G   RR+ VEW + ER   R  D  KP  N KP+KTLF+INFDP+ TR  D+ERHF PYG
Sbjct: 61  GHDKRRLSVEWARGERGRHR--DGSKP--NQKPTKTLFVINFDPIRTRVSDIERHFKPYG 116

Query: 121 KISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVITVEYAI 165
            + ++RIRRNFAF+QYE+ EDAT+ALE TN+SK +DRV++VEYA+
Sbjct: 117 PLHHVRIRRNFAFVQYETQEDATKALECTNMSKILDRVVSVEYAL 161


>Medtr8g027190.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr8:9557166-9560056 | 20130731
          Length = 249

 Score =  223 bits (567), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 106/165 (64%), Positives = 131/165 (79%), Gaps = 4/165 (2%)

Query: 1   MKPVFCGNLDFDARQSDVERLFRRYGKVERVDMKSGFAFVYMEDERDAEYAIRRLDRTEF 60
           M+PVF GNL++D RQS++ERLF +YG++ERVDMKSGFAFVY EDERDAE AIR LD   F
Sbjct: 1   MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYEDERDAEEAIRALDNIPF 60

Query: 61  GRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHFDPYG 120
           G   RR+ VEW + ER   R  D  KP  N KP+KTLF+INFDP+ TR  D+ERHF PYG
Sbjct: 61  GHDKRRLSVEWARGERGRHR--DGSKP--NQKPTKTLFVINFDPIRTRVSDIERHFKPYG 116

Query: 121 KISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVITVEYAI 165
            + ++RIRRNFAF+QYE+ EDAT+ALE TN+SK +DRV++VEYA+
Sbjct: 117 PLHHVRIRRNFAFVQYETQEDATKALECTNMSKILDRVVSVEYAL 161


>Medtr1g101520.4 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr1:45856661-45851996 | 20130731
          Length = 347

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 106/125 (84%), Gaps = 1/125 (0%)

Query: 42  MEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSAD-SRKPASNMKPSKTLFII 100
           MEDERDAE AIR LDR EFGRKGRR+RVEWTKQER  RR A+  ++ ++N +PSKTLF+I
Sbjct: 1   MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKQERGVRRPAERPKRSSANARPSKTLFVI 60

Query: 101 NFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVIT 160
           NFD   TRTRDLERHF+PYGKI ++RIR+NFAF+QYES +DA +ALEATN SK MDRVI+
Sbjct: 61  NFDTYQTRTRDLERHFEPYGKIVSVRIRKNFAFVQYESEDDACKALEATNNSKLMDRVIS 120

Query: 161 VEYAI 165
           VE+A 
Sbjct: 121 VEFAA 125


>Medtr1g101520.3 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr1:45856661-45851996 | 20130731
          Length = 347

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 106/125 (84%), Gaps = 1/125 (0%)

Query: 42  MEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSAD-SRKPASNMKPSKTLFII 100
           MEDERDAE AIR LDR EFGRKGRR+RVEWTKQER  RR A+  ++ ++N +PSKTLF+I
Sbjct: 1   MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKQERGVRRPAERPKRSSANARPSKTLFVI 60

Query: 101 NFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVIT 160
           NFD   TRTRDLERHF+PYGKI ++RIR+NFAF+QYES +DA +ALEATN SK MDRVI+
Sbjct: 61  NFDTYQTRTRDLERHFEPYGKIVSVRIRKNFAFVQYESEDDACKALEATNNSKLMDRVIS 120

Query: 161 VEYAI 165
           VE+A 
Sbjct: 121 VEFAA 125


>Medtr1g101520.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr1:45856668-45851996 | 20130731
          Length = 347

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 106/125 (84%), Gaps = 1/125 (0%)

Query: 42  MEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSAD-SRKPASNMKPSKTLFII 100
           MEDERDAE AIR LDR EFGRKGRR+RVEWTKQER  RR A+  ++ ++N +PSKTLF+I
Sbjct: 1   MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKQERGVRRPAERPKRSSANARPSKTLFVI 60

Query: 101 NFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLSKFMDRVIT 160
           NFD   TRTRDLERHF+PYGKI ++RIR+NFAF+QYES +DA +ALEATN SK MDRVI+
Sbjct: 61  NFDTYQTRTRDLERHFEPYGKIVSVRIRKNFAFVQYESEDDACKALEATNNSKLMDRVIS 120

Query: 161 VEYAI 165
           VE+A 
Sbjct: 121 VEFAA 125


>Medtr8g027190.4 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr8:9557166-9560056 | 20130731
          Length = 235

 Score =  171 bits (432), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/133 (62%), Positives = 101/133 (75%), Gaps = 4/133 (3%)

Query: 33  MKSGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMK 92
           + SGFAFVY EDERDAE AIR LD   FG   RR+ VEW + ER   R  D  KP  N K
Sbjct: 19  LYSGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWARGERGRHR--DGSKP--NQK 74

Query: 93  PSKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLS 152
           P+KTLF+INFDP+ TR  D+ERHF PYG + ++RIRRNFAF+QYE+ EDAT+ALE TN+S
Sbjct: 75  PTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALECTNMS 134

Query: 153 KFMDRVITVEYAI 165
           K +DRV++VEYA+
Sbjct: 135 KILDRVVSVEYAL 147


>Medtr8g027190.9 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr8:9557166-9560056 | 20130731
          Length = 235

 Score =  171 bits (432), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/133 (62%), Positives = 101/133 (75%), Gaps = 4/133 (3%)

Query: 33  MKSGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMK 92
           + SGFAFVY EDERDAE AIR LD   FG   RR+ VEW + ER   R  D  KP  N K
Sbjct: 19  LYSGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWARGERGRHR--DGSKP--NQK 74

Query: 93  PSKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLS 152
           P+KTLF+INFDP+ TR  D+ERHF PYG + ++RIRRNFAF+QYE+ EDAT+ALE TN+S
Sbjct: 75  PTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALECTNMS 134

Query: 153 KFMDRVITVEYAI 165
           K +DRV++VEYA+
Sbjct: 135 KILDRVVSVEYAL 147


>Medtr8g027190.10 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr8:9557166-9560056 | 20130731
          Length = 235

 Score =  171 bits (432), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/133 (62%), Positives = 101/133 (75%), Gaps = 4/133 (3%)

Query: 33  MKSGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMK 92
           + SGFAFVY EDERDAE AIR LD   FG   RR+ VEW + ER   R  D  KP  N K
Sbjct: 19  LYSGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWARGERGRHR--DGSKP--NQK 74

Query: 93  PSKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLS 152
           P+KTLF+INFDP+ TR  D+ERHF PYG + ++RIRRNFAF+QYE+ EDAT+ALE TN+S
Sbjct: 75  PTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALECTNMS 134

Query: 153 KFMDRVITVEYAI 165
           K +DRV++VEYA+
Sbjct: 135 KILDRVVSVEYAL 147


>Medtr8g027190.3 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr8:9557166-9560056 | 20130731
          Length = 235

 Score =  171 bits (432), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/133 (62%), Positives = 101/133 (75%), Gaps = 4/133 (3%)

Query: 33  MKSGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMK 92
           + SGFAFVY EDERDAE AIR LD   FG   RR+ VEW + ER   R  D  KP  N K
Sbjct: 19  LYSGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWARGERGRHR--DGSKP--NQK 74

Query: 93  PSKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLS 152
           P+KTLF+INFDP+ TR  D+ERHF PYG + ++RIRRNFAF+QYE+ EDAT+ALE TN+S
Sbjct: 75  PTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALECTNMS 134

Query: 153 KFMDRVITVEYAI 165
           K +DRV++VEYA+
Sbjct: 135 KILDRVVSVEYAL 147


>Medtr8g027190.6 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr8:9557166-9560056 | 20130731
          Length = 229

 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/138 (60%), Positives = 101/138 (73%), Gaps = 4/138 (2%)

Query: 28  VERVDMKSGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSADSRKP 87
           V      +GFAFVY EDERDAE AIR LD   FG   RR+ VEW + ER   R  D  KP
Sbjct: 8   VSNFSFVAGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWARGERGRHR--DGSKP 65

Query: 88  ASNMKPSKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALE 147
             N KP+KTLF+INFDP+ TR  D+ERHF PYG + ++RIRRNFAF+QYE+ EDAT+ALE
Sbjct: 66  --NQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALE 123

Query: 148 ATNLSKFMDRVITVEYAI 165
            TN+SK +DRV++VEYA+
Sbjct: 124 CTNMSKILDRVVSVEYAL 141


>Medtr8g027190.8 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr8:9557166-9560056 | 20130731
          Length = 229

 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/138 (60%), Positives = 101/138 (73%), Gaps = 4/138 (2%)

Query: 28  VERVDMKSGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSADSRKP 87
           V      +GFAFVY EDERDAE AIR LD   FG   RR+ VEW + ER   R  D  KP
Sbjct: 8   VSNFSFVAGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWARGERGRHR--DGSKP 65

Query: 88  ASNMKPSKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALE 147
             N KP+KTLF+INFDP+ TR  D+ERHF PYG + ++RIRRNFAF+QYE+ EDAT+ALE
Sbjct: 66  --NQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALE 123

Query: 148 ATNLSKFMDRVITVEYAI 165
            TN+SK +DRV++VEYA+
Sbjct: 124 CTNMSKILDRVVSVEYAL 141


>Medtr8g027190.7 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr8:9557166-9560056 | 20130731
          Length = 229

 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/138 (60%), Positives = 101/138 (73%), Gaps = 4/138 (2%)

Query: 28  VERVDMKSGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSADSRKP 87
           V      +GFAFVY EDERDAE AIR LD   FG   RR+ VEW + ER   R  D  KP
Sbjct: 8   VSNFSFVAGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWARGERGRHR--DGSKP 65

Query: 88  ASNMKPSKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALE 147
             N KP+KTLF+INFDP+ TR  D+ERHF PYG + ++RIRRNFAF+QYE+ EDAT+ALE
Sbjct: 66  --NQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALE 123

Query: 148 ATNLSKFMDRVITVEYAI 165
            TN+SK +DRV++VEYA+
Sbjct: 124 CTNMSKILDRVVSVEYAL 141


>Medtr8g027190.5 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr8:9557166-9560056 | 20130731
          Length = 229

 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/138 (60%), Positives = 101/138 (73%), Gaps = 4/138 (2%)

Query: 28  VERVDMKSGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSADSRKP 87
           V      +GFAFVY EDERDAE AIR LD   FG   RR+ VEW + ER   R  D  KP
Sbjct: 8   VSNFSFVAGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWARGERGRHR--DGSKP 65

Query: 88  ASNMKPSKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALE 147
             N KP+KTLF+INFDP+ TR  D+ERHF PYG + ++RIRRNFAF+QYE+ EDAT+ALE
Sbjct: 66  --NQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALE 123

Query: 148 ATNLSKFMDRVITVEYAI 165
            TN+SK +DRV++VEYA+
Sbjct: 124 CTNMSKILDRVVSVEYAL 141


>Medtr3g065190.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr3:29411645-29406062 | 20130731
          Length = 379

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 77/177 (43%), Gaps = 32/177 (18%)

Query: 5   FCGNLDFDARQSDVERLFRRYGKVERV--------DMKSGFAFVYMEDERDAEYAIRRLD 56
           + GNLD    +  +  LF + G V  V        +   G+ FV    E DA+YAI+ L+
Sbjct: 28  YVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKVLN 87

Query: 57  RTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHF 116
             +    G+ IRV    Q++ S            +     LFI N DP     + L   F
Sbjct: 88  MIKL--YGKPIRVNKASQDKKS------------LDVGANLFIGNLDP-DVDEKLLYDTF 132

Query: 117 DPYGKI-SNIRIRRN--------FAFIQYESLEDATRALEATNLSKFMDRVITVEYA 164
             +G I +N +I R+        F FI Y+S E +  A+EA N     +R ITV YA
Sbjct: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYA 189


>Medtr8g058530.1 | pre-mRNA-splicing factor SF2-like protein | HC |
           chr8:20148291-20144393 | 20130731
          Length = 303

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 4   VFCGNLDFDARQSDVERLFRRYGKVERVDMK-----SGFAFVYMEDERDAEYAIRRLDRT 58
           V+ GNL  D R+ +VE LF +YG +  +D+K      G+AFV  ED +DAE AIR  D  
Sbjct: 9   VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 68

Query: 59  EFGRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTL-------FIINFDPVHTRTRD 111
           +F   G R+RVE     R +  S D     SN +  + +        I+N  P     +D
Sbjct: 69  DF--DGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQD 126

Query: 112 LERHFDPYGKISNIRI----RRNFAFIQYESLEDATRALEATNLSKF 154
           L+ H    G +   ++    R     + Y + +D   A++  + S+F
Sbjct: 127 LKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEF 173


>Medtr7g108810.1 | pre-mRNA-splicing factor SF2-like protein | HC |
           chr7:44331530-44321717 | 20130731
          Length = 401

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 4   VFCGNLDFDARQSDVERLFRRYGKVERVDMK-----SGFAFVYMEDERDAEYAIRRLDRT 58
           V+ GNL  D R+ +VE LF +YG +  +D+K      G+AFV  ED +DAE AIR  D  
Sbjct: 110 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 169

Query: 59  EFGRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTL-------FIINFDPVHTRTRD 111
           +F   G R+RVE     R +  S D     SN +  + +        I+N  P     +D
Sbjct: 170 DF--DGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQD 227

Query: 112 LERHFDPYGKISNIRI----RRNFAFIQYESLEDATRALEATNLSKF 154
           L+ H    G +   ++    R     + Y + +D   A++  + S+F
Sbjct: 228 LKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEF 274


>Medtr1g061870.1 | polyadenylate-binding plant protein, putative |
           HC | chr1:27029234-27025443 | 20130731
          Length = 522

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 24/175 (13%)

Query: 4   VFCGNLDFDARQSDVERLFRRYG-----KVERV-DMKS-GFAFVYMEDERDAEYAIRRLD 56
           VF  NL        +  LF++YG     K+ R  D KS GF ++  + E  A  AI++++
Sbjct: 105 VFVKNLAASIDNVGLHDLFQKYGNILSSKIARSEDGKSKGFGYIQFDSEESANVAIQKMN 164

Query: 57  RTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHF 116
               G   R  ++   K  R S RS     P  + K +  L++ N DPV T  + L   F
Sbjct: 165 ----GSTVRDKQIYVGKFIRKSERSL----PDLDAKFT-NLYVKNLDPVVTE-KHLGEKF 214

Query: 117 DPYGKISNIRIRRN-------FAFIQYESLEDATRALEATNLSKFMDRVITVEYA 164
             +GKI ++ I+++       F F+ Y+S +DA RA+EA + S+F  +++ V  A
Sbjct: 215 SSFGKIVSLAIKKDENGQSKGFGFVNYDSPDDARRAMEAMDGSQFGSKILYVARA 269


>Medtr3g099590.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr3:45657608-45655484 | 20130731
          Length = 290

 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 24/174 (13%)

Query: 4   VFCGNLDFDARQSDVERLFRRYGKVERVDMKS-------GFAFVYMEDERDAEYAIRRLD 56
           +   N+ + +   DV  LF +YGKV  V++         G AFV M    +A  A+  L 
Sbjct: 91  LLAQNVPWSSTTEDVRSLFEKYGKVLHVELSMYNKNRNRGLAFVEMGSPEEASEALNSLQ 150

Query: 57  RTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHF 116
             EF   GR I +++ K +++       RKP +       LF+ NF P   R++D++  F
Sbjct: 151 SYEF--DGRIINIQYAKPKKEKIPPPVERKPIT-----YNLFVANF-PYEARSKDVKEFF 202

Query: 117 DP-YGKISNIRI------RR--NFAFIQYESLEDATRALEATNLSKFMDRVITV 161
           D   GK+ +  +      RR   + F+ Y+S ++A  AL       FM R + V
Sbjct: 203 DSGTGKVVSAEVIFHENPRRPSGYGFVSYKSKKEADEALAEFQGKNFMGRPLRV 256


>Medtr3g099590.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr3:45657608-45655484 | 20130731
          Length = 290

 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 24/174 (13%)

Query: 4   VFCGNLDFDARQSDVERLFRRYGKVERVDMKS-------GFAFVYMEDERDAEYAIRRLD 56
           +   N+ + +   DV  LF +YGKV  V++         G AFV M    +A  A+  L 
Sbjct: 91  LLAQNVPWSSTTEDVRSLFEKYGKVLHVELSMYNKNRNRGLAFVEMGSPEEASEALNSLQ 150

Query: 57  RTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHF 116
             EF   GR I +++ K +++       RKP +       LF+ NF P   R++D++  F
Sbjct: 151 SYEF--DGRIINIQYAKPKKEKIPPPVERKPIT-----YNLFVANF-PYEARSKDVKEFF 202

Query: 117 DP-YGKISNIRI------RR--NFAFIQYESLEDATRALEATNLSKFMDRVITV 161
           D   GK+ +  +      RR   + F+ Y+S ++A  AL       FM R + V
Sbjct: 203 DSGTGKVVSAEVIFHENPRRPSGYGFVSYKSKKEADEALAEFQGKNFMGRPLRV 256


>Medtr3g079310.1 | RNA recognition motif (RRM) containing protein |
           HC | chr3:35657324-35668580 | 20130731
          Length = 928

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 42/201 (20%)

Query: 4   VFCGNLDFDARQSDVERLFRRYGKVERVDMKSG--FAFVYMEDERDAEYAIRRLDRTEFG 61
           ++ GNL  +  + ++   F R+G +E+V  + G  +AF+  E + DA  A+R L    F 
Sbjct: 45  LWVGNLSHNIVEDELAHPFIRFGPLEKVAFQPGRSYAFINFEVDEDAIDAMRSLQG--FL 102

Query: 62  RKGRRIRVEWTKQE------RDSRRSADSRKPA--------------------------- 88
             G  +R+E+ K +      RD   S D R+PA                           
Sbjct: 103 LAGNPLRIEFAKADKPSTVMRDEDYSRDERRPALRGSPFSQREFRGRHGSPEPHYSDKFK 162

Query: 89  ---SNMKPSKTLFIINFDPVHTRTRDLERHFDPYGKISNIRI--RRNFAFIQYESLEDAT 143
               N +PS+ L++     +      L R F P+G+I  I     R++AF++Y S+  A 
Sbjct: 163 LSDKNPEPSEVLWVGFPAQLKVDESILGRAFAPFGEIEKISTFPGRSYAFVRYSSVASAC 222

Query: 144 RALEATNLSKFMDRVITVEYA 164
            AL+A     F +  + + +A
Sbjct: 223 IALDALQGKLFGNPRVHICFA 243


>Medtr1g088180.1 | ASF/SF2-like pre-mRNA splicing factor SRP32,
           putative | LC | chr1:39411452-39402479 | 20130731
          Length = 448

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 18/169 (10%)

Query: 4   VFCGNLDFDARQSDVERLFRRYGKVERVDMK-----SGFAFVYMEDERDAEYAIRRLDRT 58
           V+ GNL  D R+ +V+ LF +YG + R+D+K       +AFV  +D  +A+ AI   D  
Sbjct: 9   VYVGNLPGDIREREVKHLFMKYGHITRIDLKVPPRPPCYAFVVFKDALNADDAICECDGY 68

Query: 59  EFGRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTL-------FIINFDPVHTRTRD 111
           +F   G R+RVE       +  S D     SN +  + +        ++N  P     +D
Sbjct: 69  DF--DGCRLRVEAAHVGYCNSSSRDRYSIHSNGQGGRGVSSHSEYRVLVNRLPSSASCQD 126

Query: 112 LERHFDPYGKISNIRI----RRNFAFIQYESLEDATRALEATNLSKFMD 156
           L+ H    G +   ++    R     + Y + +D   A++  + S+F +
Sbjct: 127 LKDHMRKAGAVCFSQVVHDGRVTTGIVDYTNCDDMKYAIKNLDGSEFQN 175


>Medtr7g112760.1 | pre-mRNA-splicing factor SF2-like protein | HC |
           chr7:46405226-46398545 | 20130731
          Length = 292

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 16/167 (9%)

Query: 2   KPVFCGNLDFDARQSDVERLFRRYGKVERVDMK-----SGFAFVYMEDERDAEYAIRRLD 56
           + ++ GNL  D R  +VE LF ++G +  +++K      G+AFV  ED RDAE AIR  D
Sbjct: 7   RTIYVGNLPGDIRLREVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAEDAIRYRD 66

Query: 57  RTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNM-----KPSKTLFIINFDPVHTRTRD 111
             +F   G R+RVE     R    S D     S+      K S+   ++   P     +D
Sbjct: 67  GYKF--DGFRLRVELAHGGRGYSSSVDRYSSYSSGSRGVSKHSEYRVLVTGLPPSASWQD 124

Query: 112 LERHFDPYGKISNIRIRRN----FAFIQYESLEDATRALEATNLSKF 154
           L+ H    G +   ++ R+       ++Y + ED   A+   + S+F
Sbjct: 125 LKDHMRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIRKLDDSEF 171


>Medtr7g112760.2 | pre-mRNA-splicing factor SF2-like protein | HC |
           chr7:46405206-46401029 | 20130731
          Length = 252

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 16/167 (9%)

Query: 2   KPVFCGNLDFDARQSDVERLFRRYGKVERVDMK-----SGFAFVYMEDERDAEYAIRRLD 56
           + ++ GNL  D R  +VE LF ++G +  +++K      G+AFV  ED RDAE AIR  D
Sbjct: 7   RTIYVGNLPGDIRLREVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAEDAIRYRD 66

Query: 57  RTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNM-----KPSKTLFIINFDPVHTRTRD 111
             +F   G R+RVE     R    S D     S+      K S+   ++   P     +D
Sbjct: 67  GYKF--DGFRLRVELAHGGRGYSSSVDRYSSYSSGSRGVSKHSEYRVLVTGLPPSASWQD 124

Query: 112 LERHFDPYGKISNIRIRRN----FAFIQYESLEDATRALEATNLSKF 154
           L+ H    G +   ++ R+       ++Y + ED   A+   + S+F
Sbjct: 125 LKDHMRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIRKLDDSEF 171


>Medtr1g083400.1 | pre-mRNA-splicing factor SF2-like protein | HC |
           chr1:37124801-37119597 | 20130731
          Length = 290

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 18/169 (10%)

Query: 2   KPVFCGNLDFDARQSDVERLFRRYGKVERVDMK-----SGFAFVYMEDERDAEYAIRRLD 56
           + ++ GNL  D R  +VE LF +YG +  +D+K      G+AFV  ED RDA+ AI   D
Sbjct: 38  RTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRD 97

Query: 57  RTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTL-------FIINFDPVHTRT 109
             +F   G R+ VE     R S  S D     S    S+ +        ++   P     
Sbjct: 98  GYDF--DGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASW 155

Query: 110 RDLERHFDPYGKISNIRIRRN----FAFIQYESLEDATRALEATNLSKF 154
           +DL+ H    G +   ++ R        + Y + +D   A+   + S+F
Sbjct: 156 QDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEF 204


>Medtr4g085540.1 | polyadenylate-binding protein | HC |
           chr4:33416965-33423437 | 20130731
          Length = 654

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)

Query: 4   VFCGNLDFDARQSDVERLFRRYGK-------VERVDMKSGFAFVYMEDERDAEYAIRRLD 56
           +F  NLD       +   F  +G        V+      G+ FV  + E  A+ AI +L+
Sbjct: 124 IFIKNLDKAIDHKALHDTFSSFGNILSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLN 183

Query: 57  RTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHF 116
                 K   +     KQER+S  + D  K          +F+ N     T   +L++ F
Sbjct: 184 GMLLNDKQVYVGPFLRKQERES--TGDRAK-------FNNVFVKNLSE-STTDDELKKTF 233

Query: 117 DPYGKISNIRIRRN-------FAFIQYESLEDATRALEATNLSKFMDR 157
             +G I++  + R+       F F+ +ES +DA RA+EA N  K  D+
Sbjct: 234 GEFGTITSAVVMRDGDGKSKCFGFVNFESTDDAARAVEALNGKKIDDK 281


>Medtr8g074790.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           HC | chr8:31620260-31623626 | 20130731
          Length = 270

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 9/80 (11%)

Query: 91  MKPSKTLFIINFDPVHTRTRDLERHFDPYGKISNI--------RIRRNFAFIQYESLEDA 142
             P  TL++       T  RDLE HF   GK+++         RI R FAF+  +S EDA
Sbjct: 58  TNPGNTLYVTGLSSRVT-DRDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSHEDA 116

Query: 143 TRALEATNLSKFMDRVITVE 162
            R ++  N S    R ITVE
Sbjct: 117 ERCIKHLNQSVLEGRYITVE 136


>Medtr4g068120.2 | flowering time control FPA-like protein | HC |
           chr4:25458538-25448035 | 20130731
          Length = 973

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 23/151 (15%)

Query: 4   VFCGNLDFDARQSDVERLFRRYGKVERVDMKSG--FAFVYMEDERDAEYAIRRLDRTEFG 61
           ++  NL  D   SD+  LF +YG ++ V   S   +AFV+ +   DA+ A   L    F 
Sbjct: 29  LYVANLSPDVTDSDLMDLFVQYGALDSVTSYSARNYAFVFFKRIDDAKAAKNALQGFNF- 87

Query: 62  RKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHFDPYGK 121
            +G  +R+E+              +PA   K  K L++    P  T+  DLE  F  +GK
Sbjct: 88  -RGNSLRIEFA-------------RPA---KTCKQLWVGGISPAVTK-EDLEADFRKFGK 129

Query: 122 ISNIRI--RRNFAFIQYESLEDATRALEATN 150
           + + +    RN A +++ +L+DA +A++  N
Sbjct: 130 VEDFKFFRDRNTACVEFFNLDDAIQAMKIMN 160


>Medtr4g068120.1 | flowering time control FPA-like protein | HC |
           chr4:25458538-25450507 | 20130731
          Length = 973

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 23/151 (15%)

Query: 4   VFCGNLDFDARQSDVERLFRRYGKVERVDMKSG--FAFVYMEDERDAEYAIRRLDRTEFG 61
           ++  NL  D   SD+  LF +YG ++ V   S   +AFV+ +   DA+ A   L    F 
Sbjct: 29  LYVANLSPDVTDSDLMDLFVQYGALDSVTSYSARNYAFVFFKRIDDAKAAKNALQGFNF- 87

Query: 62  RKGRRIRVEWTKQERDSRRSADSRKPASNMKPSKTLFIINFDPVHTRTRDLERHFDPYGK 121
            +G  +R+E+              +PA   K  K L++    P  T+  DLE  F  +GK
Sbjct: 88  -RGNSLRIEFA-------------RPA---KTCKQLWVGGISPAVTK-EDLEADFRKFGK 129

Query: 122 ISNIRI--RRNFAFIQYESLEDATRALEATN 150
           + + +    RN A +++ +L+DA +A++  N
Sbjct: 130 VEDFKFFRDRNTACVEFFNLDDAIQAMKIMN 160


>Medtr3g092580.1 | pre-mRNA-splicing factor SF2-like protein | HC |
           chr3:42306430-42301242 | 20130731
          Length = 380

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 7/74 (9%)

Query: 2   KPVFCGNLDFDARQSDVERLFRRYGKVERVDMKS-----GFAFVYMEDERDAEYAIRRLD 56
           + ++ GNL  D R+S++E LF +YG++  +++K       + FV  ++ RDAE AIR  D
Sbjct: 114 RTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRD 173

Query: 57  RTEFGRKGRRIRVE 70
              F   G R+RVE
Sbjct: 174 GYNF--DGCRLRVE 185


>Medtr5g023060.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
           HC | chr5:9164769-9167836 | 20130731
          Length = 303

 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 9/75 (12%)

Query: 96  TLFIINFDPVHTRTRDLERHFDPYGKISNI--------RIRRNFAFIQYESLEDATRALE 147
           TL++       T  RDLE HF   GK+++         RI R FAF+  ++ EDA R ++
Sbjct: 132 TLYVTGLSSRVT-ERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDTAEDANRCIK 190

Query: 148 ATNLSKFMDRVITVE 162
             N S    R ITVE
Sbjct: 191 YLNQSILEGRYITVE 205