Miyakogusa Predicted Gene

Lj0g3v0286539.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0286539.2 Non Characterized Hit- tr|J3M9R3|J3M9R3_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G3,29.48,6e-17,seg,NULL,CUFF.19130.2
         (412 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g079100.1 | hypothetical protein | HC | chr4:30531357-3053...   360   e-99 

>Medtr4g079100.1 | hypothetical protein | HC |
           chr4:30531357-30537508 | 20130731
          Length = 411

 Score =  360 bits (925), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 243/431 (56%), Positives = 286/431 (66%), Gaps = 39/431 (9%)

Query: 1   MDVKALAKSKRAHTQHHTKKSHGNHNAQ----------TTNDAAKVPLGKQQVIEKKTHH 50
           MDVK+LAKSKR HTQH+ KK H NH  +          ++++  +    K++ IEKKT+ 
Sbjct: 1   MDVKSLAKSKRNHTQHN-KKHHANHKPKLQPQSHSPFPSSSNPNQNGAVKERAIEKKTNR 59

Query: 51  PRAQGSSALPTNWDRYEEEGLDS-GLVGIS--DDVVPKSKGADFRHLVAEAQSQAENTFQ 107
            + + SSALP NWDRYEEE LDS   +G    D VVPKSKGADFR LVAEAQS A+ T  
Sbjct: 60  SK-RDSSALPGNWDRYEEEELDSVPEIGSKTLDVVVPKSKGADFRFLVAEAQSNADKTLD 118

Query: 108 GSPSFDELLPWEYGVGFGSMLAVRGEGMLSWVGDDNFVVEDKATANHEVSFTSLNLHAIA 167
           G   F+E LPWE+GVG  S+L VRGEG++SWVGDDNFVV+DK +A  E SF SLNLHAIA
Sbjct: 119 G---FNEALPWEFGVGLSSILEVRGEGIVSWVGDDNFVVQDKTSAYQEASFISLNLHAIA 175

Query: 168 EALAKVDLSKKLFIESDLLPTELG------GNEEPDDLKTTEDTELANRMSKDLNLDDFA 221
           E LAKVDLSK+LFIE DLLP+EL        ++EP   +T ED ELANRMSK+LNLD+FA
Sbjct: 176 EKLAKVDLSKRLFIEPDLLPSELCVEDLAVSSDEPGVHETAEDCELANRMSKELNLDNFA 235

Query: 222 ADQFGXXXXXXXXXXAPSTFTLSNDFMVPVNYVNDEFQHVGSSGKMKSCLPSAEGNLHST 281
           ADQF           A ST  LS+DF++PV+ +N EFQ VGSSG+ K+  PSAE NLHS 
Sbjct: 236 ADQFTSSSSCSSSHAA-STPALSDDFLIPVSNINVEFQQVGSSGENKAFQPSAETNLHSI 294

Query: 282 KDKTGKQPTFEAATAEKELDMLLDSLGETKILDSTGVKSNAGFPVSLGASLVDPSQISYQ 341
           +D   K  TFEA   E++LDMLLDSL  T        KS+A F V LG    D  QIS +
Sbjct: 295 EDTAVKHSTFEATAVEEDLDMLLDSLDVT--------KSSASFTVPLG----DLPQISNK 342

Query: 342 EPATSETASVTASIDDALDDLLEETSTLMNPNVSLRRPQEEKPVTQXXXXXXXXXXXXXX 401
           EP  S  ASVTAS+DDALDDLLEETSTLM PNV L  PQEEK V                
Sbjct: 343 EPVQSRIASVTASLDDALDDLLEETSTLMKPNV-LSWPQEEKHV-HHSILSSHSQNKSKV 400

Query: 402 XDDFDSWFDTL 412
            DDFDSWFD+L
Sbjct: 401 SDDFDSWFDSL 411