Miyakogusa Predicted Gene

Lj0g3v0286309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0286309.1 Non Characterized Hit- tr|G7IL01|G7IL01_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,36.18,0.000000004, ,CUFF.19098.1
         (154 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g032740.1 | hypothetical protein | LC | chr2:12339667-1233...    66   1e-11
Medtr2g032720.1 | hypothetical protein | LC | chr2:12327038-1232...    62   2e-10
Medtr2g032860.1 | transmembrane protein, putative | LC | chr2:12...    62   2e-10

>Medtr2g032740.1 | hypothetical protein | LC |
           chr2:12339667-12338630 | 20130731
          Length = 345

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 69/152 (45%), Gaps = 14/152 (9%)

Query: 4   PALLVTFGCCVLVLFKDFDYWDNSTYETFMTKSIRQLQESAGHDTTIPDVKNPFSLKYAR 63
           P +LV F CC+++L K F   D   Y TFM + I +L+E  G+D    D+  PF  K A 
Sbjct: 124 PFILVNFACCIIMLLKKFT--DEINYHTFMIEFINELKEIIGYDA---DLDFPFDFKSAN 178

Query: 64  LISNTLGEVLSLRARLIKHFGATKGI-----DLFTGVHRCLLAQIL-WSRMESFRLIKDW 117
            I   LG    L    I+ F   KGI     D   GV    L  +L WS M  F LI D 
Sbjct: 179 AIRTNLGGSSRLCQDTIR-FIMKKGIHSVETDEEIGVVCQYLYNVLAWSEMRHFILINDM 237

Query: 118 LFRPDEPSRAIRDRRVSEEVELMRKAIETFDS 149
           L +   P     D RVS+EV    +A     S
Sbjct: 238 LVKAKSP--VFFDPRVSKEVNDFTEACRAIKS 267


>Medtr2g032720.1 | hypothetical protein | LC |
           chr2:12327038-12325842 | 20130731
          Length = 398

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 4   PALLVTFGCCVLVLFKDFDYWDNSTYETFMTKSIRQLQESAGHDTTIPDVK--NPFSLKY 61
           P++LV FGCC++VLFK+F   +  +Y  FMT SIR+L+  A  D   PD     PF    
Sbjct: 103 PSILVYFGCCIIVLFKEFTTEE--SYNIFMTNSIRELRVRAKCD---PDATFGVPFDYNK 157

Query: 62  ARLISNTLGEVLSLRARLIKHFGATKGIDLFTGVHRC-LLAQIL-WSRMESFRLIKDWLF 119
           A  I   +G    L    IK        +       C  L  +L W  M    L+ ++L 
Sbjct: 158 ATAIRTMIGGCSLLCKEAIKFLFKYMNCESSAIGPICHYLGNLLAWVDMRHLVLMNNFLI 217

Query: 120 RPDEPSRAIRDRRVSEEVELMRKAI 144
            P  P   + D RVS EVE +  AI
Sbjct: 218 MPKSP--VLEDPRVSREVENLEAAI 240


>Medtr2g032860.1 | transmembrane protein, putative | LC |
           chr2:12393542-12392508 | 20130731
          Length = 344

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 14/152 (9%)

Query: 4   PALLVTFGCCVLVLFKDFDYWDNSTYETFMTKSIRQLQESAGHDTTIPDVKNPFSLKYAR 63
           P +LV FGC +++L K+F   D   ++TFM K I +L+E  G+D    D+  PF  K A 
Sbjct: 126 PFILVNFGCIIIMLLKNFT--DERNFKTFMIKLISELKEIIGYDA---DLDFPFDFKRAT 180

Query: 64  LISNTLGEVLSLRARLIKHFGATKGIDL------FTGVHRCLLAQILWSRMESFRLIKDW 117
            I   LG    L    I+ F   K  D          V++ L  ++ W+ M  F LI D 
Sbjct: 181 AIRANLGSCSRLCQDAIR-FIMKKSNDSVERDQELGVVYQYLCNELSWTDMHHFTLINDL 239

Query: 118 LFRPDEPSRAIRDRRVSEEVELMRKAIETFDS 149
           L +P  P        +S+E+E   +A     S
Sbjct: 240 LVKPQSP--VFFHFSISQELENYTEACNAITS 269