Miyakogusa Predicted Gene
- Lj0g3v0285839.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0285839.1 Non Characterized Hit- tr|I3S6M1|I3S6M1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,62.57,0,K-box,Transcription factor, K-box; MADS BOX PROTEIN,NULL;
seg,NULL; coiled-coil,NULL; K_BOX,Transcri,CUFF.19066.1
(169 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g033220.1 | MADS-box transcription factor | HC | chr8:1277... 131 3e-31
Medtr8g033220.2 | MADS-box transcription factor | HC | chr8:1277... 131 3e-31
Medtr8g033250.1 | MADS-box transcription factor | HC | chr8:1279... 130 5e-31
Medtr7g075870.2 | MADS-box transcription factor | HC | chr7:2850... 94 6e-20
Medtr7g075870.3 | MADS-box transcription factor | HC | chr7:2850... 94 6e-20
Medtr7g075870.1 | MADS-box transcription factor | HC | chr7:2850... 94 7e-20
Medtr4g102530.2 | MADS-box transcription factor | HC | chr4:4250... 68 3e-12
Medtr4g102530.1 | MADS-box transcription factor | HC | chr4:4250... 68 3e-12
>Medtr8g033220.1 | MADS-box transcription factor | HC |
chr8:12771708-12781114 | 20130731
Length = 230
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 95/171 (55%), Gaps = 9/171 (5%)
Query: 1 MLESIERYRKHTR-NNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSC 59
+LE+IERYR HTR NN T SVE N Q LKEEA MMKKID+LE +KRKL GEGLGSC
Sbjct: 62 ILETIERYRSHTRINNTPTTSESVE-NTQQLKEEAENMMKKIDLLETSKRKLLGEGLGSC 120
Query: 60 SXXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYG-IGPEPP 118
S RSI +RA+K+Q + AEN+ L+EKYG +
Sbjct: 121 SIDELQKIEQQLERSISKIRAKKTQVFREQIEQLKEKEKTLVAENAMLAEKYGNYSSQEA 180
Query: 119 TLDQRAKPRMDLHRXXXXXXXXXXXXXXDVETELFIGLPEARIRRISPKLN 169
T DQR + DVETELFIGLPE R RRISPK++
Sbjct: 181 TKDQRE------NIVEAETYADQSSPSSDVETELFIGLPETRTRRISPKVD 225
>Medtr8g033220.2 | MADS-box transcription factor | HC |
chr8:12771471-12781173 | 20130731
Length = 224
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 94/170 (55%), Gaps = 9/170 (5%)
Query: 1 MLESIERYRKHTR-NNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSC 59
+LE+IERYR HTR NN T SVE N Q LKEEA MMKKID+LE +KRKL GEGLGSC
Sbjct: 62 ILETIERYRSHTRINNTPTTSESVE-NTQQLKEEAENMMKKIDLLETSKRKLLGEGLGSC 120
Query: 60 SXXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYG-IGPEPP 118
S RSI +RA+K+Q + AEN+ L+EKYG +
Sbjct: 121 SIDELQKIEQQLERSISKIRAKKTQVFREQIEQLKEKEKTLVAENAMLAEKYGNYSSQEA 180
Query: 119 TLDQRAKPRMDLHRXXXXXXXXXXXXXXDVETELFIGLPEARIRRISPKL 168
T DQR + DVETELFIGLPE R RRISPK+
Sbjct: 181 TKDQRE------NIVEAETYADQSSPSSDVETELFIGLPETRTRRISPKV 224
>Medtr8g033250.1 | MADS-box transcription factor | HC |
chr8:12791078-12804475 | 20130731
Length = 224
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 96/175 (54%), Gaps = 19/175 (10%)
Query: 1 MLESIERYRKHTR-NNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSC 59
+LE+IERYR HTR NN T SVE N Q LKEEA MMKKID+LE +KRKL GEGLGSC
Sbjct: 62 ILETIERYRSHTRINNTPTTSESVE-NTQQLKEEAENMMKKIDLLETSKRKLLGEGLGSC 120
Query: 60 SXXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYG-IGPEPP 118
S +SI +R +K++ + AEN RLSEKYG +
Sbjct: 121 SIDELQKIEQQLEKSINKIRVKKTKVFREQIDQLKEKEKALVAENVRLSEKYGNYSTQES 180
Query: 119 TLDQR-----AKPRMDLHRXXXXXXXXXXXXXXDVETELFIGLPEARIRRISPKL 168
T DQR A+P D DVETELFIGLPE R RRISPK+
Sbjct: 181 TKDQRENIAEAEPYAD-----------QSSPSSDVETELFIGLPETRSRRISPKV 224
>Medtr7g075870.2 | MADS-box transcription factor | HC |
chr7:28500972-28481582 | 20130731
Length = 212
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 1 MLESIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCS 60
M ++IERYR++TR+ Q S EQNMQ+LK E +MKKI++LE +KRKL GEGLGSCS
Sbjct: 62 MQDTIERYRRNTRS-AQPMQRSDEQNMQNLKHETASLMKKIELLEASKRKLMGEGLGSCS 120
Query: 61 XXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPEPPTL 120
+S+ VRARK+QAY AEN+RLS++ PT
Sbjct: 121 LDELQQIEQQLEKSVSVVRARKNQAYKHQIDQLKEKEKNLVAENARLSKQPPQPQPQPTT 180
Query: 121 DQRAKPRMDLHRXXXXXXXXXXXXXXDVETELFIGL 156
H+ DV TELFIGL
Sbjct: 181 KD--------HQREDQQPYAESSPSSDVVTELFIGL 208
>Medtr7g075870.3 | MADS-box transcription factor | HC |
chr7:28500906-28481460 | 20130731
Length = 212
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 1 MLESIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCS 60
M ++IERYR++TR+ Q S EQNMQ+LK E +MKKI++LE +KRKL GEGLGSCS
Sbjct: 62 MQDTIERYRRNTRS-AQPMQRSDEQNMQNLKHETASLMKKIELLEASKRKLMGEGLGSCS 120
Query: 61 XXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPEPPTL 120
+S+ VRARK+QAY AEN+RLS++ PT
Sbjct: 121 LDELQQIEQQLEKSVSVVRARKNQAYKHQIDQLKEKEKNLVAENARLSKQPPQPQPQPTT 180
Query: 121 DQRAKPRMDLHRXXXXXXXXXXXXXXDVETELFIGL 156
H+ DV TELFIGL
Sbjct: 181 KD--------HQREDQQPYAESSPSSDVVTELFIGL 208
>Medtr7g075870.1 | MADS-box transcription factor | HC |
chr7:28500828-28481508 | 20130731
Length = 213
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 1 MLESIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCS 60
M ++IERYR++TR+ Q S EQNMQ+LK E +MKKI++LE +KRKL GEGLGSCS
Sbjct: 63 MQDTIERYRRNTRS-AQPMQRSDEQNMQNLKHETASLMKKIELLEASKRKLMGEGLGSCS 121
Query: 61 XXXXXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPEPPTL 120
+S+ VRARK+QAY AEN+RLS++ PT
Sbjct: 122 LDELQQIEQQLEKSVSVVRARKNQAYKHQIDQLKEKEKNLVAENARLSKQPPQPQPQPTT 181
Query: 121 DQRAKPRMDLHRXXXXXXXXXXXXXXDVETELFIGL 156
H+ DV TELFIGL
Sbjct: 182 KD--------HQREDQQPYAESSPSSDVVTELFIGL 209
>Medtr4g102530.2 | MADS-box transcription factor | HC |
chr4:42507093-42499516 | 20130731
Length = 205
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 4 SIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCSXXX 63
++ERY+ + V + +++N QHLKE KK++ LE +KRKL GE LGSC+
Sbjct: 65 TVERYQGKVKELVLSTKG-IQENTQHLKECDIDTTKKLEHLELSKRKLLGEELGSCAFDE 123
Query: 64 XXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPEPPTLDQR 123
RS+ +RARK+Q EN RL ++ GIG + L+++
Sbjct: 124 LQQIENQLERSLSKIRARKNQLLKEQIEKLKDKERLLLEENKRLCKQCGIG-QNDCLNKQ 182
Query: 124 AKPRMDLHRXXXXXXXXXXXXXXDVETELFIGLPEARI 161
+ D +VETELFIG P+ R+
Sbjct: 183 QESVHD----------------EEVETELFIGRPKKRM 204
>Medtr4g102530.1 | MADS-box transcription factor | HC |
chr4:42507110-42499516 | 20130731
Length = 205
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 4 SIERYRKHTRNNVQTAHASVEQNMQHLKEEATIMMKKIDILEETKRKLSGEGLGSCSXXX 63
++ERY+ + V + +++N QHLKE KK++ LE +KRKL GE LGSC+
Sbjct: 65 TVERYQGKVKELVLSTKG-IQENTQHLKECDIDTTKKLEHLELSKRKLLGEELGSCAFDE 123
Query: 64 XXXXXXXXXRSIRSVRARKSQAYMXXXXXXXXXXXXXXAENSRLSEKYGIGPEPPTLDQR 123
RS+ +RARK+Q EN RL ++ GIG + L+++
Sbjct: 124 LQQIENQLERSLSKIRARKNQLLKEQIEKLKDKERLLLEENKRLCKQCGIG-QNDCLNKQ 182
Query: 124 AKPRMDLHRXXXXXXXXXXXXXXDVETELFIGLPEARI 161
+ D +VETELFIG P+ R+
Sbjct: 183 QESVHD----------------EEVETELFIGRPKKRM 204