Miyakogusa Predicted Gene

Lj0g3v0285549.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0285549.2 Non Characterized Hit- tr|G7KA83|G7KA83_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,86.67,2e-19,
,CUFF.19063.2
         (62 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g062750.1 | transmembrane protein, putative | HC | chr5:26...   101   1e-22

>Medtr5g062750.1 | transmembrane protein, putative | HC |
          chr5:26020840-26024270 | 20130731
          Length = 83

 Score =  101 bits (252), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/61 (86%), Positives = 57/61 (93%), Gaps = 2/61 (3%)

Query: 2  MESSLSFWEYTVFLFLRPLLAISFVLTLISLGWLLAWKLVLVHVPLVQEIFGLKKKPVRS 61
          MESS+  WEY+V LFLRPL AI+FVL+LISLGWLLAWKLVLVHVPLVQEIFGLKKKPVRS
Sbjct: 1  MESSI--WEYSVILFLRPLFAIAFVLSLISLGWLLAWKLVLVHVPLVQEIFGLKKKPVRS 58

Query: 62 K 62
          K
Sbjct: 59 K 59