Miyakogusa Predicted Gene

Lj0g3v0285129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0285129.1 tr|A9SEV9|A9SEV9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_233109,38.14,0.00000000000003,seg,NULL,CUFF.19022.1
         (649 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g069400.1 | nucleotide-diphospho-sugar transferase family ...   608   e-174

>Medtr8g069400.1 | nucleotide-diphospho-sugar transferase family
           protein | HC | chr8:29073407-29058020 | 20130731
          Length = 1877

 Score =  608 bits (1567), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 361/616 (58%), Positives = 410/616 (66%), Gaps = 44/616 (7%)

Query: 1   MHAPPFAPRSHSVDS-INLADQPLEFAPKFSRDSELQMQSTYNHHDSSGSMNNWGAPVAP 59
           MHAP FA  SHSVDS INLADQPL FAP FSRDS+LQMQSTYNHHDS+ SMNNWGAPVAP
Sbjct: 305 MHAPSFASHSHSVDSSINLADQPLNFAPTFSRDSDLQMQSTYNHHDSASSMNNWGAPVAP 364

Query: 60  GIGYPSITPILPSGPQHDPSVTNPGHV--PYGRX---XXXXXXXXXXXXXXXXXGTAIHH 114
           G+ YP I P  PSGPQHDPS+T PGHV  PYGR                        IH 
Sbjct: 365 GVVYPPIHPSHPSGPQHDPSITTPGHVAAPYGRFPGPGHPPTIPTNGAPYSLNTAATIHP 424

Query: 115 SAAFSADAYGISGVPERPKKASVPNWLRDEIKKTVIAAPSVDHPKEEATFVDDGIDKSYV 174
           +AAFSADAYG+SGVPERPKKASVPNWLR+EIKKTVI APS DHPK E T   DGIDKSYV
Sbjct: 425 TAAFSADAYGVSGVPERPKKASVPNWLREEIKKTVITAPSADHPKVEETLGVDGIDKSYV 484

Query: 175 KGD-EADSKSIDSSRSAXXXXXXXXHGEAARTAAINQEIKKVLTEVLLKVTDELFDEIAT 233
           K D E DSKSIDSSRSA                               +VTDELFDEIAT
Sbjct: 485 KADDETDSKSIDSSRSAEDEEEE-------------------------EVTDELFDEIAT 519

Query: 234 RVVSEDDQIAEVGHNIXXXXXXXXXXXXXXXXXXXXXXVLVPVKAKEIENGGANEKSNSS 293
           +V+SEDD  AEVG+N+                      VLVPVKAKE EN GANEKSNSS
Sbjct: 520 KVLSEDDLTAEVGYNVSTSNHKASISPPSAPVPKATAKVLVPVKAKETENDGANEKSNSS 579

Query: 294 FPGDVLGLGNYGSDADDEDDEIKNSSVPTPAKEAANMVNNLVKPSSLPSRNSNGAAIDQV 353
            PGDVLGLGNYGSDADDE   I++S+VP PAK+ A MVNN  K +S  SRNSNGAAIDQ 
Sbjct: 580 SPGDVLGLGNYGSDADDE---IESSTVPAPAKDDAYMVNNTAKTNSSLSRNSNGAAIDQS 636

Query: 354 HDDKVIEKFDNASKVASKDNRDNELNAIESSHARLNGFSSKDTPGMPRSELSGKNVGAEK 413
           HD K+ ++ D  S V SKD RDN L+ IE SH R NGFSSKD  G+PR+EL  +N G EK
Sbjct: 637 HDAKMTKESD--SNVVSKDARDNGLDEIERSHNRFNGFSSKDMSGVPRAELREQN-GVEK 693

Query: 414 AVDDHTGRGSRKK----NRLDRNSSEKDFIKEEQGGNTRTDEKGNDSRRRKDERHQKKDQ 469
           A DDH G+ SR+K    +R D++SSEKDF + +    TR DEKG++S+RRKDER+QKK+Q
Sbjct: 694 ATDDHLGKESRRKSEKNDRHDKSSSEKDFKEVKSSHKTRPDEKGDESKRRKDERNQKKEQ 753

Query: 470 TDYGSEAKEKLKEHNIRHGEKAXXXXXXXXXXHVDTKDDRKETEKSSRGRNTEDNSRRKD 529
           TDY SE+KE++KE N RHGEKA          HVD KDDRK  EK+ RG  TED SR+K+
Sbjct: 754 TDYISESKERVKEQNDRHGEKAKESESRKRSSHVDVKDDRKGAEKAHRGSTTEDTSRKKE 813

Query: 530 HAKDKEENKSRQKDASNPDRHKXXXXXXXXXXXXTTKDHLSNRXXXXXXXXXXXXKRKLH 589
           H KDK ENKSR+++AS+ +RHK            T+KDH  N             KRKL 
Sbjct: 814 HTKDKGENKSRRREASDHNRHKRRRSSSVSSRGRTSKDH--NHADDSSGEGSEGSKRKLR 871

Query: 590 HRKRDLSPSPVRSKRR 605
            +KRDLSPSPVRSKRR
Sbjct: 872 SKKRDLSPSPVRSKRR 887