Miyakogusa Predicted Gene

Lj0g3v0284819.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0284819.1 Non Characterized Hit- tr|I1K0B7|I1K0B7_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,86.94,0,Cytidine
deaminase-like,Cytidine deaminase-like; CYT_DCMP_DEAMINASES,APOBEC/CMP
deaminase, zinc-bind,CUFF.18991.1
         (222 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g103300.1 | cytidine/deoxycytidylate deaminase family prot...   358   3e-99
Medtr4g057655.1 | cytidine/deoxycytidylate deaminase family prot...   282   2e-76
Medtr4g071665.1 | cytidine/deoxycytidylate deaminase family prot...   266   1e-71

>Medtr4g103300.1 | cytidine/deoxycytidylate deaminase family protein
           | HC | chr4:42684135-42689049 | 20130731
          Length = 232

 Score =  358 bits (918), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 176/233 (75%), Positives = 189/233 (81%), Gaps = 12/233 (5%)

Query: 1   MNSREXXXXXXXXXXXXXXXXXXXRFFFNRSRRQPSRTNFSQNGTVSTPP---------- 50
           MNSRE                    FF+ RS+   S+TN SQNG VS+            
Sbjct: 1   MNSREVTLVATATAFGALASAIALHFFY-RSQTHSSKTNPSQNGIVSSSSSSSSSRVRSS 59

Query: 51  -DPFDPSRRHGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGC 109
            DPFDP++R GYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQD IILGIGYNGFPRGC
Sbjct: 60  GDPFDPTKRKGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDDIILGIGYNGFPRGC 119

Query: 110 SDDKLPWAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIII 169
           SDDKLPWAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIII
Sbjct: 120 SDDKLPWAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIII 179

Query: 170 QSGVSEVIYFVEKRLDNPDIAYIASHKLLSLAGVKVRKHQPLMNEIHLKFDEH 222
           QSGVSEVIYFVEK+L+N D+ Y ASHKLLSLAGVKVRKHQPLM+EIHLK+++H
Sbjct: 180 QSGVSEVIYFVEKKLENSDVTYTASHKLLSLAGVKVRKHQPLMSEIHLKYEDH 232


>Medtr4g057655.1 | cytidine/deoxycytidylate deaminase family protein
           | HC | chr4:21185422-21186106 | 20130731
          Length = 200

 Score =  282 bits (722), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 143/227 (62%), Positives = 158/227 (69%), Gaps = 32/227 (14%)

Query: 1   MNSREXXXXXXXXXXXXXXXXXXXRFFFNRSRRQPSRTNFSQNGTVSTP-----PDPFDP 55
           MNSRE                    FF+ RS+   S+T  SQNGT+S+       DPFDP
Sbjct: 1   MNSREVTLVATATAYGALASAIALHFFY-RSQTHSSKTKTSQNGTISSSRVRSSGDPFDP 59

Query: 56  SRRHGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLP 115
           ++R GYLSWDDYFMAI FLSAERSKDPNRQVGACLVSQD IILGIGYN FPRGCSDDKLP
Sbjct: 60  TKRKGYLSWDDYFMAITFLSAERSKDPNRQVGACLVSQDDIILGIGYNEFPRGCSDDKLP 119

Query: 116 WAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSE 175
           WAKKSRTGN LETKYPYVCHA                          ECAKIIIQSG SE
Sbjct: 120 WAKKSRTGNHLETKYPYVCHA--------------------------ECAKIIIQSGDSE 153

Query: 176 VIYFVEKRLDNPDIAYIASHKLLSLAGVKVRKHQPLMNEIHLKFDEH 222
           VIYFVEK+L+N D+ Y ASHKLLSLAGVKVRK QP+M+EIHLK+++H
Sbjct: 154 VIYFVEKKLENSDVTYTASHKLLSLAGVKVRKLQPVMSEIHLKYEDH 200


>Medtr4g071665.1 | cytidine/deoxycytidylate deaminase family protein
           | HC | chr4:27119020-27119700 | 20130731
          Length = 192

 Score =  266 bits (679), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 138/227 (60%), Positives = 152/227 (66%), Gaps = 40/227 (17%)

Query: 1   MNSREXXXXXXXXXXXXXXXXXXXRFFFNRSRRQPSRTNFSQNGTVSTP-----PDPFDP 55
           MNSRE                    FF+ RS+   S+TN SQNGT+S+       DPFDP
Sbjct: 1   MNSREVTLVATATASGALASAIALHFFY-RSQTHSSKTNPSQNGTISSSRVRSSGDPFDP 59

Query: 56  SRRHGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLP 115
           ++R GYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQD IILGIGYN FPRGCSDDKLP
Sbjct: 60  TKRKGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDDIILGIGYNEFPRGCSDDKLP 119

Query: 116 WAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSE 175
           WAKKSRTGNPLETKYPYVCHAEVNAILNTNHAS                           
Sbjct: 120 WAKKSRTGNPLETKYPYVCHAEVNAILNTNHASV-------------------------- 153

Query: 176 VIYFVEKRLDNPDIAYIASHKLLSLAGVKVRKHQPLMNEIHLKFDEH 222
                   LD+  + Y ASHKLLSLAGVKVRK QP+M+EIHLK+++H
Sbjct: 154 --------LDSGYVTYTASHKLLSLAGVKVRKLQPVMSEIHLKYEDH 192