Miyakogusa Predicted Gene

Lj0g3v0284239.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0284239.1 Non Characterized Hit- tr|Q4VSY9|Q4VSY9_PINLO
Putative LEA protein (Fragment) OS=Pinus longaeva
GN=i,52.27,9e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Water Stress and Hypersensitive response,Water stre,CUFF.18941.1
         (152 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028480.1 | late embryogenesis abundant protein | HC | chr...   262   1e-70
Medtr7g079180.2 | late embryogenesis abundant protein | HC | chr...   234   2e-62
Medtr7g079180.1 | late embryogenesis abundant protein | HC | chr...   228   2e-60
Medtr5g088850.2 | late embryogenesis abundant protein | HC | chr...    87   6e-18
Medtr5g088850.1 | late embryogenesis abundant protein | HC | chr...    87   6e-18
Medtr3g045190.3 | late embryogenesis abundant protein | HC | chr...    87   7e-18
Medtr3g045190.1 | late embryogenesis abundant protein | HC | chr...    87   7e-18
Medtr3g045190.2 | late embryogenesis abundant protein | HC | chr...    87   7e-18
Medtr5g088850.3 | late embryogenesis abundant protein | HC | chr...    87   7e-18

>Medtr8g028480.1 | late embryogenesis abundant protein | HC |
           chr8:10819921-10819001 | 20130731
          Length = 153

 Score =  262 bits (669), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 125/152 (82%), Positives = 142/152 (93%)

Query: 1   MSQLLNKAKNFVSEKVNDVAKPEASVTNVDFQRVTKDSVEYLANVSVHNPYSTPIPICEI 60
           MSQL+NKAKNFVSEK+ D+AKPEASVT+VDF++V+ ++VEYLA VSV+NPYSTPIPICE+
Sbjct: 1   MSQLVNKAKNFVSEKIGDMAKPEASVTDVDFKKVSMNNVEYLAKVSVNNPYSTPIPICEV 60

Query: 61  NYSFKSATREIASGRIPDPGSLKAKDMTMVNVPVKVPYSILMSLAKDIGADWDIDYQLDI 120
            YSFKSA REIASG IPDPGSLKAKD TMV+VPVKVPYSILMSLAKDIGADWDIDYQLD+
Sbjct: 61  KYSFKSANREIASGTIPDPGSLKAKDTTMVDVPVKVPYSILMSLAKDIGADWDIDYQLDL 120

Query: 121 GLVIDLPAIGNFTIPLSHKGEVKLPNPASMFA 152
           GLVIDLP IGNFTIPLS KGEVKLP+ ++MF+
Sbjct: 121 GLVIDLPVIGNFTIPLSQKGEVKLPSASNMFS 152


>Medtr7g079180.2 | late embryogenesis abundant protein | HC |
           chr7:30029478-30032290 | 20130731
          Length = 152

 Score =  234 bits (597), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 112/152 (73%), Positives = 132/152 (86%)

Query: 1   MSQLLNKAKNFVSEKVNDVAKPEASVTNVDFQRVTKDSVEYLANVSVHNPYSTPIPICEI 60
           MSQLL+KAKNF++EKV D+ KPEA++T+VDF+ VT+ SVEYLA V+V NPYST IPICEI
Sbjct: 1   MSQLLDKAKNFIAEKVADMPKPEANITDVDFKDVTRQSVEYLAKVNVSNPYSTSIPICEI 60

Query: 61  NYSFKSATREIASGRIPDPGSLKAKDMTMVNVPVKVPYSILMSLAKDIGADWDIDYQLDI 120
            YSFKSA REIASG +PDPGSLKA D T++NV VKVP++I++SL KDIGADWDIDYQLDI
Sbjct: 61  KYSFKSANREIASGTVPDPGSLKASDTTLLNVLVKVPHNIIVSLVKDIGADWDIDYQLDI 120

Query: 121 GLVIDLPAIGNFTIPLSHKGEVKLPNPASMFA 152
           GLVIDLP IGNFTIPL  KGE+KLP+ +  FA
Sbjct: 121 GLVIDLPIIGNFTIPLCQKGEIKLPSISDFFA 152


>Medtr7g079180.1 | late embryogenesis abundant protein | HC |
           chr7:30028911-30032416 | 20130731
          Length = 151

 Score =  228 bits (581), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 109/149 (73%), Positives = 129/149 (86%)

Query: 4   LLNKAKNFVSEKVNDVAKPEASVTNVDFQRVTKDSVEYLANVSVHNPYSTPIPICEINYS 63
           LL+KAKNF++EKV D+ KPEA++T+VDF+ VT+ SVEYLA V+V NPYST IPICEI YS
Sbjct: 3   LLDKAKNFIAEKVADMPKPEANITDVDFKDVTRQSVEYLAKVNVSNPYSTSIPICEIKYS 62

Query: 64  FKSATREIASGRIPDPGSLKAKDMTMVNVPVKVPYSILMSLAKDIGADWDIDYQLDIGLV 123
           FKSA REIASG +PDPGSLKA D T++NV VKVP++I++SL KDIGADWDIDYQLDIGLV
Sbjct: 63  FKSANREIASGTVPDPGSLKASDTTLLNVLVKVPHNIIVSLVKDIGADWDIDYQLDIGLV 122

Query: 124 IDLPAIGNFTIPLSHKGEVKLPNPASMFA 152
           IDLP IGNFTIPL  KGE+KLP+ +  FA
Sbjct: 123 IDLPIIGNFTIPLCQKGEIKLPSISDFFA 151


>Medtr5g088850.2 | late embryogenesis abundant protein | HC |
           chr5:38586081-38584091 | 20130731
          Length = 334

 Score = 87.0 bits (214), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)

Query: 4   LLNKAKNFV---SEKVNDV---AKPEASVTNVDFQRVTKDSVEYLANVSVHNPYSTPIPI 57
            + K K+F+    EK+ +V    KP A V  +   ++    ++ + ++ + NP   PIP+
Sbjct: 35  FIEKVKDFIHDIGEKIEEVIGFGKPTADVKAIHVPKINLHKIDLVVDILIKNPNPVPIPL 94

Query: 58  CEINYSFKSATREIASGRIPDPGSLKAKDMTMVNVPVKVPYSILMSLAKDIGADWDIDYQ 117
            +INY   S  R++ SG IPD G++ A     V +P+ + Y  +     DI     I Y+
Sbjct: 95  IDINYLIDSDDRKLISGLIPDAGTIHAHGEETVKIPLTLIYDDIKETYADIKPGTIIPYR 154

Query: 118 LDIGLVIDLPAIGNFTIPLSHKGEVKLP 145
           + + L+ D+P +G FT+PL  KGE+ +P
Sbjct: 155 VKVDLIFDVPVLGRFTLPLEKKGEIPIP 182


>Medtr5g088850.1 | late embryogenesis abundant protein | HC |
           chr5:38586576-38584075 | 20130731
          Length = 324

 Score = 87.0 bits (214), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)

Query: 4   LLNKAKNFV---SEKVNDV---AKPEASVTNVDFQRVTKDSVEYLANVSVHNPYSTPIPI 57
            + K K+F+    EK+ +V    KP A V  +   ++    ++ + ++ + NP   PIP+
Sbjct: 35  FIEKVKDFIHDIGEKIEEVIGFGKPTADVKAIHVPKINLHKIDLVVDILIKNPNPVPIPL 94

Query: 58  CEINYSFKSATREIASGRIPDPGSLKAKDMTMVNVPVKVPYSILMSLAKDIGADWDIDYQ 117
            +INY   S  R++ SG IPD G++ A     V +P+ + Y  +     DI     I Y+
Sbjct: 95  IDINYLIDSDDRKLISGLIPDAGTIHAHGEETVKIPLTLIYDDIKETYADIKPGTIIPYR 154

Query: 118 LDIGLVIDLPAIGNFTIPLSHKGEVKLP 145
           + + L+ D+P +G FT+PL  KGE+ +P
Sbjct: 155 VKVDLIFDVPVLGRFTLPLEKKGEIPIP 182


>Medtr3g045190.3 | late embryogenesis abundant protein | HC |
           chr3:14618137-14621226 | 20130731
          Length = 310

 Score = 86.7 bits (213), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)

Query: 4   LLNKAKNFV---SEKVNDV---AKPEASVTNVDFQRVTKDSVEYLANVSVHNPYSTPIPI 57
            LN  K F+    EK+ +     KP A V+ +   ++  +  + + ++ + NP   PIP+
Sbjct: 25  FLNTVKGFIQDIGEKIEETVGFGKPTADVSAIHIPKINLEKADLVVDILIKNPNPVPIPL 84

Query: 58  CEINYSFKSATREIASGRIPDPGSLKAKDMTMVNVPVKVPYSILMSLAKDIGADWDIDYQ 117
            +INY  +S  R++ SG IPD G++ A     V +PV + Y  + +   DI     I Y+
Sbjct: 85  IDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNTYADIQPGSIIPYK 144

Query: 118 LDIGLVIDLPAIGNFTIPLSHKGEVKLP 145
           + + L++D+P IG  TIPL   GE+ +P
Sbjct: 145 VKVDLIVDVPVIGRITIPLEKTGEIPIP 172


>Medtr3g045190.1 | late embryogenesis abundant protein | HC |
           chr3:14618265-14621218 | 20130731
          Length = 310

 Score = 86.7 bits (213), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)

Query: 4   LLNKAKNFV---SEKVNDV---AKPEASVTNVDFQRVTKDSVEYLANVSVHNPYSTPIPI 57
            LN  K F+    EK+ +     KP A V+ +   ++  +  + + ++ + NP   PIP+
Sbjct: 25  FLNTVKGFIQDIGEKIEETVGFGKPTADVSAIHIPKINLEKADLVVDILIKNPNPVPIPL 84

Query: 58  CEINYSFKSATREIASGRIPDPGSLKAKDMTMVNVPVKVPYSILMSLAKDIGADWDIDYQ 117
            +INY  +S  R++ SG IPD G++ A     V +PV + Y  + +   DI     I Y+
Sbjct: 85  IDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNTYADIQPGSIIPYK 144

Query: 118 LDIGLVIDLPAIGNFTIPLSHKGEVKLP 145
           + + L++D+P IG  TIPL   GE+ +P
Sbjct: 145 VKVDLIVDVPVIGRITIPLEKTGEIPIP 172


>Medtr3g045190.2 | late embryogenesis abundant protein | HC |
           chr3:14618123-14621294 | 20130731
          Length = 310

 Score = 86.7 bits (213), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)

Query: 4   LLNKAKNFV---SEKVNDV---AKPEASVTNVDFQRVTKDSVEYLANVSVHNPYSTPIPI 57
            LN  K F+    EK+ +     KP A V+ +   ++  +  + + ++ + NP   PIP+
Sbjct: 25  FLNTVKGFIQDIGEKIEETVGFGKPTADVSAIHIPKINLEKADLVVDILIKNPNPVPIPL 84

Query: 58  CEINYSFKSATREIASGRIPDPGSLKAKDMTMVNVPVKVPYSILMSLAKDIGADWDIDYQ 117
            +INY  +S  R++ SG IPD G++ A     V +PV + Y  + +   DI     I Y+
Sbjct: 85  IDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNTYADIQPGSIIPYK 144

Query: 118 LDIGLVIDLPAIGNFTIPLSHKGEVKLP 145
           + + L++D+P IG  TIPL   GE+ +P
Sbjct: 145 VKVDLIVDVPVIGRITIPLEKTGEIPIP 172


>Medtr5g088850.3 | late embryogenesis abundant protein | HC |
           chr5:38586212-38584091 | 20130731
          Length = 367

 Score = 86.7 bits (213), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)

Query: 4   LLNKAKNFV---SEKVNDV---AKPEASVTNVDFQRVTKDSVEYLANVSVHNPYSTPIPI 57
            + K K+F+    EK+ +V    KP A V  +   ++    ++ + ++ + NP   PIP+
Sbjct: 35  FIEKVKDFIHDIGEKIEEVIGFGKPTADVKAIHVPKINLHKIDLVVDILIKNPNPVPIPL 94

Query: 58  CEINYSFKSATREIASGRIPDPGSLKAKDMTMVNVPVKVPYSILMSLAKDIGADWDIDYQ 117
            +INY   S  R++ SG IPD G++ A     V +P+ + Y  +     DI     I Y+
Sbjct: 95  IDINYLIDSDDRKLISGLIPDAGTIHAHGEETVKIPLTLIYDDIKETYADIKPGTIIPYR 154

Query: 118 LDIGLVIDLPAIGNFTIPLSHKGEVKLP 145
           + + L+ D+P +G FT+PL  KGE+ +P
Sbjct: 155 VKVDLIFDVPVLGRFTLPLEKKGEIPIP 182