Miyakogusa Predicted Gene

Lj0g3v0283999.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0283999.1 Non Characterized Hit- tr|K3YQF5|K3YQF5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016498,28.05,3e-18,seg,NULL,CUFF.18928.1
         (619 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g060420.1 | hypothetical protein | HC | chr5:25018270-2502...   770   0.0  
Medtr3g073280.1 | hypothetical protein | HC | chr3:33032551-3303...   625   e-179
Medtr2g461250.1 | hypothetical protein | HC | chr2:25288039-2528...    83   1e-15

>Medtr5g060420.1 | hypothetical protein | HC |
           chr5:25018270-25024844 | 20130731
          Length = 627

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/629 (67%), Positives = 455/629 (72%), Gaps = 12/629 (1%)

Query: 1   MDRSEPSLVPQWLRXXXXXXXXXXXXQHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MDRSEPSLVP+WLR            QHF                               
Sbjct: 1   MDRSEPSLVPEWLRSAGSVVGAGNSAQHFASSSSHADSHSPSAANNNRNRSSKNTGDFDS 60

Query: 61  XXXX--XXXXXXXXXXXXXXXXAKHAYSSFNRSHXXXXXXXXXXXTNFIDHWDRDGSDPL 118
                                 AKHAYSSFNR+H           +NF DHWDRDGSDPL
Sbjct: 61  SRSVFLDRTSSASSRRGSINGSAKHAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPL 120

Query: 119 ANLFSGRMERDTLRRSHSMVSRKQGEVLPRRVAADTKXXXXXXXXXXXAIRSGGSVGSSI 178
            NLFSGR+ERDTLRRSHSMVSRKQGE LPRRVAADTK              S GSVGSSI
Sbjct: 121 VNLFSGRIERDTLRRSHSMVSRKQGETLPRRVAADTKSGGSSNHNNGNGALSVGSVGSSI 180

Query: 179 QKAVFDKDFPSLGAEEKQGIAEIRRVSSPVLGTTASQSLPVSSSALIGGEGWTSALAEVP 238
           QKAVFDKDFPSLGA+EKQGIAEI RVSSP LG TASQSLPV SSALIGGEGWTSALAEVP
Sbjct: 181 QKAVFDKDFPSLGADEKQGIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEVP 240

Query: 239 SIIGSSSAGTLSAQQXXXXXXXXXXXXXXXXXNMAEALAQTPSRARTAPQVSVQTQRLEE 298
           S+IGSSSAG+ SAQQ                 NMAEALAQ PSRAR+ PQVSV+TQRLEE
Sbjct: 241 SVIGSSSAGSSSAQQTIAATSVSVSSSTAAGLNMAEALAQAPSRARSTPQVSVKTQRLEE 300

Query: 299 LAIKQSRQLIPVTPSMPKASVLNSSEKLKPKTAVRNADMNVVSKSVPQQPSGLHIAGQSV 358
           LAIKQSRQLIPVTPSMPKA  LNSSEK KPKTAVRNA+MNV +KS  QQPS LHIA QSV
Sbjct: 301 LAIKQSRQLIPVTPSMPKALALNSSEKSKPKTAVRNAEMNVATKSALQQPSALHIASQSV 360

Query: 359 RSVNAKVDTPKTSGKFTDLKTVVWENGASPISKDVSSPT---NSKSGNQHAVTSAAASTP 415
           R VNAKVD PKTSGKFTDLK+VVWENGASP SKDVS+PT   NSKS NQH V SAAA TP
Sbjct: 361 RIVNAKVDVPKTSGKFTDLKSVVWENGASPTSKDVSNPTNYANSKSANQHCVASAAAPTP 420

Query: 416 VRNPNNLKSSTERKPASSDLKLGSPLDKKHSSSQVQSRNDFFNLIKKKTLMNSSAVLPES 475
           VRNP+NL S  ERKPAS DLKLGS LDKK S SQV+SRNDFFNL+K KT  NSS V P+S
Sbjct: 421 VRNPSNLNSPRERKPASLDLKLGSALDKKQSISQVKSRNDFFNLLKNKTATNSSTVFPDS 480

Query: 476 GPTVSSPSLEKSGEVNMEIVSPSASLESLGNGAELTSNGN----AHEALCRTSDNEGKDS 531
           G  VSSP+LEKSGEVN E V PSAS +S+GN AE TSNGN    AHE L R SD++ K+S
Sbjct: 481 GQMVSSPTLEKSGEVNRESVMPSASPQSVGNAAEPTSNGNAHAHAHEVLSRISDDDEKNS 540

Query: 532 VLSATIYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKNLDPSTFKLS-QGMQP 590
              AT+YPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECK LDPS  KL  +GMQP
Sbjct: 541 --RATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSALKLCIEGMQP 598

Query: 591 KLSKLFESYASNLRGASAELSSSGPRSDA 619
           +LSKLF+S ASNLRGASAEL+SS PRS+A
Sbjct: 599 QLSKLFDSCASNLRGASAELNSSEPRSEA 627


>Medtr3g073280.1 | hypothetical protein | HC |
           chr3:33032551-33038006 | 20130731
          Length = 618

 Score =  625 bits (1611), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 347/544 (63%), Positives = 402/544 (73%), Gaps = 20/544 (3%)

Query: 81  AKHAYSSFNRSHXXXXXXXXXXX----TNFIDHWDRDGSDPLANLFSGRMERDTLRRSHS 136
           AKHAYSSFNR+H               ++F+DHWDR+ S+PLA+LF+GR ERDTLRRSHS
Sbjct: 78  AKHAYSSFNRNHRDKDRDRDRDRDKDRSHFLDHWDRNCSEPLADLFAGRTERDTLRRSHS 137

Query: 137 MVSRKQGEVLPRRVAADTKXXXXXXXXXXXAIRSGGSVGSSIQKAVFDKDFPSLGAEEKQ 196
           +VSRKQ E +  R   DTK            + SGGS+GSS  KAVFDKDFPSLG +E+ 
Sbjct: 138 LVSRKQSEPVNHRGTVDTKSGSNCNQSNGNDVLSGGSIGSSFHKAVFDKDFPSLGGDERP 197

Query: 197 GIAEIRRVSSPVLGT--TASQSLPVSSSALIGGEGWTSALAEVPSIIGSSSAGTLSAQQX 254
           G AEI RV+SPVLG   TASQSLPV SS+LIGGEGWTSALAEVPS+IGSSS G+ +AQQ 
Sbjct: 198 GSAEIGRVASPVLGLGGTASQSLPVGSSSLIGGEGWTSALAEVPSMIGSSSTGSPTAQQT 257

Query: 255 XXXXXXXXXXXXXXXXNMAEALAQTPSRARTAPQVSVQTQRLEELAIKQSRQLIPVTPSM 314
                           NMAEAL Q PSR+++ PQ SV+TQRLEELAIKQSRQLIPVTPSM
Sbjct: 258 VTPTSGSVLSSTSVGLNMAEALVQAPSRSQSIPQASVKTQRLEELAIKQSRQLIPVTPSM 317

Query: 315 PKASVLNSSEKLKPKTAVRNADMNVVSKSVPQQPSGLHIAGQSVRSVNAK-VDTPKTSGK 373
           PKA ++N+SEK KPK  +RN++MN+V+KSVPQQPS LHI   SVR+ NAK VD PKTSGK
Sbjct: 318 PKA-LVNNSEKSKPKATLRNSEMNMVAKSVPQQPSALHIVNHSVRNGNAKVVDAPKTSGK 376

Query: 374 FTDLKTVVWENGASPISKDVSSPT---NSKSGNQHAVTSAAASTPVRNPNNLKSSTERKP 430
           FTDLK+VVWENG SP +KD S+PT   NSK GN  AV SA AS P+RN NN+KS+TERKP
Sbjct: 377 FTDLKSVVWENGVSPTAKDASTPTNYSNSKPGNHLAVPSAVASAPLRNTNNIKSTTERKP 436

Query: 431 ASSDLKLGSPLDKKHSSSQVQSRNDFFNLIKKKTLMNSSAVLPESGPTVSSPSLEKSGEV 490
           AS DLKLGS  DKK  +SQV+SR+DFFNLIK+KTL  +S+VLP+S   VSS + +KSGEV
Sbjct: 437 ASLDLKLGSTADKKQFASQVKSRHDFFNLIKRKTL--NSSVLPDSSSVVSSATSDKSGEV 494

Query: 491 NMEIVSPSASLESLGNGAELTSNGNAHEALCRTSDNEGKDSVLSATIYPDEEEAAFLRSL 550
           NME V P ASL+ LGN  E+TSNGNAH    R  +   KDS       PDEEE AFLRSL
Sbjct: 495 NMEAVGPPASLQDLGNSTEMTSNGNAHLENHRLPNIRLKDST------PDEEEVAFLRSL 548

Query: 551 GWEENS-DEDEGLTEEEINAFYQECKNLDPSTFKLSQGMQPKLSKLFESYASNLRGASAE 609
           GWEE+S DEDEGLTEEEIN FYQEC  +  +T KL  GMQPKLSK FESYA+NL GASA 
Sbjct: 549 GWEEDSGDEDEGLTEEEINTFYQECLKMGTTTLKLCPGMQPKLSKFFESYATNLNGASAG 608

Query: 610 LSSS 613
            S+S
Sbjct: 609 SSTS 612


>Medtr2g461250.1 | hypothetical protein | HC |
           chr2:25288039-25283348 | 20130731
          Length = 121

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 51/70 (72%), Gaps = 8/70 (11%)

Query: 271 NMAEALAQTPSRARTAPQVSVQTQRLEELAIKQSRQLIPVTPSMPKASVLNSSEKLKPKT 330
           NMAEAL   PSR+++ PQVSV+TQRLEELAIKQSRQLIPVTPS+PKA        L+P+T
Sbjct: 57  NMAEALVHAPSRSQSIPQVSVKTQRLEELAIKQSRQLIPVTPSIPKA--------LEPRT 108

Query: 331 AVRNADMNVV 340
                D  +V
Sbjct: 109 VHLKEDYVLV 118