Miyakogusa Predicted Gene

Lj0g3v0283279.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0283279.2 tr|B9IQU7|B9IQU7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_574407 PE=4
SV=1,46.61,1e-18,coiled-coil,NULL; seg,NULL,CUFF.18871.2
         (467 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g087360.2 | hypothetical protein | HC | chr4:34280746-3428...   386   e-107
Medtr4g087360.1 | hypothetical protein | HC | chr4:34281340-3428...   385   e-107
Medtr4g087350.1 | hypothetical protein | LC | chr4:34274810-3427...   175   7e-44
Medtr8g006760.1 | hypothetical protein | HC | chr8:929299-934880...   120   3e-27
Medtr7g007590.1 | hypothetical protein | HC | chr7:1568478-15720...    76   7e-14
Medtr8g047200.1 | hypothetical protein | LC | chr8:18737068-1873...    55   2e-07

>Medtr4g087360.2 | hypothetical protein | HC |
           chr4:34280746-34284802 | 20130731
          Length = 456

 Score =  386 bits (992), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/471 (47%), Positives = 282/471 (59%), Gaps = 30/471 (6%)

Query: 7   PTVKVEPFVDEPINPT--KAFEDTEVDILNWTNKGDIASNKNEDPDATEYSSSFADTTSE 64
           P VKVE  +DE I  T  K FED EVDI++WTNKGD+ S KNEDPDATEYSSSFADT S+
Sbjct: 4   PVVKVESVLDEQIGTTSSKVFEDAEVDIVSWTNKGDVGSTKNEDPDATEYSSSFADTDSD 63

Query: 65  AENDARXXXXXXXXX----XXXXXXXXXFGAIFPISSKKMKLSDHWKNFIQPIRWRCKWV 120
           AEN +R                      FG  F   ++K KL+DHW+NFI+P+ WR KW 
Sbjct: 64  AENSSRSSDAEVDSEFFGENGAASPHDTFGPEF--RTRKRKLTDHWRNFIRPLMWRLKWT 121

Query: 121 ELKLKQFESQALKYSEELAEYDKRKH-GKPDHFTLEEKGSKSFPFLNDVYXXXXXXXXXX 179
           E++LKQ ESQ LKY+ EL EYDK KH    DHFTL+E GSKS PF +  Y          
Sbjct: 122 EIRLKQIESQELKYTRELEEYDKVKHTAAHDHFTLKESGSKSLPFSSHQYRSKAKMRRRR 181

Query: 180 XXVEETPDLASYTSHHVLFSYLENKKSDADGALADDFDNPVIKEACEDSTDRVGDDDEQS 239
             VE+T D+ASY +HH LFSYLENKKSDADG+L DDFDNPVI E   DST++  D   Q 
Sbjct: 182 KKVEDTTDIASYAAHHYLFSYLENKKSDADGSLDDDFDNPVITEPHVDSTEKTED---QP 238

Query: 240 FFEFSEADASLEQILWSIDLMQSRVHKMKNDVDAIMTTNASKISPYENYCF-RYDDEGSS 298
             + ++ D S E +L +I+ +Q RV  +K+ ++ I + N S+ S  EN+    + D  +S
Sbjct: 239 LLKCTDTDMSFELLLQNIENLQCRVRTLKSGINEITSRNVSRFSSSENFSLILHGDVQTS 298

Query: 299 SARSPMNSGEIGDTAS--VGGVYNSTQHAP-EFDFGDFMMAESTVSGYGKVATVPDIIES 355
           SA+SP NS   G TAS  VGG+YNS+QHA  EF+F DF+  +S VS +G+  ++PDIIES
Sbjct: 299 SAQSPTNSAGNGYTASVGVGGIYNSSQHAADEFEFADFVFPDSCVSSFGEATSIPDIIES 358

Query: 356 TVGLLSSADVTLHQDFVGDSCEDMVDNVLMHEVAETVEHTFKDASHVVKVEDMVKIXXXX 415
           TVGLL++ADVTL    V DS E MV+NVLMHE+ E V+   ++ SH V +   +      
Sbjct: 359 TVGLLAAADVTLQSALVADSGEHMVENVLMHELQE-VKREVEEGSHSVSI---LMSDNVA 414

Query: 416 XXXXXXXXXXTLKPCVNRDVNLPXXXXXXXXXXXXXXXXXWSMKGSGESDN 466
                      LK CVN+                      W+MK  GE DN
Sbjct: 415 TTACTSQEQSALKTCVNK----------RKRGERKAGSGGWNMKSHGEPDN 455


>Medtr4g087360.1 | hypothetical protein | HC |
           chr4:34281340-34284604 | 20130731
          Length = 484

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/471 (47%), Positives = 282/471 (59%), Gaps = 30/471 (6%)

Query: 7   PTVKVEPFVDEPINPT--KAFEDTEVDILNWTNKGDIASNKNEDPDATEYSSSFADTTSE 64
           P VKVE  +DE I  T  K FED EVDI++WTNKGD+ S KNEDPDATEYSSSFADT S+
Sbjct: 32  PVVKVESVLDEQIGTTSSKVFEDAEVDIVSWTNKGDVGSTKNEDPDATEYSSSFADTDSD 91

Query: 65  AENDARXXXXXXXXX----XXXXXXXXXFGAIFPISSKKMKLSDHWKNFIQPIRWRCKWV 120
           AEN +R                      FG  F   ++K KL+DHW+NFI+P+ WR KW 
Sbjct: 92  AENSSRSSDAEVDSEFFGENGAASPHDTFGPEF--RTRKRKLTDHWRNFIRPLMWRLKWT 149

Query: 121 ELKLKQFESQALKYSEELAEYDKRKH-GKPDHFTLEEKGSKSFPFLNDVYXXXXXXXXXX 179
           E++LKQ ESQ LKY+ EL EYDK KH    DHFTL+E GSKS PF +  Y          
Sbjct: 150 EIRLKQIESQELKYTRELEEYDKVKHTAAHDHFTLKESGSKSLPFSSHQYRSKAKMRRRR 209

Query: 180 XXVEETPDLASYTSHHVLFSYLENKKSDADGALADDFDNPVIKEACEDSTDRVGDDDEQS 239
             VE+T D+ASY +HH LFSYLENKKSDADG+L DDFDNPVI E   DST++  D   Q 
Sbjct: 210 KKVEDTTDIASYAAHHYLFSYLENKKSDADGSLDDDFDNPVITEPHVDSTEKTED---QP 266

Query: 240 FFEFSEADASLEQILWSIDLMQSRVHKMKNDVDAIMTTNASKISPYENYCF-RYDDEGSS 298
             + ++ D S E +L +I+ +Q RV  +K+ ++ I + N S+ S  EN+    + D  +S
Sbjct: 267 LLKCTDTDMSFELLLQNIENLQCRVRTLKSGINEITSRNVSRFSSSENFSLILHGDVQTS 326

Query: 299 SARSPMNSGEIGDTAS--VGGVYNSTQHAP-EFDFGDFMMAESTVSGYGKVATVPDIIES 355
           SA+SP NS   G TAS  VGG+YNS+QHA  EF+F DF+  +S VS +G+  ++PDIIES
Sbjct: 327 SAQSPTNSAGNGYTASVGVGGIYNSSQHAADEFEFADFVFPDSCVSSFGEATSIPDIIES 386

Query: 356 TVGLLSSADVTLHQDFVGDSCEDMVDNVLMHEVAETVEHTFKDASHVVKVEDMVKIXXXX 415
           TVGLL++ADVTL    V DS E MV+NVLMHE+ E V+   ++ SH V +   +      
Sbjct: 387 TVGLLAAADVTLQSALVADSGEHMVENVLMHELQE-VKREVEEGSHSVSI---LMSDNVA 442

Query: 416 XXXXXXXXXXTLKPCVNRDVNLPXXXXXXXXXXXXXXXXXWSMKGSGESDN 466
                      LK CVN+                      W+MK  GE DN
Sbjct: 443 TTACTSQEQSALKTCVNK----------RKRGERKAGSGGWNMKSHGEPDN 483


>Medtr4g087350.1 | hypothetical protein | LC |
           chr4:34274810-34276215 | 20130731
          Length = 286

 Score =  175 bits (444), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 104/246 (42%), Positives = 142/246 (57%), Gaps = 9/246 (3%)

Query: 42  ASNKNEDPDATEYSSSFADTTSEAENDARXXXXXXXXX----XXXXXXXXXFGAIFPISS 97
           ASN+ EDPDATEYSSSFADT S+AEN +                       FG   P   
Sbjct: 27  ASNEIEDPDATEYSSSFADTISDAENGSEGNGDEVQSELFGENGMACPQDPFGPDVPTRK 86

Query: 98  KKMKLSDHWKNFIQPIRWRCKWVELKLKQFESQALKYSEELAEYDKRKHGKPDHFTLEEK 157
           +K+  +D W+NFI+P+ WR KW E++LKQ ESQ  K  +EL + D+ KH   DHF LEE 
Sbjct: 87  RKLVTND-WQNFIRPLSWRMKWTEIRLKQLESQEFKCRKELEKCDREKHKATDHFNLEEF 145

Query: 158 GSKSFPFLNDVYXXXXXXXXXXXXVEETPDLASYTSHHVLFSYLENKKSDADGALADDFD 217
           GS+S PF +  Y            +E+T D+A+YT HH LFSYLENKKSDADG+  ++ D
Sbjct: 146 GSRSVPFSSHQYRSKAKVRRRRKKIEDTTDVATYTKHHPLFSYLENKKSDADGSSDEESD 205

Query: 218 NPVIKEACEDSTDRVGDDDEQSFFEFSEADASLEQILWSIDLMQSRVHKMKNDVDAIMTT 277
           N   +E  EDST+  G  +     E ++ D   E +  +ID +Q R+  M++ +D+I +T
Sbjct: 206 NS--EELNEDSTENFG--EAVPVLECTDTDIFFEDLFSNIDDLQDRIDVMRDLIDSIRST 261

Query: 278 NASKIS 283
           + S  S
Sbjct: 262 DDSASS 267


>Medtr8g006760.1 | hypothetical protein | HC | chr8:929299-934880 |
           20130731
          Length = 402

 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 122/267 (45%), Gaps = 10/267 (3%)

Query: 22  TKAFEDTEVDILNWTNKGD--IASNKNEDPDATEYSSSFADTTSEAENDARXXXXXXXXX 79
            K  +D EV+I    N G   +  +  ED D TE +SSF DT S +EN A          
Sbjct: 49  CKGDKDVEVNITECKNSGKALMVLDFGED-DVTESASSFGDTGSGSEN-AVTASYGDPEV 106

Query: 80  XXXXXXXXXFGAIF-----PISSKKMKLSDHWKNFIQPIRWRCKWVELKLKQFESQALKY 134
                    F ++       +  +K + +DHWK FI PI WRCKW+ELKL+   SQ  KY
Sbjct: 107 ESQMSSDSAFSSMCDDWHESVRRRKKRTTDHWKRFISPITWRCKWIELKLRSLHSQERKY 166

Query: 135 SEELAEYDKRKHGKPDHFTLEEKGSKSFPFLNDVYXXXXXXXXXXXXVEETPDLASYTSH 194
            +ELA  +  K     H TL+  G KS P    ++            VEE  DLAS+ S+
Sbjct: 167 EKELAALNYTKQLDFSHLTLDGSGIKSVPISGRMHRNKIMKRKKRVRVEEKCDLASHMSN 226

Query: 195 HVLFSYLENKKSDADGALADDFDNPVIKEACEDSTDRVGDDDEQSFFEFSEADASLEQIL 254
           H LFSY E    + +  L D     +  E  E+  +     D +   ++ + D S   I+
Sbjct: 227 HTLFSYYEKANCNVEVGLGDSHKVAIGAEI-ENLVEFKSSVDLRYSQDYYDNDKSWNDII 285

Query: 255 WSIDLMQSRVHKMKNDVDAIMTTNASK 281
             I  +QSRV  +KN  + ++  N  K
Sbjct: 286 QKIIEIQSRVQNLKNRYEKVIGENPGK 312


>Medtr7g007590.1 | hypothetical protein | HC | chr7:1568478-1572061
           | 20130731
          Length = 417

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 30/189 (15%)

Query: 94  PISSKKMKLSDHWKNFIQPIRWRCKWVELKLKQFESQALKYSEELAEYDKRKHGKPDHFT 153
           P+  +K KL+DHW+ +I PI WR KW+ELK+K+  SQA KY EE+A  D++K      F 
Sbjct: 119 PLLLRKKKLTDHWRRYIFPIMWRSKWIELKIKKLNSQAQKYIEEIAAIDQQKQFDFLKFA 178

Query: 154 LEEKGSKSFPFLNDVYXXXXXXXXXXXXVEETPDLASYTSHHVLFSYLENKKSDADGALA 213
           ++  G   F F                     P+L S      LF   ENK    DG + 
Sbjct: 179 VDNFGVNVFCF--------------------DPNLFS------LFCCPENKNQAHDGPV- 211

Query: 214 DDFDNPVIKEACEDSTDRVGDDDEQSFFEFSE-ADASLEQILWSIDLMQSRVHKMKNDVD 272
           + F + V+  A  D+   +  +D  S  +  +  D S   ++ +++ + S+V  +K  +D
Sbjct: 212 EGFHDDVVGNA--DNIGEIKLNDMWSSVDHQKDNDKSFVDMIENVEALLSQVENLKTRID 269

Query: 273 AIMTTNASK 281
            +   N  K
Sbjct: 270 TVKNENPGK 278


>Medtr8g047200.1 | hypothetical protein | LC |
           chr8:18737068-18734869 | 20130731
          Length = 266

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 30/237 (12%)

Query: 115 WRCKWVELKLKQFESQALKYSEELAEYDKRKHGKPDHFTLEEKGSKSFPFLNDVYXXXXX 174
           WR KW+ELK+K+  SQA KY EE+   D++K      F ++  G KS P           
Sbjct: 2   WRSKWIELKIKKLNSQAQKYIEEIVAIDQQKQFDFLKFAVDNFGVKSVP----------- 50

Query: 175 XXXXXXXVEETPDLASYTSHHVLFSYLENKKSDADG---ALADDFDNPVIKEACEDSTDR 231
                  ++ T  +  +     LF   E++    DG      DD    ++ +A   ST  
Sbjct: 51  ---RSEGIQRTKVINLF----FLFCCPESENRAHDGPVEGFHDDVVANILSKASTRSTKP 103

Query: 232 VGDD----DEQSFFEFSEADASLEQILWSIDLMQSRVHKMKNDVDAIMTTNASKISPYEN 287
             ++     E S     + D S   I+ +++ + S+V  +K  +D +   N  K      
Sbjct: 104 AKEEKEYMKETSVDHHKDNDKSFVNIIENVEALLSQVENLKTRIDTVKYENRGKFCSATQ 163

Query: 288 YCFRYDDEGSSSARSPMNSGEI-GDTASVGGVY--NSTQHAPEFDFGDFMMAESTVS 341
                   G +  RS  NS    G    V G +   S+QH  E    D +M ++T+S
Sbjct: 164 SNIVGQSNGFN--RSVHNSASFAGKEIPVPGSFANASSQHKSELYVEDQLMTDNTLS 218