Miyakogusa Predicted Gene
- Lj0g3v0282959.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0282959.1 Non Characterized Hit- tr|I3SP62|I3SP62_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.6,0,RING/U-box,NULL; ZF_RING_1,Zinc finger, RING-type,
conserved site; seg,NULL; RNF5,NULL; Ring finger,,CUFF.18840.1
(248 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g465910.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 171 8e-43
Medtr2g090295.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 160 9e-40
Medtr4g088875.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 148 5e-36
Medtr2g013550.2 | E3 ubiquitin-protein ligase RMA1H1-like protei... 144 7e-35
Medtr2g013550.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 144 7e-35
Medtr2g013550.3 | E3 ubiquitin-protein ligase RMA1H1-like protei... 144 7e-35
Medtr4g088870.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 125 4e-29
Medtr2g090330.1 | zinc finger, C3HC4 type (RING finger) protein ... 117 9e-27
Medtr2g090330.3 | zinc finger, C3HC4 type (RING finger) protein ... 117 9e-27
Medtr2g090330.2 | zinc finger, C3HC4 type (RING finger) protein ... 117 9e-27
Medtr2g090325.1 | zinc finger, C3HC4 type (RING finger) protein ... 112 4e-25
Medtr1g021895.1 | zinc finger, C3HC4 type (RING finger) protein ... 108 5e-24
Medtr1g021895.2 | zinc finger, C3HC4 type (RING finger) protein ... 108 5e-24
Medtr5g019300.1 | zinc finger, C3HC4 type (RING finger) protein ... 104 9e-23
Medtr1g054280.1 | zinc finger, C3HC4 type (RING finger) protein ... 102 5e-22
Medtr7g093390.2 | zinc finger, C3HC4 type (RING finger) protein ... 96 3e-20
Medtr7g093390.3 | zinc finger, C3HC4 type (RING finger) protein ... 96 3e-20
Medtr7g093390.1 | zinc finger, C3HC4 type (RING finger) protein ... 96 3e-20
Medtr7g093390.4 | zinc finger, C3HC4 type (RING finger) protein ... 96 3e-20
Medtr4g029440.1 | zinc finger, C3HC4 type (RING finger) protein ... 94 9e-20
Medtr4g029440.2 | zinc finger, C3HC4 type (RING finger) protein ... 94 1e-19
Medtr1g054210.1 | zinc finger, C3HC4 type (RING finger) protein ... 93 3e-19
Medtr1g054260.1 | zinc finger, C3HC4 type (RING finger) protein ... 90 2e-18
Medtr1g054465.1 | zinc finger, C3HC4 type (RING finger) protein ... 89 3e-18
Medtr2g061230.1 | zinc finger, C3HC4 type (RING finger) protein ... 85 8e-17
Medtr1g015390.1 | peroxisome biogenesis factor 10 | HC | chr1:38... 61 1e-09
Medtr7g084020.1 | RING finger protein | HC | chr7:32376240-32370... 54 1e-07
Medtr7g089190.1 | DNA/RNA helicase | HC | chr7:34885684-34881166... 52 6e-07
Medtr5g068460.1 | zinc finger, C3HC4 type (RING finger) protein ... 49 6e-06
Medtr3g037230.2 | zinc finger, C3HC4 type (RING finger) protein ... 48 1e-05
Medtr3g037230.3 | zinc finger, C3HC4 type (RING finger) protein ... 48 1e-05
Medtr3g037230.1 | zinc finger, C3HC4 type (RING finger) protein ... 48 1e-05
>Medtr8g465910.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr8:23517772-23514789 | 20130731
Length = 244
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 135/232 (58%), Gaps = 27/232 (11%)
Query: 11 EVSPKQKLKSTSAESPISSSDNGC--FDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQ 68
E P K TS + S N FDCNICL+ DPVVT CGHLYCWPCIYKWL +Q
Sbjct: 18 EEKPSLKNWKTSTDVIADSDRNASSGFDCNICLDCVQDPVVTFCGHLYCWPCIYKWLDIQ 77
Query: 69 S--SSAEPDQQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRPPPYNLN 126
S SS Q+ CP+CK+E+S +SLVPLYGRG + + SE K Q+G+ +P+RP
Sbjct: 78 SGISSENEKQKPQCPVCKSELSQSSLVPLYGRGQTMTLSEGKAQQVGIVVPRRP------ 131
Query: 127 AMLTSNRASNPHLGEQLYPSYFHSQSQPLHYQQHYLYGTHGANGLPYLGGAAMTSFFNPV 186
T R+ NP Q P+Y + Q H +Q + + + G+A+ + +
Sbjct: 132 ---TGPRSFNPTTVSQ--PTYQNYQ----HPRQFNSIPSSYPSPMFSTSGSALDNTY--- 179
Query: 187 IGMFGEMVLTRIFGVSDANLFPYPHS----GSGSPRMRRQEMQIDKSLNRVS 234
G+FGEM+ R+FG N++ YP+S G+ +PRMRR MQ+DKSLNR+S
Sbjct: 180 -GIFGEMIYGRMFGNQIENMYTYPNSYSFQGTNNPRMRRHLMQVDKSLNRIS 230
>Medtr2g090295.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:38396296-38393419 | 20130731
Length = 247
Score = 160 bits (405), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 129/234 (55%), Gaps = 21/234 (8%)
Query: 6 FDSNGEVSPKQKLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWL 65
DS E S ++ K SAE+ SS FDCNICLE DPVVTLCGHLYCWPCIYKWL
Sbjct: 14 IDSLEEKSSQEMWKCASAEAISGSSG---FDCNICLECVQDPVVTLCGHLYCWPCIYKWL 70
Query: 66 SVQSSSAEPDQQQ-TCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRP-PPY 123
+ + + E +++ CP+CK+EIS +SLVPLYGRG + S+ Q+G IP RP P
Sbjct: 71 NFHAENQEKQKEEPQCPVCKSEISKSSLVPLYGRGQTTPPSKGNDHQIGSVIPPRPLGPS 130
Query: 124 NLNAMLTSNRASNPHLGEQLYPSYFHSQSQPLHYQQHYLYGTHGANGLPYLGGAAMTSFF 183
+ + S A+N SQ Y HYL + G ++ +
Sbjct: 131 WMTNLPRSLDAANV------------SQHNSRTYHPHYLNHSQRYASPMLNTGGSLPNPL 178
Query: 184 NPVIGMFGEMVLTRIFGVSDANLFPYPHS----GSGSPRMRRQEMQIDKSLNRV 233
+ G+FGEM+ RIFG N++ YP+S G +PR+RR M+ DKSL R+
Sbjct: 179 DTSYGVFGEMIYARIFGNQVTNIYTYPNSYNLTGISNPRIRRHLMRADKSLGRI 232
>Medtr4g088875.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr4:35472873-35474936 | 20130731
Length = 231
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 118/207 (57%), Gaps = 21/207 (10%)
Query: 32 NGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAEISHTS 91
+ CFDCNICL+ AH+PVVTLCGHLYCW CIYKWL VQS+S PD+ CP+CK ISHT
Sbjct: 28 DSCFDCNICLDFAHEPVVTLCGHLYCWSCIYKWLFVQSASLAPDEPPQCPVCKDGISHTK 87
Query: 92 LVPLYGRGTS----NSESESKKLQMGLGIPQRPPPYNLNAMLTSNRASNPHLGEQLYPSY 147
+VPLYGRG + + +S++K + IP RPP + ++L A++P G + Y
Sbjct: 88 MVPLYGRGQTLSRCDRDSDAKPTLEDISIPPRPPASGIQSLLA--MATSPQNGSRQQLPY 145
Query: 148 FHSQSQPLHYQQHYLYGTHGANGLPYLGGAAMTSFFNPVIGMFGEMVLTRIFGVSDANLF 207
+ + QH T+ N P + + +F P+ F +FG ++
Sbjct: 146 RNP-----YQTQHINSSTYQDNDTPQMHN--LGTFMTPLFPQF-------VFGFGNSE-N 190
Query: 208 PYPHSGSGSPRMRRQEMQIDKSLNRVS 234
+ G+ S R RRQEM +KSLNR+S
Sbjct: 191 SHHMVGNSSSRWRRQEMLANKSLNRIS 217
>Medtr2g013550.2 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664172-3662157 | 20130731
Length = 236
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 17 KLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQS-SSAEPD 75
+LK+ + NG FDCNICL+ A++PVVTLCGHLYCWPCIYKWL VQS S D
Sbjct: 10 ELKTIPNSMSEAEESNG-FDCNICLDFANEPVVTLCGHLYCWPCIYKWLHVQSDDSLGSD 68
Query: 76 QQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRPPPYNLNAMLTSNRAS 135
+ CP+CK ISHT++VPLYGRG S +P RP A+L + S
Sbjct: 69 EHPQCPVCKENISHTTMVPLYGRGGHTPPSGKSSCCDDNFVPPRPTASGAQALLATASQS 128
Query: 136 ---------NPHLGEQLYPSYFHSQSQPLHYQQHYLYGTHGANGLPYLGGAAMT--SFFN 184
NP+ G+ L S +H Q Q L GA+MT S +
Sbjct: 129 DQHQRLPYRNPYQGQYLNSSSYHQQEGDATSQMLNL-------------GASMTSRSRHH 175
Query: 185 PVIGMFGEMVLTRIFGVSDANLFPYPHSGSGSPRMRRQEMQIDKSLNRVS 234
V+ MF EM+ + + G + Y G+ S R+RRQE+Q DK LNR+S
Sbjct: 176 TVVRMFEEMIFSGVVGHPPNS---YQMVGNNSSRLRRQELQTDKFLNRIS 222
>Medtr2g013550.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664296-3662157 | 20130731
Length = 236
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 17 KLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQS-SSAEPD 75
+LK+ + NG FDCNICL+ A++PVVTLCGHLYCWPCIYKWL VQS S D
Sbjct: 10 ELKTIPNSMSEAEESNG-FDCNICLDFANEPVVTLCGHLYCWPCIYKWLHVQSDDSLGSD 68
Query: 76 QQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRPPPYNLNAMLTSNRAS 135
+ CP+CK ISHT++VPLYGRG S +P RP A+L + S
Sbjct: 69 EHPQCPVCKENISHTTMVPLYGRGGHTPPSGKSSCCDDNFVPPRPTASGAQALLATASQS 128
Query: 136 ---------NPHLGEQLYPSYFHSQSQPLHYQQHYLYGTHGANGLPYLGGAAMT--SFFN 184
NP+ G+ L S +H Q Q L GA+MT S +
Sbjct: 129 DQHQRLPYRNPYQGQYLNSSSYHQQEGDATSQMLNL-------------GASMTSRSRHH 175
Query: 185 PVIGMFGEMVLTRIFGVSDANLFPYPHSGSGSPRMRRQEMQIDKSLNRVS 234
V+ MF EM+ + + G + Y G+ S R+RRQE+Q DK LNR+S
Sbjct: 176 TVVRMFEEMIFSGVVGHPPNS---YQMVGNNSSRLRRQELQTDKFLNRIS 222
>Medtr2g013550.3 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664165-3662157 | 20130731
Length = 236
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 120/230 (52%), Gaps = 29/230 (12%)
Query: 17 KLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQS-SSAEPD 75
+LK+ + NG FDCNICL+ A++PVVTLCGHLYCWPCIYKWL VQS S D
Sbjct: 10 ELKTIPNSMSEAEESNG-FDCNICLDFANEPVVTLCGHLYCWPCIYKWLHVQSDDSLGSD 68
Query: 76 QQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRPPPYNLNAMLTSNRAS 135
+ CP+CK ISHT++VPLYGRG S +P RP A+L + S
Sbjct: 69 EHPQCPVCKENISHTTMVPLYGRGGHTPPSGKSSCCDDNFVPPRPTASGAQALLATASQS 128
Query: 136 ---------NPHLGEQLYPSYFHSQSQPLHYQQHYLYGTHGANGLPYLGGAAMT--SFFN 184
NP+ G+ L S +H Q Q L GA+MT S +
Sbjct: 129 DQHQRLPYRNPYQGQYLNSSSYHQQEGDATSQMLNL-------------GASMTSRSRHH 175
Query: 185 PVIGMFGEMVLTRIFGVSDANLFPYPHSGSGSPRMRRQEMQIDKSLNRVS 234
V+ MF EM+ + + G + Y G+ S R+RRQE+Q DK LNR+S
Sbjct: 176 TVVRMFEEMIFSGVVGHPPNS---YQMVGNNSSRLRRQELQTDKFLNRIS 222
>Medtr4g088870.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr4:35466967-35468099 | 20130731
Length = 199
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 32 NGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAEISHTS 91
+ CFDC+ICL+ AH+PVVTLCGHL+CW CIYKWL VQ +S PD+ CP+CK +ISHT
Sbjct: 29 DNCFDCHICLDFAHEPVVTLCGHLFCWSCIYKWLFVQRASLAPDEHPQCPVCKHDISHTK 88
Query: 92 LVPLYGRGTSNSESESKKLQMGL---GIPQRPPPYNLNAMLTSNRASNPHLGEQ 142
+VPLYGRG + S + + L IP RPP + ++L + + EQ
Sbjct: 89 MVPLYGRGQTLSSRRGRNRKATLEDISIPPRPPASEIQSLLETRTSPQSDQQEQ 142
>Medtr2g090330.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38425346-38424779 | 20130731
Length = 163
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 70/94 (74%), Gaps = 5/94 (5%)
Query: 27 ISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAE 86
I S+D F+CNICLE DPVVTLCGHLYCWPCIYKW + S+S E +++ CPICK+E
Sbjct: 25 ICSND---FECNICLEHVKDPVVTLCGHLYCWPCIYKW--INSTSWEHNEKPECPICKSE 79
Query: 87 ISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
IS ++LVPLYGRG + S SE + Q G+ +P RP
Sbjct: 80 ISESTLVPLYGRGKTTSSSEGEAHQDGVVVPPRP 113
>Medtr2g090330.3 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38426674-38424779 | 20130731
Length = 166
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 70/94 (74%), Gaps = 5/94 (5%)
Query: 27 ISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAE 86
I S+D F+CNICLE DPVVTLCGHLYCWPCIYKW + S+S E +++ CPICK+E
Sbjct: 28 ICSND---FECNICLEHVKDPVVTLCGHLYCWPCIYKW--INSTSWEHNEKPECPICKSE 82
Query: 87 ISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
IS ++LVPLYGRG + S SE + Q G+ +P RP
Sbjct: 83 ISESTLVPLYGRGKTTSSSEGEAHQDGVVVPPRP 116
>Medtr2g090330.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38426674-38424779 | 20130731
Length = 163
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 70/94 (74%), Gaps = 5/94 (5%)
Query: 27 ISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAE 86
I S+D F+CNICLE DPVVTLCGHLYCWPCIYKW + S+S E +++ CPICK+E
Sbjct: 25 ICSND---FECNICLEHVKDPVVTLCGHLYCWPCIYKW--INSTSWEHNEKPECPICKSE 79
Query: 87 ISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
IS ++LVPLYGRG + S SE + Q G+ +P RP
Sbjct: 80 ISESTLVPLYGRGKTTSSSEGEAHQDGVVVPPRP 113
>Medtr2g090325.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr2:38420153-38419551 | 20130731
Length = 200
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 74/121 (61%), Gaps = 23/121 (19%)
Query: 35 FDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAEISHTSLVP 94
FDCNICLE+ DPVVTLCGHLYCWPCIYKWL+ + +++ CP+CK EIS ++LVP
Sbjct: 18 FDCNICLENVQDPVVTLCGHLYCWPCIYKWLNTR------NEKSQCPVCKLEISESTLVP 71
Query: 95 LYGRGTSNSESESKKLQMGLGIPQRP----------PPYNLNAMLTSNRASNPHLGEQLY 144
LYGRG + S S+ G+ +P RP P + + T +R S L EQL
Sbjct: 72 LYGRGKTTSTSK------GIVVPPRPLGPSSWLGKLSPRSRDNTATVSRPSR-QLREQLT 124
Query: 145 P 145
P
Sbjct: 125 P 125
>Medtr1g021895.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr1:6660200-6658417 | 20130731
Length = 232
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 7/90 (7%)
Query: 31 DNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAEISHT 90
D G F+CNIC + A DP++TLCGHL+CWPC+YKWL S S E CP+CKA I
Sbjct: 26 DAGNFECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHSQSRE------CPVCKAMIEEE 79
Query: 91 SLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
LVPLYGRG ++++ SK + G+ IP RP
Sbjct: 80 KLVPLYGRGKTSTDPRSKSVP-GVNIPHRP 108
>Medtr1g021895.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr1:6660432-6658324 | 20130731
Length = 232
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 7/90 (7%)
Query: 31 DNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAEISHT 90
D G F+CNIC + A DP++TLCGHL+CWPC+YKWL S S E CP+CKA I
Sbjct: 26 DAGNFECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHSQSRE------CPVCKAMIEEE 79
Query: 91 SLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
LVPLYGRG ++++ SK + G+ IP RP
Sbjct: 80 KLVPLYGRGKTSTDPRSKSVP-GVNIPHRP 108
>Medtr5g019300.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr5:7292943-7291465 | 20130731
Length = 239
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 60/91 (65%), Gaps = 7/91 (7%)
Query: 30 SDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAEISH 89
D G F+CNIC + A DPV+TLCGHL+CWPC+Y+WL S S E CP+CKA +
Sbjct: 30 GDVGDFECNICFDLAQDPVITLCGHLFCWPCLYRWLHHHSHSQE------CPVCKALVQE 83
Query: 90 TSLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
LVPLYGRG + ++ +K G+ IP+RP
Sbjct: 84 EKLVPLYGRGKTQTDPRTKSYP-GMEIPRRP 113
>Medtr1g054280.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23323943-23324740 | 20130731
Length = 265
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 8 SNGEVSPKQKLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSV 67
SNG V+ + K S+ FDCNICL+ A +PVVT CGHL+CWPC+Y+WL +
Sbjct: 49 SNGGVALDKTSKKRKNVEKGGGSEGSVFDCNICLDLAKNPVVTCCGHLFCWPCLYRWLHL 108
Query: 68 QSSSAEPDQQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
+SS Q + CP+CK E++ +++P+YG G +N E + L IP RP
Sbjct: 109 RSS-----QTKACPVCKGEVTDKNVIPIYG-GENNVEVRHEDSSSTLQIPSRP 155
>Medtr7g093390.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118841-37122307 | 20130731
Length = 453
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 7 DSNGEVSPKQKLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLS 66
++NG + + K+ D FDCNICL+ A +PV+T CGHL+CW C+Y+WL
Sbjct: 142 NNNGVMEDETLQKNKDDVEKAGGGDGDFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLH 201
Query: 67 VQSSSAEPDQQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
+ S + E CP+CK E++ S+ P+YGRG S E L IP RP
Sbjct: 202 LHSDARE------CPVCKGEVTIKSVTPIYGRGNSTRVLEEDST---LKIPPRP 246
>Medtr7g093390.3 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118841-37121989 | 20130731
Length = 453
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 7 DSNGEVSPKQKLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLS 66
++NG + + K+ D FDCNICL+ A +PV+T CGHL+CW C+Y+WL
Sbjct: 142 NNNGVMEDETLQKNKDDVEKAGGGDGDFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLH 201
Query: 67 VQSSSAEPDQQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
+ S + E CP+CK E++ S+ P+YGRG S E L IP RP
Sbjct: 202 LHSDARE------CPVCKGEVTIKSVTPIYGRGNSTRVLEEDST---LKIPPRP 246
>Medtr7g093390.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118817-37121936 | 20130731
Length = 453
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 7 DSNGEVSPKQKLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLS 66
++NG + + K+ D FDCNICL+ A +PV+T CGHL+CW C+Y+WL
Sbjct: 142 NNNGVMEDETLQKNKDDVEKAGGGDGDFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLH 201
Query: 67 VQSSSAEPDQQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
+ S + E CP+CK E++ S+ P+YGRG S E L IP RP
Sbjct: 202 LHSDARE------CPVCKGEVTIKSVTPIYGRGNSTRVLEEDST---LKIPPRP 246
>Medtr7g093390.4 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118817-37122307 | 20130731
Length = 453
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 7 DSNGEVSPKQKLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLS 66
++NG + + K+ D FDCNICL+ A +PV+T CGHL+CW C+Y+WL
Sbjct: 142 NNNGVMEDETLQKNKDDVEKAGGGDGDFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLH 201
Query: 67 VQSSSAEPDQQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
+ S + E CP+CK E++ S+ P+YGRG S E L IP RP
Sbjct: 202 LHSDARE------CPVCKGEVTIKSVTPIYGRGNSTRVLEEDST---LKIPPRP 246
>Medtr4g029440.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:10176191-10172035 | 20130731
Length = 431
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 27 ISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAE 86
+ S FDCNICL+ A DPV+T CGHL+CWPC Y+ S + E CP+CK E
Sbjct: 124 VEESSGNFFDCNICLDIARDPVLTCCGHLFCWPCFYQLSYAYSKAKE------CPVCKGE 177
Query: 87 ISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
++ + ++P+YG G + + + + GL +P RP
Sbjct: 178 VTESGIIPIYGHGNGGGDCQMEMKEAGLRVPPRP 211
>Medtr4g029440.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:10176191-10172035 | 20130731
Length = 425
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 27 ISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAE 86
+ S FDCNICL+ A DPV+T CGHL+CWPC Y+ S + E CP+CK E
Sbjct: 118 VEESSGNFFDCNICLDIARDPVLTCCGHLFCWPCFYQLSYAYSKAKE------CPVCKGE 171
Query: 87 ISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRP 120
++ + ++P+YG G + + + + GL +P RP
Sbjct: 172 VTESGIIPIYGHGNGGGDCQMEMKEAGLRVPPRP 205
>Medtr1g054210.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23234618-23235307 | 20130731
Length = 229
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 19 KSTSAESPISSSDNGC------FDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSA 72
KS ++E + DNGC +DCNICL A DPVVT CGHL+CWPC+Y+WL S
Sbjct: 101 KSKTSEKK-ENVDNGCGSKGGFYDCNICLGLAKDPVVTRCGHLFCWPCLYRWLHSGSYG- 158
Query: 73 EPDQQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRPPPYNLNAMLTSN 132
+ CP+CK E+ ++P+YG G ++ E + L IP+RP ++ +
Sbjct: 159 ----NKECPVCKGEVKDKKVIPIYG-GGNDVEVGHEDSSSTLQIPRRPNARRKDSNARQS 213
Query: 133 RASN-PHLGEQL 143
R HLG +
Sbjct: 214 REGRVRHLGRDI 225
>Medtr1g054260.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23305014-23305622 | 20130731
Length = 202
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 30 SDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQS--SSAEPDQQQTCPICKAEI 87
+D G +DCNIC A DPV+T CGHL+CWPC+Y+WL+ +S S + CP+CK E+
Sbjct: 82 NDRGFYDCNICFVLAKDPVLTCCGHLFCWPCLYRWLNTKSPLSFTRSSLAKECPVCKGEV 141
Query: 88 SHTSLVPLYGRGTS-----NSESESKKLQMGLGIPQRP 120
+ ++ P+YG G +S S LQ IP RP
Sbjct: 142 TDKTVTPIYGGGNDVEVVRAEDSSSTTLQ----IPPRP 175
>Medtr1g054465.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23552590-23553177 | 20130731
Length = 195
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 11 EVSPKQKLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQS- 69
++ K K + + +D G +DCNIC + A +PV+T CGHL+CWPC+Y+WL+ +S
Sbjct: 31 DIYRKTSEKKENVDEKDCGNDRGFYDCNICFDLAKEPVLTCCGHLFCWPCLYRWLNTKSP 90
Query: 70 -SSAEPDQQQTCPICKAEISHTSLVPLYGRG-----TSNSESESKKLQMGLGIPQRP 120
S + CP+CK E++ ++ P+YG G +S S LQ IP RP
Sbjct: 91 LSFRRSSLAKECPVCKGEVTDKTVTPIYGGGNEVEVVRAEDSSSTTLQ----IPPRP 143
>Medtr2g061230.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:25954060-25951976 | 20130731
Length = 237
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 35 FDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAEISHTSLVP 94
FDCNICL++A++PV+T CGHL+CW C Y+ S++ E CP+C+ E+ T ++P
Sbjct: 107 FDCNICLDTANNPVLTCCGHLFCWECFYQLAYAYSNAKE------CPVCEGEVLDTDIIP 160
Query: 95 LYGRGTSNSESESKKLQMGLGIPQRP 120
+YG G + S + + L +P RP
Sbjct: 161 VYGNGMIDDISRLELKETCLRVPDRP 186
>Medtr1g015390.1 | peroxisome biogenesis factor 10 | HC |
chr1:3820269-3810303 | 20130731
Length = 420
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 29 SSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAEIS 88
++ NG C +CL + P T CGH++CW CI +W +++ CP+C+ I+
Sbjct: 358 NATNGVSKCTLCLSNRQHPTATSCGHVFCWNCITEWC---------NEKPECPLCRTPIT 408
Query: 89 HTSLVPLY 96
H+SLV +Y
Sbjct: 409 HSSLVCVY 416
>Medtr7g084020.1 | RING finger protein | HC | chr7:32376240-32370124
| 20130731
Length = 744
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 37 CNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAEISHTSLVPLY 96
C ICLE P +T CGH++C+PCI ++L + + D+ + CP+C IS L L+
Sbjct: 222 CPICLEHPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDRWKRCPLCFVTISVKDLYTLH 281
>Medtr7g089190.1 | DNA/RNA helicase | HC | chr7:34885684-34881166 |
20130731
Length = 822
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 31 DNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAEISHT 90
D FDC ICL D V+T C H++C CI K L +SS CP+C+ +S T
Sbjct: 567 DGEDFDCPICLSPPTDIVITCCAHIFCRECILKTLQRSNSS--------CPLCRRSLSET 618
Query: 91 SL 92
L
Sbjct: 619 EL 620
>Medtr5g068460.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr5:28979430-28987791 | 20130731
Length = 481
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 37 CNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQTCPICKAEISHTSLVPLY 96
C IC E H P++ C H++C C+ +W ++++TCP+C+A + L +
Sbjct: 420 CAICQEKMHSPILLRCKHIFCEDCVSEWF---------ERERTCPLCRALVKAADL-RTF 469
Query: 97 GRGTSN 102
G G+++
Sbjct: 470 GDGSTS 475
>Medtr3g037230.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr3:13636031-13627006 | 20130731
Length = 433
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 20 STSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQT 79
ST + I N FDC +CL+ ++PV T CGH +C C+++ + D+
Sbjct: 126 STGRSTHIQPERNDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSM---------DRGNR 176
Query: 80 CPICKA 85
CP+C+
Sbjct: 177 CPLCRT 182
>Medtr3g037230.3 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr3:13635998-13627006 | 20130731
Length = 433
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 20 STSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQT 79
ST + I N FDC +CL+ ++PV T CGH +C C+++ + D+
Sbjct: 126 STGRSTHIQPERNDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSM---------DRGNR 176
Query: 80 CPICKA 85
CP+C+
Sbjct: 177 CPLCRT 182
>Medtr3g037230.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr3:13637290-13627006 | 20130731
Length = 480
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 20 STSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQSSSAEPDQQQT 79
ST + I N FDC +CL+ ++PV T CGH +C C+++ + D+
Sbjct: 173 STGRSTHIQPERNDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSM---------DRGNR 223
Query: 80 CPICKA 85
CP+C+
Sbjct: 224 CPLCRT 229