Miyakogusa Predicted Gene

Lj0g3v0282799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0282799.1 tr|G3XKQ9|G3XKQ9_ORYSJ LAX PANICLE2 OS=Oryza
sativa subsp. japonica GN=LAX2 PE=2
SV=1,43.64,2e-17,seg,NULL,CUFF.18829.1
         (264 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g096210.1 | E3 ubiquitin protein ligase DRIP2, putative | ...    78   1e-14
Medtr7g096210.2 | E3 ubiquitin protein ligase DRIP2, putative | ...    78   1e-14
Medtr7g115240.1 | E3 ubiquitin protein ligase DRIP2, putative | ...    77   2e-14
Medtr7g021270.1 | hypothetical protein | HC | chr7:6706427-67050...    62   4e-10
Medtr1g093150.1 | hypothetical protein | LC | chr1:33789663-3378...    55   7e-08

>Medtr7g096210.1 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:38583482-38588867 | 20130731
          Length = 429

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 68/108 (62%), Gaps = 6/108 (5%)

Query: 157 LWFTLLSSTNRSGEA-LPQIPKAYIRVTDESMTVFMVKKYLVRKLGLSDEAEIDISCMGQ 215
           +WF+L++S N+ G+  LPQIP +Y+R+ D S+ V  ++KYL++KL L++E EI+I CMGQ
Sbjct: 320 IWFSLVASENQEGDTPLPQIPASYVRIKDGSVPVSFIQKYLMKKLDLTNETEIEIICMGQ 379

Query: 216 SLSHILTLKQVRDTIWLPRLVESVNSSMPLSIGDSHDMSINHLMSLLY 263
            +   LTL  + + +WL     S +  +P  IG S     + +M L Y
Sbjct: 380 PVLPTLTLHNLVE-LWLDSTA-STSHRIPAIIGSSAK---DFVMVLAY 422


>Medtr7g096210.2 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:38583482-38588861 | 20130731
          Length = 428

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 68/108 (62%), Gaps = 6/108 (5%)

Query: 157 LWFTLLSSTNRSGEA-LPQIPKAYIRVTDESMTVFMVKKYLVRKLGLSDEAEIDISCMGQ 215
           +WF+L++S N+ G+  LPQIP +Y+R+ D S+ V  ++KYL++KL L++E EI+I CMGQ
Sbjct: 319 IWFSLVASENQEGDTPLPQIPASYVRIKDGSVPVSFIQKYLMKKLDLTNETEIEIICMGQ 378

Query: 216 SLSHILTLKQVRDTIWLPRLVESVNSSMPLSIGDSHDMSINHLMSLLY 263
            +   LTL  + + +WL     S +  +P  IG S     + +M L Y
Sbjct: 379 PVLPTLTLHNLVE-LWLDSTA-STSHRIPAIIGSSAK---DFVMVLAY 421


>Medtr7g115240.1 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:47590926-47596695 | 20130731
          Length = 428

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 71/114 (62%), Gaps = 7/114 (6%)

Query: 151 NPHQSGLWFTLLSSTNRSGE-ALPQIPKAYIRVTDESMTVFMVKKYLVRKLGLSDEAEID 209
           N   + +WFTL++S +++GE +LPQI   Y+R+ D ++ V  ++KYL++KL L+ EAE++
Sbjct: 314 NRKNNPIWFTLVASEDQNGEVSLPQISACYLRIKDGTVPVSYIQKYLMKKLNLASEAEVE 373

Query: 210 ISCMGQSLSHILTLKQVRDTIWLPRLVESVNSSMPLSIGDSHDMSINHLMSLLY 263
           I C GQS+   L L  + D +W      S +  +P S+G S   + + +M+L Y
Sbjct: 374 IMCRGQSVLPTLQLHNLVD-LWF--CTASTSKKLPASVGSS---AKDFVMALSY 421


>Medtr7g021270.1 | hypothetical protein | HC | chr7:6706427-6705001
           | 20130731
          Length = 366

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 2/60 (3%)

Query: 150 RNPHQSGLWFTLLSSTNRSGEA-LPQIPKAYIRVTDESMTVFMVKKYLVRKLGLSDEAEI 208
           R PH SG+WF L +S N+  E  LPQIPK Y+R+ D  MTV ++ KYLV KL L  E+E+
Sbjct: 303 RRPH-SGIWFMLQASQNQLKEPFLPQIPKNYLRIKDGRMTVRLLFKYLVSKLKLESESEV 361


>Medtr1g093150.1 | hypothetical protein | LC |
           chr1:33789663-33787293 | 20130731
          Length = 411

 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 63/107 (58%), Gaps = 6/107 (5%)

Query: 157 LWFTLLSSTNRSGEALPQIPKAYIRVTDESMTVFMVKKYLVRKLGLSDEAEIDISCMGQS 216
           +WF+L++S  +   ALPQI   YI V + S+ V  +KK+LV+KL L+ EAE++I   G+ 
Sbjct: 306 IWFSLVASKEQDVGALPQISSPYIMVRNGSLPVSHIKKHLVQKLDLASEAEVEILLRGKP 365

Query: 217 LSHILTLKQVRDTIWLPRLVESVNSSMPLSIGDSHDMSINHLMSLLY 263
           +   + L+ + + +WL  + +  N  +  S+G S   + + +M L Y
Sbjct: 366 VLCSMQLQNLVE-MWLETMPK--NERIQTSVGSS---AKDFVMVLSY 406