Miyakogusa Predicted Gene
- Lj0g3v0282539.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0282539.1 Non Characterized Hit- tr|I1K4D0|I1K4D0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95.9,0,WD40
repeat-like,WD40-repeat-containing domain; no description,WD40/YVTN
repeat-like-containing doma,CUFF.18803.1
(536 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g089380.1 | damaged DNA-binding protein 1A | HC | chr8:371... 1062 0.0
Medtr4g115810.1 | splicing factor 3B subunit-like protein | HC |... 95 2e-19
Medtr1g115525.1 | splicing factor 3B subunit-like protein | HC |... 92 1e-18
Medtr4g115500.1 | splicing factor 3B subunit-like protein | HC |... 89 2e-17
Medtr6g013290.1 | splicing factor 3B subunit 3 | HC | chr6:41894... 88 2e-17
Medtr6g461810.1 | cleavage and polyadenylation specificity facto... 87 3e-17
Medtr7g107350.1 | pre-mRNA-splicing factor RSE1-like protein | H... 53 9e-07
Medtr7g107350.3 | pre-mRNA-splicing factor RSE1-like protein | H... 53 9e-07
>Medtr8g089380.1 | damaged DNA-binding protein 1A | HC |
chr8:37153843-37142364 | 20130731
Length = 1089
Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/536 (94%), Positives = 525/536 (97%)
Query: 1 MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTS 60
MWTDISVR+FSLP+LNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTS
Sbjct: 554 MWTDISVRLFSLPELNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTS 613
Query: 61 SGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 120
+GELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM
Sbjct: 614 TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 673
Query: 121 CPFNSAAIPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQSRTFAICSLK 180
CPFNSAA PDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQ+RTFAICSLK
Sbjct: 674 CPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQTRTFAICSLK 733
Query: 181 YNHTSAEESESHFVRLLDDQTFEFISTYPLDTYEYGCFIISCSFSDDNNVYYCVGTAYVL 240
YN SAEESE HFVRLLDDQTF+FIS YPLDTYEYGCFIISCSFSDDNNVYYCVGTAYVL
Sbjct: 734 YNSASAEESEMHFVRLLDDQTFDFISVYPLDTYEYGCFIISCSFSDDNNVYYCVGTAYVL 793
Query: 241 PEESEPTKGRILVFTVDDGQLQLIAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRD 300
PEE+EPTKGRILVF+V++G+LQL+AEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLR+
Sbjct: 794 PEENEPTKGRILVFSVEEGKLQLVAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRE 853
Query: 301 DGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 360
DGT ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW
Sbjct: 854 DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 913
Query: 361 MSAVEILDDDVYLGTENSFNLFTVRKNSEGATDEERGRLEVIGEYHLGEFVNRFRHGSLV 420
MSAVEILDDDVYLG ENSFNLFTVRKNSEGATDEERGRLEV GEYHLGEF+NRFRHGSLV
Sbjct: 914 MSAVEILDDDVYLGAENSFNLFTVRKNSEGATDEERGRLEVAGEYHLGEFINRFRHGSLV 973
Query: 421 MRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEQWR 480
MRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEQWR
Sbjct: 974 MRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEQWR 1033
Query: 481 SFNNEKKTAEARNFLDGDLIESFLDLNRSKMDEVSKALDVSVEELCKRVEELTRLH 536
SFNNEKKT EARNFLDGDLIESFLDL RSKMDE+SKA++VSVEEL KRVEELTRLH
Sbjct: 1034 SFNNEKKTVEARNFLDGDLIESFLDLKRSKMDEISKAMEVSVEELAKRVEELTRLH 1089
>Medtr4g115810.1 | splicing factor 3B subunit-like protein | HC |
chr4:47855052-47860569 | 20130731
Length = 1225
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 129/573 (22%), Positives = 227/573 (39%), Gaps = 104/573 (18%)
Query: 42 YLLCALGDGHLLNFMLNTSSGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 101
+L L G L +++T +G L+D + LG + L + S RP + Y
Sbjct: 670 FLSAGLQSGVLSRTVVDTVTGLLSDARSRFLGLKAPKLFPIILGRKCAMLCLSSRPWLGY 729
Query: 102 SSNKKLLYSNVNLKEVSHMCPFNSAAIPDSLAIAKEGELTIGTIDDIQKLHIRT-IPLGE 160
L + ++ + + + F+S + + L I T++ + + +T IPL
Sbjct: 730 IHQGHFLLTPLSYETLEYAASFSSDQCLEGVVSVSGEALRIFTVERLGETFNQTVIPLRY 789
Query: 161 HARRICHQEQSRTFAICSLKYNHTSAEESES----------------------------- 191
R++ Q + + + +A+E E+
Sbjct: 790 TPRKLVLQPKRKLLVVIESDQGALTAKEREAARKECFEAAQTGENATGSEDQMENDGEDE 849
Query: 192 ---------HF-------------VRLLDDQTFEFISTYPLDTYEYGCFIISCSFSD-DN 228
H+ +R+LD +T L E I + +F D +
Sbjct: 850 DQGDSLSDEHYGYPKSESDKWVSCIRVLDPRTGNTTCLLELQENEAAFSICTVNFHDKEY 909
Query: 229 NVYYCVGTAYVL---PEESEPTKGRILVFT-VDDGQ-LQLIAEKETKGAVYCLNAFNGKL 283
VGTA L P+ S T G I ++ +DDG+ L+L+ + + +G L F G+L
Sbjct: 910 GTLLAVGTAKGLQFTPKRSL-TVGFIHIYRFLDDGRSLELLHKTQVEGVPLALCQFQGRL 968
Query: 284 LAAINQKIQLYKWVLRDDGTHELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIY 342
LA I ++LY D G L +C + +++ + D I VGD+ +S Y
Sbjct: 969 LAGIGPVLRLY-----DLGKRRLLRKCENKSFPISIVSIHAYRDRIYVGDIQESFHYCKY 1023
Query: 343 KHEEGAIEERARDYNANWMSAVEILDDDVYLGTENSFNLFTVR-----------KNSEGA 391
+ +E + A D W++A +D D G + N+F R + G
Sbjct: 1024 RRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNIFFARLPQDVSDEVEEDPTSGK 1083
Query: 392 TDEERGRL-------EVIGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIG 444
E+G+L E I ++H+G+ + + +LV G +++GT+ G +G
Sbjct: 1084 IKWEQGKLNGALNKVEEIVQFHVGDVITSLQKAALV-------PGGGECIVYGTVMGCVG 1136
Query: 445 VIASLPHEQYV-FLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTAEARNFLDGDLIESF 503
+ + V F L+ ++R+ + G H +RS ++ LDGDL E F
Sbjct: 1137 ALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRS-----AYFPVKDVLDGDLCEQF 1191
Query: 504 ----LDLNRSKMDEVSKALDVSVEELCKRVEEL 532
+DL R DE LD + E+ K++EEL
Sbjct: 1192 PTLPMDLQRKIADE----LDRTPGEILKKLEEL 1220
>Medtr1g115525.1 | splicing factor 3B subunit-like protein | HC |
chr1:52208212-52213176 | 20130731
Length = 1190
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 124/563 (22%), Positives = 221/563 (39%), Gaps = 98/563 (17%)
Query: 49 DGHLLNFMLNTSSGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLL 108
+G L +++ +G L+D + + LG +P L + + S RP + Y L
Sbjct: 642 NGVLSRTVVDMVTGLLSDSRSLFLGLRPPKLFPIIVRGKRAMLCLSSRPWLGYIHQGHFL 701
Query: 109 YSNVNLKEVSHMCPFNS-AAIPDSLAIAKEGELTIGTIDDIQKLHIRT-IPLGEHARRIC 166
+ ++ + + F+S + +A A E L I TI+ + + T IPL R+
Sbjct: 702 LTPLSYETLEFAASFSSDQCVEGVVAFAGEA-LRIFTIERLGETFNETVIPLRYTPRKFV 760
Query: 167 HQEQSRTFAICSLKYNHTSAEESES----------------------------------- 191
Q + + + +AEE E+
Sbjct: 761 LQPKRKLLVVIESDQGAFTAEEREAAKKECFEAAQAGENGTESADQMENGGEDEDKDDPL 820
Query: 192 ---HF-------------VRLLDDQTFEFISTYPLDTYEYGCFIISCSFSD-DNNVYYCV 234
H+ +R+LD +T L E + + +F D + V
Sbjct: 821 SDEHYGYPKAESDKWASCIRILDPKTGNTTCLLELQDNEAAFSVCTVNFHDKEYGTLLAV 880
Query: 235 GTAYVL---PEESEPTKGRILV--FTVDDGQLQLIAEKETKGAVYCLNAFNGKLLAAINQ 289
GTA L P S T G I + F D L+L+ + + +G L+ F G+LLA I
Sbjct: 881 GTAKGLQFTPRRSL-TAGFIHIYRFLEDGSSLELLHKTQVEGVPLALSQFQGRLLAGIGP 939
Query: 290 KIQLYKWVLRDDGTHELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGA 348
++ Y D G L +C + + +QT D I VGD+ +S Y+ +E
Sbjct: 940 VLRFY-----DLGKRRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQ 994
Query: 349 IEERARDYNANWMSAVEILDDDVYLGTENSFNLFTVR------------------KNSEG 390
+ A D W++A +D D G + N++ VR K +G
Sbjct: 995 LYIFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQG 1054
Query: 391 ATDEERGRLEVIGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLP 450
+ ++E I ++H+G+ ++ + SL+ G +++GT+ G IG + +
Sbjct: 1055 KLNGAPNKVEEIVQFHVGDVISCLQKASLI-------PGGGECILYGTVMGSIGALHAFT 1107
Query: 451 HEQYV-FLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTAEARNFLDGDLIESFLDLNRS 509
V F L+ ++R+ + G H +RS ++ +DGDL E F L
Sbjct: 1108 SRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLPMD 1162
Query: 510 KMDEVSKALDVSVEELCKRVEEL 532
+++ LD + E+ K++EE+
Sbjct: 1163 LQRKIADELDRTPGEILKKLEEV 1185
>Medtr4g115500.1 | splicing factor 3B subunit-like protein | HC |
chr4:47719322-47713420 | 20130731
Length = 1225
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 123/573 (21%), Positives = 223/573 (38%), Gaps = 104/573 (18%)
Query: 42 YLLCALGDGHLLNFMLNTSSGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 101
+L L +G L +++ +G L+D + LG + L + + S RP + Y
Sbjct: 670 FLNAGLQNGVLSRTVVDMVTGLLSDTRSRFLGLKAPKLFPIIVRGKRAMLCLSSRPWLGY 729
Query: 102 SSNKKLLYSNVNLKEVSHMCPFNSAAIPDSLAIAKEGELTIGTIDDI-QKLHIRTIPLGE 160
L + ++ + + + F+S + + L I T++ + + + IPL
Sbjct: 730 IHQGHFLLTPLSYETLEYAASFSSDQCFEGVVSVASEALRIFTVERLGETFNQNVIPLRY 789
Query: 161 HARRICHQEQSRTFAICSLKYNHTSAEESES----------------------------- 191
R+ Q + + + +AEE E+
Sbjct: 790 TPRKFVLQPKRKLLVVIESDQGALTAEEREAARKECFEAAHAGENKTGSEDQMENGGEDE 849
Query: 192 ---------HF-------------VRLLDDQTFEFISTYPLDTYEYGCFIISCSFSD-DN 228
H+ +R+LD +T L E I + +F D +
Sbjct: 850 DNDDSLSDEHYGYPKSESDKWVSCIRVLDPRTGNTTCLLELQENEAAFSICTVNFHDKEY 909
Query: 229 NVYYCVGTAYVL---PEESEPTKGRILVFT-VDDGQ-LQLIAEKETKGAVYCLNAFNGKL 283
VGTA L P+ S T G I ++ +DDG+ L+L+ + + +G L F G+L
Sbjct: 910 GTLLAVGTAKGLQFTPKRSL-TAGFIHIYRFLDDGRSLELLHKTQVEGVPLALCQFQGRL 968
Query: 284 LAAINQKIQLYKWVLRDDGTHELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIY 342
LA I ++LY D G L +C + ++ + D I VG + +S Y
Sbjct: 969 LAGIGPVLRLY-----DLGKRRLLRKCENKSFPSSIVSIHAYRDRIYVGGIQESFHYCKY 1023
Query: 343 KHEEGAIEERARDYNANWMSAVEILDDDVYLGTENSFNLFTVR----------------- 385
+ +E + A D W+++ +D D G + N+F R
Sbjct: 1024 RRDENQLYIFADDSVPRWLTSSYHIDFDTMAGADKFGNIFFARLPQDVSDEIEEDPTGGK 1083
Query: 386 -KNSEGATDEERGRLEVIGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIG 444
K +G + ++E I ++H+G+ + + SLV G +++GT+ G +G
Sbjct: 1084 IKWEQGKLNGAPNKVEEIVQFHVGDVITSLQKASLV-------PGGGECIVYGTVMGSVG 1136
Query: 445 VIASLPHEQYV-FLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTAEARNFLDGDLIESF 503
+ + V F L+ ++R+ + G H +RS ++ +DGDL E F
Sbjct: 1137 ALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQF 1191
Query: 504 ----LDLNRSKMDEVSKALDVSVEELCKRVEEL 532
+DL R DE LD + E+ K++EE+
Sbjct: 1192 PTLPMDLQRKIADE----LDRTPGEILKKLEEV 1220
>Medtr6g013290.1 | splicing factor 3B subunit 3 | HC |
chr6:4189472-4192971 | 20130731
Length = 702
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 121/524 (23%), Positives = 217/524 (41%), Gaps = 62/524 (11%)
Query: 48 GDGHLLNFMLNTSSGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 107
G+G L +++ +G L+D + LG +P L + + S RP + Y
Sbjct: 197 GNGVLSRTVVDMVTGLLSDSRSPFLGLRPPKLFPIVVRGKRAMLCLSSRPWLGYIHQGHF 256
Query: 108 LYSNVNLKEVSHMCPFNS-AAIPDSLAIAKEGELTIGTIDDIQKLHIRT-IPLGEHARRI 165
L + ++ + + F+S + +A+A E L I TI+ + + T IPL +
Sbjct: 257 LLTPLSYETLEFAASFSSDQCVEGVVALAGEA-LRIFTIERLGETFNETVIPLRYTPMKF 315
Query: 166 CHQEQSRTFAICSLKYNHTSAEESES---------------HF-------------VRLL 197
Q + + + +AEE E+ H+ +R+L
Sbjct: 316 VLQPKRKLLVVIESDQGAFTAEEREANGGEDEDKDDPLSDEHYGYPKAESDKWASCIRIL 375
Query: 198 DDQTFEFISTYPLDTYEYGCFIISCSFSD-DNNVYYCVGTAYVL---PEESEPTKGRILV 253
D +T L E + +F D + VGTA L P S T G I +
Sbjct: 376 DPKTGNTTCLLELQDNEAAFSGCTVNFHDKEYGTLLDVGTAKGLQFTPRRSL-TAGFIHI 434
Query: 254 FT-VDDGQ-LQLIAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSECG 311
+ ++DG+ L+L+ + + +G L+ F G+LLA I ++ Y D G L +
Sbjct: 435 YRFLEDGRSLELLHKTQVEGVPLALSQFQGRLLAGIGPVLRFY-----DLGKRRLLRK-- 487
Query: 312 HHGHILA---LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 368
+ + + +QT D I VGD +S Y+ +E + A D W++A +D
Sbjct: 488 YENKLFPNTIVSIQTYRDRIYVGDTQESFHYCKYRWDENQLYIFADDCVPRWLTASYHID 547
Query: 369 DDVYLGTENSFNLFTVRKNSEGATDEERGRLEVIGEYHLGEFVNRFRHGSLVMRLPDSDV 428
D G E + K +G + ++E I ++H+G+ ++ + SL+
Sbjct: 548 FDTMAGIEEDPTGGRI-KWEQGKLNGAPNKVEEIVQFHVGDVISCLQKASLI-------P 599
Query: 429 GQIPTVIFGTINGVIGVIASLPHEQYV-FLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKK 487
G ++ GT+ G IG + + V F L+ ++R+ + G H +RS
Sbjct: 600 GGGECILNGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRS-----A 654
Query: 488 TAEARNFLDGDLIESFLDLNRSKMDEVSKALDVSVEELCKRVEE 531
++ +DGDL E F L +++ LD + E+ K++EE
Sbjct: 655 YFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTRGEILKKLEE 698
>Medtr6g461810.1 | cleavage and polyadenylation specificity factor
subunit 1 | HC | chr6:21540099-21517843 | 20130731
Length = 1448
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 49/348 (14%)
Query: 178 SLKYNHTSAEESESHF-------VRLLDDQ----TFEFISTYPLDTYEYGCFIISCSF-- 224
+L N + ++HF VR+++ + ++ +T P+ + E + +
Sbjct: 1060 NLTENQNLNSDDQNHFYSIEEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLMN 1119
Query: 225 --SDDNNVYYCVGTAYVLPEESEPTKGRILVFTVD---DGQLQLIAE---KETKGAVYCL 276
S +N +GTAYV E+ +GRIL+FT+ D L++E KE KGA+ +
Sbjct: 1120 TSSKENETLLAIGTAYVQGEDVA-ARGRILLFTLGKNTDNPQTLVSEVYSKELKGAISAM 1178
Query: 277 NAFNGKLLAAINQKIQLYKWVLRDDGTHELQSECGHHG---HILALYVQTRGDFIVVGDL 333
A G LL A KI L+KW GT EL H+++L + +FI++GD+
Sbjct: 1179 AALQGHLLVASGPKIILHKWT----GT-ELNGVAFFDVPPLHVVSLNIVK--NFILIGDI 1231
Query: 334 MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVYLG---TENSFNLFTVRKNSEG 390
KSI L +K + + A+D+ + A E L D L +++ N+ +
Sbjct: 1232 HKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKM 1291
Query: 391 ATDEERGRLEVIGEYHLGEFVNRF----------RHGSLVMRLPDSDVGQIPTVIFGTIN 440
+ +L E+H+G V +F R GS P SD ++F T++
Sbjct: 1292 LESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRTGSA----PGSDKTNRFALLFSTLD 1347
Query: 441 GVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKT 488
G IG IA L + L+ LQ L + V GL+ +R F++ K
Sbjct: 1348 GSIGCIAPLDEITFRRLQSLQKKLIDAVSHVAGLNPRAFRLFHSNGKA 1395
>Medtr7g107350.1 | pre-mRNA-splicing factor RSE1-like protein | HC |
chr7:43803096-43788689 | 20130731
Length = 1370
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 328 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVYLGTENSFNLFTVRKN 387
I VGD I Y E +E+ D + ++ ++DD+ + ++ ++ + +
Sbjct: 1134 IAVGDNRDGILFFSYHEEARKLEQLYGDPSQRLVADCILMDDNTAIVSDRKGSIAVLCSD 1193
Query: 388 ----SEGATDEERGRLEVIGEYHLGEFVNRFRHGSLVMRLPDSDV---GQIP-------- 432
A+ E RL Y + E R GS RLP D+ G P
Sbjct: 1194 HLEAPNNASTECNLRLSC--AYFMAEIAVSIRKGSYSYRLPADDLLSGGIGPKTNVDSLQ 1251
Query: 433 -TVIFGTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNNEKKTA 489
T++ T+ G I + L E+Y LE +Q+ L + V G H ++RS N T
Sbjct: 1252 NTILVSTLLGSIMIFIPLSREEYELLEAVQARLAVHHLTAPVLGNDHNEFRSRENPVGTP 1311
Query: 490 EARNFLDGDLIESFLDLNRSKMDEV--SKALDV 520
+ LDGD++ FL+L + + + + LDV
Sbjct: 1312 K---ILDGDMLTQFLELTNMQQNNILSMEPLDV 1341
>Medtr7g107350.3 | pre-mRNA-splicing factor RSE1-like protein | HC |
chr7:43800656-43788689 | 20130731
Length = 1196
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 328 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVYLGTENSFNLFTVRKN 387
I VGD I Y E +E+ D + ++ ++DD+ + ++ ++ + +
Sbjct: 960 IAVGDNRDGILFFSYHEEARKLEQLYGDPSQRLVADCILMDDNTAIVSDRKGSIAVLCSD 1019
Query: 388 ----SEGATDEERGRLEVIGEYHLGEFVNRFRHGSLVMRLPDSDV---GQIP-------- 432
A+ E RL Y + E R GS RLP D+ G P
Sbjct: 1020 HLEAPNNASTECNLRLSC--AYFMAEIAVSIRKGSYSYRLPADDLLSGGIGPKTNVDSLQ 1077
Query: 433 -TVIFGTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNNEKKTA 489
T++ T+ G I + L E+Y LE +Q+ L + V G H ++RS N T
Sbjct: 1078 NTILVSTLLGSIMIFIPLSREEYELLEAVQARLAVHHLTAPVLGNDHNEFRSRENPVGTP 1137
Query: 490 EARNFLDGDLIESFLDLNRSKMDEV--SKALDV 520
+ LDGD++ FL+L + + + + LDV
Sbjct: 1138 K---ILDGDMLTQFLELTNMQQNNILSMEPLDV 1167