Miyakogusa Predicted Gene

Lj0g3v0282189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0282189.1 Non Characterized Hit- tr|I1NER6|I1NER6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7248
PE=,82.73,0,HLH,Helix-loop-helix domain; NAI1, DNA BINDING /
TRANSCRIPTION FACTOR,NULL; CIRCADIAN PROTEIN CLOCK/,CUFF.18773.1
         (216 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g043430.1 | BHLH domain class transcription factor | HC | ...   306   9e-84
Medtr2g082640.1 | BHLH domain class transcription factor | HC | ...   161   5e-40
Medtr4g081370.1 | BHLH domain class transcription factor | HC | ...   156   1e-38
Medtr4g081370.2 | BHLH domain class transcription factor | HC | ...   155   3e-38
Medtr2g089000.1 | BHLH domain class transcription factor | HC | ...   136   1e-32
Medtr4g075480.2 | transcription factor | HC | chr4:28837847-2884...    69   4e-12
Medtr4g075480.1 | transcription factor | HC | chr4:28837847-2884...    69   4e-12
Medtr4g075480.3 | transcription factor | HC | chr4:28837847-2884...    68   7e-12
Medtr1g032600.1 | transcription factor | HC | chr1:11621022-1162...    64   1e-10
Medtr1g032600.2 | transcription factor | HC | chr1:11621022-1162...    64   1e-10
Medtr4g108360.1 | BHLH transcription factor | HC | chr4:44950290...    50   2e-06

>Medtr1g043430.1 | BHLH domain class transcription factor | HC |
           chr1:16308113-16312292 | 20130731
          Length = 246

 Score =  306 bits (784), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 168/246 (68%), Positives = 182/246 (73%), Gaps = 30/246 (12%)

Query: 1   MDSLE---DSGCWDFL-DYS-FLDP-PPTDFLWSNPN----------------------Q 32
           MDSLE   ++   DFL DYS F+DP PPT FLWSN N                      +
Sbjct: 1   MDSLELLENTDYLDFLGDYSPFIDPSPPTHFLWSNSNPSVSTEFDISSNVVACQEENTRK 60

Query: 33  SVIAEADFPSVAVASQE-NTRKRGRTDSCCKAGTKACREKQRREKLNERFCELSSVLEPG 91
           SV  E D PS AV  QE NTRKRGRT+SC KAGTKACREK RREKLNERFC+LS+VLEPG
Sbjct: 61  SVSTETDIPSGAVVCQEENTRKRGRTESCYKAGTKACREKLRREKLNERFCDLSAVLEPG 120

Query: 92  RPVKTDKPAILDDAIRVLSQLKTEAQXXXXXXXXXXXXXXCLKAEKNELREEKLVLKADK 151
           RPV+TDKPAILDDAIRVLSQLKTEAQ              CLKAEKNELREEKLVLKADK
Sbjct: 121 RPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADK 180

Query: 152 ERIEKKLKALPVSAGGFL-PPPMAAYQPTVNKMAVYPNYGYIPMWQYLPSSARDTSHDHE 210
           E+IEK+LK++PVS  GF+ PPPMAAYQ +VNKMAVYPNYGYIPMW YLP SARDTS DHE
Sbjct: 181 EKIEKQLKSMPVSPAGFMPPPPMAAYQASVNKMAVYPNYGYIPMWHYLPQSARDTSQDHE 240

Query: 211 LRPPAA 216
           LRPPAA
Sbjct: 241 LRPPAA 246


>Medtr2g082640.1 | BHLH domain class transcription factor | HC |
           chr2:34669163-34671763 | 20130731
          Length = 230

 Score =  161 bits (407), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/223 (43%), Positives = 133/223 (59%), Gaps = 17/223 (7%)

Query: 10  WDFLDYSFLDPPPTD------FLWSNPNQSVIA-EADFPSVAVAS---QENTRKRGRTDS 59
           W F DY  +D  P        F W  P+ S    E D  S+  +    +  ++KRGR+DS
Sbjct: 9   WLF-DYPLIDEIPVSVDGSFAFTWPPPHLSNGGIEMDDSSLVDSDGIKEPGSKKRGRSDS 67

Query: 60  CCKAGTKACREKQRREKLNERFCELSSVLEPGRPVKTDKPAILDDAIRVLSQLKTEAQXX 119
           C  + +KACREK RR++LN++F EL S+LEPGRP KTDK AIL DA+R+++QL+ EAQ  
Sbjct: 68  CAPSSSKACREKLRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVTQLRGEAQKL 127

Query: 120 XXXXXXXXXXXXCLKAEKNELREEKLVLKADKERIEKKLKALPVSAGGFLPPPM--AAY- 176
                        LK EKNELR+EK  LKA+KE++E+++K++    G    PP   AA+ 
Sbjct: 128 KDSNSGLQEKIKELKVEKNELRDEKQRLKAEKEKLEQQVKSMNTQPGFLTHPPAIPAAFA 187

Query: 177 ---QPTVNKMAVYPNYGYIPMWQYLPSSARDTSHDHELRPPAA 216
              Q   NK+  + +Y  + MWQ++P +A DTS DH LRPP A
Sbjct: 188 HQGQAPSNKLMPFMSYPGVAMWQFMPPAAVDTSQDHVLRPPVA 230


>Medtr4g081370.1 | BHLH domain class transcription factor | HC |
           chr4:31541350-31537381 | 20130731
          Length = 237

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 130/227 (57%), Gaps = 25/227 (11%)

Query: 14  DYSFLDP----------PPTDFLWS-----NPNQSVIAEAD--FPSVAVASQENTRKRGR 56
           DY F D           P + F W      N + +V AE D          +  ++KR R
Sbjct: 12  DYGFYDDIPVPDSTFALPSSAFTWPTQPPFNLSSNVSAEVDGSLGDSDGLKESGSKKRVR 71

Query: 57  TDSCCKAGTKACREKQRREKLNERFCELSSVLEPGRPVKTDKPAILDDAIRVLSQLKTEA 116
           ++SC    +KACREK RR++LN++F EL S+LEPGRP KTDK AIL DA+R+++QL+ EA
Sbjct: 72  SESCAATSSKACREKLRRDRLNDKFIELGSILEPGRPAKTDKAAILIDAVRMVTQLRGEA 131

Query: 117 QXXXXXXXXXXXXXXCLKAEKNELREEKLVLKADKERIEKKLKALPVSAGGFLPPPM--- 173
           Q               LK EKNELR+EK  LKA+KE++E++LK++      FLP P    
Sbjct: 132 QKLKDANSGLQEKIKELKVEKNELRDEKQRLKAEKEKLEQQLKSMNAPP-SFLPTPTALP 190

Query: 174 AAY----QPTVNKMAVYPNYGYIPMWQYLPSSARDTSHDHELRPPAA 216
           AA+    Q   NK+  + +Y  + MWQ++P +A DTS DH LRPP A
Sbjct: 191 AAFAAQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA 237


>Medtr4g081370.2 | BHLH domain class transcription factor | HC |
           chr4:31541177-31537807 | 20130731
          Length = 193

 Score =  155 bits (391), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/176 (46%), Positives = 113/176 (64%), Gaps = 8/176 (4%)

Query: 48  QENTRKRGRTDSCCKAGTKACREKQRREKLNERFCELSSVLEPGRPVKTDKPAILDDAIR 107
           +  ++KR R++SC    +KACREK RR++LN++F EL S+LEPGRP KTDK AIL DA+R
Sbjct: 19  ESGSKKRVRSESCAATSSKACREKLRRDRLNDKFIELGSILEPGRPAKTDKAAILIDAVR 78

Query: 108 VLSQLKTEAQXXXXXXXXXXXXXXCLKAEKNELREEKLVLKADKERIEKKLKALPVSAGG 167
           +++QL+ EAQ               LK EKNELR+EK  LKA+KE++E++LK++      
Sbjct: 79  MVTQLRGEAQKLKDANSGLQEKIKELKVEKNELRDEKQRLKAEKEKLEQQLKSMNAPP-S 137

Query: 168 FLPPPM-------AAYQPTVNKMAVYPNYGYIPMWQYLPSSARDTSHDHELRPPAA 216
           FLP P        A  Q   NK+  + +Y  + MWQ++P +A DTS DH LRPP A
Sbjct: 138 FLPTPTALPAAFAAQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA 193


>Medtr2g089000.1 | BHLH domain class transcription factor | HC |
           chr2:37541705-37539428 | 20130731
          Length = 260

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/205 (42%), Positives = 120/205 (58%), Gaps = 9/205 (4%)

Query: 13  LDYSFLDPPPTDFLWSNPNQSVIAEADFPSVAVASQENTRKRGRTDSCCKAGTKACREKQ 72
           +DYS      +  + SNP++ +  E    S  +  +    KR RT+S   + +KA REK 
Sbjct: 64  MDYSL----DSTVMESNPSKRMEMEYSLDSTVL--ENGPSKRLRTESYA-SSSKAGREKV 116

Query: 73  RREKLNERFCELSSVLEPGRPVKTDKPAILDDAIRVLSQLKTEAQXXXXXXXXXXXXXXC 132
           RR+KLN+RF ELSSVLEP    KTDK ++L+DA+RV++QL+ EA+               
Sbjct: 117 RRDKLNDRFMELSSVLEPDTLPKTDKVSLLNDAVRVVTQLRNEAERLKERNDELREKVKE 176

Query: 133 LKAEKNELREEKLVLKADKERIEKKLKALPVSAGGFLPPPMAAYQPTVN-KMAVYPNYGY 191
           LKAEK ELR+EK  LK DKE++E+++K   V +  FL   MAA   T N K+  +  Y  
Sbjct: 177 LKAEKKELRDEKNKLKLDKEKLEQQVKLASVQS-NFLSNAMAAKGQTANHKLMPFIGYPG 235

Query: 192 IPMWQYLPSSARDTSHDHELRPPAA 216
           I MWQ++  +  DTS DH LRPP A
Sbjct: 236 ISMWQFMSPATVDTSQDHLLRPPVA 260


>Medtr4g075480.2 | transcription factor | HC |
           chr4:28837847-28840939 | 20130731
          Length = 282

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 66  KACREKQRREKLNERFCELSSVLEPGRPVKTDKPAILDDAIRVLSQLKTEAQXXXXXXXX 125
           KA REK RR++LNE+F EL ++L+P RP K DK  IL D +++L  L ++          
Sbjct: 11  KADREKLRRDRLNEQFLELGNILDPDRP-KNDKATILGDTVQLLKDLSSQVSKLKDEYTM 69

Query: 126 XXXXXXCLKAEKNELREEKLVLKADKERIEKKLK 159
                  L  EKN+LREEK  LK+D E +  + +
Sbjct: 70  LNEESRELSQEKNDLREEKASLKSDIENLNNQYQ 103


>Medtr4g075480.1 | transcription factor | HC |
           chr4:28837847-28840939 | 20130731
          Length = 282

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 66  KACREKQRREKLNERFCELSSVLEPGRPVKTDKPAILDDAIRVLSQLKTEAQXXXXXXXX 125
           KA REK RR++LNE+F EL ++L+P RP K DK  IL D +++L  L ++          
Sbjct: 11  KADREKLRRDRLNEQFLELGNILDPDRP-KNDKATILGDTVQLLKDLSSQVSKLKDEYTM 69

Query: 126 XXXXXXCLKAEKNELREEKLVLKADKERIEKKLK 159
                  L  EKN+LREEK  LK+D E +  + +
Sbjct: 70  LNEESRELSQEKNDLREEKASLKSDIENLNNQYQ 103


>Medtr4g075480.3 | transcription factor | HC |
           chr4:28837847-28840939 | 20130731
          Length = 310

 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 66  KACREKQRREKLNERFCELSSVLEPGRPVKTDKPAILDDAIRVLSQLKTEAQXXXXXXXX 125
           KA REK RR++LNE+F EL ++L+P RP K DK  IL D +++L  L ++          
Sbjct: 39  KADREKLRRDRLNEQFLELGNILDPDRP-KNDKATILGDTVQLLKDLSSQVSKLKDEYTM 97

Query: 126 XXXXXXCLKAEKNELREEKLVLKADKERIEKKLK 159
                  L  EKN+LREEK  LK+D E +  + +
Sbjct: 98  LNEESRELSQEKNDLREEKASLKSDIENLNNQYQ 131


>Medtr1g032600.1 | transcription factor | HC |
           chr1:11621022-11623661 | 20130731
          Length = 355

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 38/169 (22%)

Query: 66  KACREKQRREKLNERFCELSSVLEPGRPVKTDKPAILDDAIRVLSQLKTEAQXXXXXXXX 125
           KA REK RR++LN+ F +L +V++P RP + DK  I+ + I+VL  + +E          
Sbjct: 82  KADREKIRRDRLNDHFHQLGTVIDPDRP-RNDKATIITETIQVLKDITSEVDRLKTEHKS 140

Query: 126 XXXXXXCLKAEKNELREEKLVLKADKERIEKKLKA------------------------- 160
                  L  EK ELREEK  LK+D E +  + +                          
Sbjct: 141 LSEESRELIQEKTELREEKASLKSDIENLNSQYQQRVGVMPPWTAIDHSVVMSSPYTYPV 200

Query: 161 ---LPVSAG--GFLPPPMAAYQPTVNKMAVYPNYGYIPMWQ--YLPSSA 202
              +P+ AG     PPPM  +    N+     N G+IP     Y+P SA
Sbjct: 201 PMPMPIPAGPVSIHPPPMQPFPYFGNQ-----NPGHIPSLSSMYIPFSA 244


>Medtr1g032600.2 | transcription factor | HC |
           chr1:11621022-11623661 | 20130731
          Length = 355

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 38/169 (22%)

Query: 66  KACREKQRREKLNERFCELSSVLEPGRPVKTDKPAILDDAIRVLSQLKTEAQXXXXXXXX 125
           KA REK RR++LN+ F +L +V++P RP + DK  I+ + I+VL  + +E          
Sbjct: 82  KADREKIRRDRLNDHFHQLGTVIDPDRP-RNDKATIITETIQVLKDITSEVDRLKTEHKS 140

Query: 126 XXXXXXCLKAEKNELREEKLVLKADKERIEKKLKA------------------------- 160
                  L  EK ELREEK  LK+D E +  + +                          
Sbjct: 141 LSEESRELIQEKTELREEKASLKSDIENLNSQYQQRVGVMPPWTAIDHSVVMSSPYTYPV 200

Query: 161 ---LPVSAG--GFLPPPMAAYQPTVNKMAVYPNYGYIPMWQ--YLPSSA 202
              +P+ AG     PPPM  +    N+     N G+IP     Y+P SA
Sbjct: 201 PMPMPIPAGPVSIHPPPMQPFPYFGNQ-----NPGHIPSLSSMYIPFSA 244


>Medtr4g108360.1 | BHLH transcription factor | HC |
           chr4:44950290-44948517 | 20130731
          Length = 246

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 51  TRKRGRTDSCCKAGTKACREKQRREKLNERFCELSSVLEPGRPVKTDKPAILDDAIRVLS 110
           T K+G+     K   KA REK +RE LNE F +L++ L+   P    K +IL +A R+L 
Sbjct: 43  TMKQGK---VPKRIHKAEREKMKREHLNELFLDLANALDLSEP-NNGKASILIEASRLLK 98

Query: 111 QLKTEAQXXXXXXXXXXXXXXCLKAEKNELREEKLVLKADKERIEKKLKA 160
            L  + Q               +  EKNEL+EE   L+   E+++ +++A
Sbjct: 99  DLLCQIQSLKKENVSLLSESHYVTMEKNELKEENSSLETQIEKLQGEIQA 148